RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 POLKQ9UBT6 870 aa20.44■□□□□ 0.86
SMIM11A-203ENST00000399299 KIF7Q2M1P5 1343 aa20.44■□□□□ 0.86
SMIM11A-203ENST00000399299 KAT6BQ8WYB5 2073 aa20.44■□□□□ 0.86
SMIM11A-203ENST00000399299 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
SMIM11A-203ENST00000399299 RAPGEF4Q8WZA2 1011 aa20.43■□□□□ 0.86
SMIM11A-203ENST00000399299 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
SMIM11A-203ENST00000399299 PROM2Q8N271 834 aa20.42■□□□□ 0.86
SMIM11A-203ENST00000399299 DDX54Q8TDD1 881 aaKnown RBP20.42■□□□□ 0.86
SMIM11A-203ENST00000399299 ACSBG1Q96GR2 724 aa20.42■□□□□ 0.86
SMIM11A-203ENST00000399299 PKD1L3Q7Z443 1732 aa20.41■□□□□ 0.86
SMIM11A-203ENST00000399299 PPM1GO15355 546 aaPredicted RBP20.41■□□□□ 0.86
SMIM11A-203ENST00000399299 TATP17735 454 aaPredicted RBP20.4■□□□□ 0.86
SMIM11A-203ENST00000399299 TXNRD1Q16881 649 aa20.4■□□□□ 0.86
SMIM11A-203ENST00000399299 KNSTRNQ9Y448 316 aa20.4■□□□□ 0.86
SMIM11A-203ENST00000399299 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
SMIM11A-203ENST00000399299 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
SMIM11A-203ENST00000399299 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
SMIM11A-203ENST00000399299 PLEKHG2Q9H7P9 1386 aa20.36■□□□□ 0.85
SMIM11A-203ENST00000399299 PAPPAQ13219 1627 aa20.36■□□□□ 0.85
SMIM11A-203ENST00000399299 MORC1Q86VD1 984 aa20.36■□□□□ 0.85
SMIM11A-203ENST00000399299 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
SMIM11A-203ENST00000399299 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
SMIM11A-203ENST00000399299 AMER1Q5JTC6 1135 aaPredicted RBP20.35■□□□□ 0.85
SMIM11A-203ENST00000399299 EYA1Q99502 592 aa20.35■□□□□ 0.85
SMIM11A-203ENST00000399299 LY75O60449 1722 aa20.34■□□□□ 0.85
SMIM11A-203ENST00000399299 EIF4A2Q14240 407 aaKnown RBP20.34■□□□□ 0.85
SMIM11A-203ENST00000399299 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
SMIM11A-203ENST00000399299 PRIM1P49642 420 aaKnown RBP20.32■□□□□ 0.84
SMIM11A-203ENST00000399299 CYP27B1O15528 508 aa20.31■□□□□ 0.84
SMIM11A-203ENST00000399299 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
SMIM11A-203ENST00000399299 STK32BQ9NY57 414 aa20.31■□□□□ 0.84
SMIM11A-203ENST00000399299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMIM11A-203ENST00000399299 TOGARAM1Q9Y4F4 1720 aa20.3■□□□□ 0.84
SMIM11A-203ENST00000399299 IGSF1Q8N6C5 1336 aa20.3■□□□□ 0.84
SMIM11A-203ENST00000399299 SLC15A2Q16348 729 aa20.3■□□□□ 0.84
SMIM11A-203ENST00000399299 SPG7Q9UQ90 795 aa20.3■□□□□ 0.84
SMIM11A-203ENST00000399299 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
SMIM11A-203ENST00000399299 QSER1Q2KHR3 1735 aa20.28■□□□□ 0.84
SMIM11A-203ENST00000399299 ITGB4P16144 1822 aa20.28■□□□□ 0.84
SMIM11A-203ENST00000399299 NPC1L1Q9UHC9 1359 aa20.28■□□□□ 0.84
SMIM11A-203ENST00000399299 NKX1-1Q15270 411 aaPredicted RBP20.27■□□□□ 0.84
SMIM11A-203ENST00000399299 SPON1Q9HCB6 807 aa20.27■□□□□ 0.84
SMIM11A-203ENST00000399299 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
SMIM11A-203ENST00000399299 KDRP35968 1356 aa20.22■□□□□ 0.83
SMIM11A-203ENST00000399299 IFNL2Q8IZJ0 200 aa20.22■□□□□ 0.83
SMIM11A-203ENST00000399299 PDGFDQ9GZP0 370 aaPredicted RBP20.22■□□□□ 0.83
SMIM11A-203ENST00000399299 TUBGCP6Q96RT7 1819 aa20.21■□□□□ 0.83
SMIM11A-203ENST00000399299 PHKG2P15735 406 aa20.21■□□□□ 0.83
SMIM11A-203ENST00000399299 ZNF827Q17R98 1081 aa20.21■□□□□ 0.83
SMIM11A-203ENST00000399299 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
SMIM11A-203ENST00000399299 C5P01031 1676 aa20.2■□□□□ 0.82
SMIM11A-203ENST00000399299 IL13P35225 146 aa20.2■□□□□ 0.82
SMIM11A-203ENST00000399299 CC2D1BQ5T0F9 858 aaKnown RBP20.2■□□□□ 0.82
SMIM11A-203ENST00000399299 MPRIPQ6WCQ1 1025 aa20.2■□□□□ 0.82
SMIM11A-203ENST00000399299 CCNL1Q9UK58 526 aaPredicted RBP20.2■□□□□ 0.82
SMIM11A-203ENST00000399299 TAF1LQ8IZX4 1826 aa20.19■□□□□ 0.82
SMIM11A-203ENST00000399299 HMGB2P26583 209 aaKnown RBP20.19■□□□□ 0.82
SMIM11A-203ENST00000399299 MTHFSP49914 203 aa20.19■□□□□ 0.82
SMIM11A-203ENST00000399299 PALLDQ8WX93 1383 aa20.19■□□□□ 0.82
SMIM11A-203ENST00000399299 AMOTQ4VCS5 1084 aa20.18■□□□□ 0.82
SMIM11A-203ENST00000399299 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
SMIM11A-203ENST00000399299 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
SMIM11A-203ENST00000399299 ZBTB7AO95365 584 aa20.17■□□□□ 0.82
SMIM11A-203ENST00000399299 AEBP1Q8IUX7 1158 aa20.17■□□□□ 0.82
SMIM11A-203ENST00000399299 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
SMIM11A-203ENST00000399299 HSP90AB1P08238 724 aaKnown RBP20.16■□□□□ 0.82
SMIM11A-203ENST00000399299 KCNQ4P56696 695 aa20.16■□□□□ 0.82
SMIM11A-203ENST00000399299 PIGBQ92521 554 aa20.16■□□□□ 0.82
SMIM11A-203ENST00000399299 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
SMIM11A-203ENST00000399299 PTGER2P43116 358 aa20.15■□□□□ 0.82
SMIM11A-203ENST00000399299 SULT6B1Q6IMI4 303 aa20.15■□□□□ 0.82
SMIM11A-203ENST00000399299 TMOD3Q9NYL9 352 aa20.15■□□□□ 0.82
SMIM11A-203ENST00000399299 COL24A1Q17RW2 1714 aa20.15■□□□□ 0.82
SMIM11A-203ENST00000399299 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.81
SMIM11A-203ENST00000399299 SLC16A10Q8TF71 515 aa20.14■□□□□ 0.81
SMIM11A-203ENST00000399299 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
SMIM11A-203ENST00000399299 PNPLA7Q6ZV29 1317 aa20.13■□□□□ 0.81
SMIM11A-203ENST00000399299 ZNF530Q6P9A1 599 aaPredicted RBP20.13■□□□□ 0.81
SMIM11A-203ENST00000399299 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
SMIM11A-203ENST00000399299 ATF5Q9Y2D1 282 aaPredicted RBP20.13■□□□□ 0.81
SMIM11A-203ENST00000399299 ERVV-2B6SEH9 535 aa20.12■□□□□ 0.81
SMIM11A-203ENST00000399299 DIAPH1O60610 1272 aaKnown RBP20.12■□□□□ 0.81
SMIM11A-203ENST00000399299 SGIP1Q9BQI5 828 aa20.12■□□□□ 0.81
SMIM11A-203ENST00000399299 C4BP0C0L5 1744 aa20.12■□□□□ 0.81
SMIM11A-203ENST00000399299 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
SMIM11A-203ENST00000399299 ZNF831Q5JPB2 1677 aa20.11■□□□□ 0.81
SMIM11A-203ENST00000399299 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
SMIM11A-203ENST00000399299 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
SMIM11A-203ENST00000399299 UBR3Q6ZT12 1888 aa20.08■□□□□ 0.81
SMIM11A-203ENST00000399299 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
SMIM11A-203ENST00000399299 SIK1P57059 783 aa20.08■□□□□ 0.81
SMIM11A-203ENST00000399299 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
SMIM11A-203ENST00000399299 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
SMIM11A-203ENST00000399299 HMOX1P09601 288 aa20.06■□□□□ 0.8
SMIM11A-203ENST00000399299 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
SMIM11A-203ENST00000399299 FLAD1Q8NFF5 587 aa20.06■□□□□ 0.8
SMIM11A-203ENST00000399299 ATG3Q9NT62 314 aa20.06■□□□□ 0.8
SMIM11A-203ENST00000399299 AKAP4Q5JQC9 854 aa20.05■□□□□ 0.8
SMIM11A-203ENST00000399299 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
SMIM11A-203ENST00000399299 CABP4P57796 275 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms