RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
APOB-202ENST00000399256 TNRQ92752 1358 aa17.2■□□□□ 0.34
APOB-202ENST00000399256 GNAI1P63096 354 aa17.19■□□□□ 0.34
APOB-202ENST00000399256 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
APOB-202ENST00000399256 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
APOB-202ENST00000399256 A2ML1A8K2U0 1454 aa17.19■□□□□ 0.34
APOB-202ENST00000399256 PDLIM2Q96JY6 352 aa17.19■□□□□ 0.34
APOB-202ENST00000399256 HS1BP3Q53T59 392 aa17.18■□□□□ 0.34
APOB-202ENST00000399256 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
APOB-202ENST00000399256 IFT57Q9NWB7 429 aa17.18■□□□□ 0.34
APOB-202ENST00000399256 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
APOB-202ENST00000399256 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
APOB-202ENST00000399256 ZDHHC9Q9Y397 364 aa17.18■□□□□ 0.34
APOB-202ENST00000399256 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
APOB-202ENST00000399256 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
APOB-202ENST00000399256 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
APOB-202ENST00000399256 SYCE3A1L190 88 aa17.17■□□□□ 0.34
APOB-202ENST00000399256 SMARCA5O60264 1052 aaPredicted RBP17.17■□□□□ 0.34
APOB-202ENST00000399256 ST18O60284 1047 aa17.17■□□□□ 0.34
APOB-202ENST00000399256 ZNF500O60304 480 aaPredicted RBP17.17■□□□□ 0.34
APOB-202ENST00000399256 NSFL1CQ9UNZ2 370 aaKnown RBP17.17■□□□□ 0.34
APOB-202ENST00000399256 UQCRHLA0A096LP55 91 aa17.16■□□□□ 0.34
APOB-202ENST00000399256 UQCRHP07919 91 aa17.16■□□□□ 0.34
APOB-202ENST00000399256 SDSP20132 328 aa17.16■□□□□ 0.34
APOB-202ENST00000399256 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
APOB-202ENST00000399256 TMEM63CQ9P1W3 806 aa17.16■□□□□ 0.34
APOB-202ENST00000399256 TERF1P54274 439 aa17.16■□□□□ 0.34
APOB-202ENST00000399256 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
APOB-202ENST00000399256 ARID3AQ99856 593 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 ZKSCAN5Q9Y2L8 839 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
APOB-202ENST00000399256 RNF214Q8ND24 703 aa17.14■□□□□ 0.34
APOB-202ENST00000399256 ADAMTSL3P82987 1691 aa17.14■□□□□ 0.33
APOB-202ENST00000399256 PTPRMP28827 1452 aa17.14■□□□□ 0.33
APOB-202ENST00000399256 LRSAM1Q6UWE0 723 aa17.14■□□□□ 0.33
APOB-202ENST00000399256 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
APOB-202ENST00000399256 RIMS1Q86UR5 1692 aaKnown RBP17.14■□□□□ 0.33
APOB-202ENST00000399256 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
APOB-202ENST00000399256 CASC1Q6TDU7 716 aa17.14■□□□□ 0.33
APOB-202ENST00000399256 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
APOB-202ENST00000399256 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
APOB-202ENST00000399256 YTHDC2Q9H6S0 1430 aaKnown RBP17.12■□□□□ 0.33
APOB-202ENST00000399256 KIF20BQ96Q89 1820 aa17.11■□□□□ 0.33
APOB-202ENST00000399256 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
APOB-202ENST00000399256 ZBTB7CA1YPR0 619 aa17.11■□□□□ 0.33
APOB-202ENST00000399256 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
APOB-202ENST00000399256 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
APOB-202ENST00000399256 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
APOB-202ENST00000399256 REC8O95072 547 aa17.1■□□□□ 0.33
APOB-202ENST00000399256 KRT24Q2M2I5 525 aa17.1■□□□□ 0.33
APOB-202ENST00000399256 IL13P35225 146 aa17.09■□□□□ 0.33
APOB-202ENST00000399256 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
APOB-202ENST00000399256 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.33
APOB-202ENST00000399256 ERC2O15083 957 aa17.08■□□□□ 0.32
APOB-202ENST00000399256 NEK4P51957 841 aa17.08■□□□□ 0.32
APOB-202ENST00000399256 MAP7D2Q96T17 732 aa17.08■□□□□ 0.32
APOB-202ENST00000399256 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
APOB-202ENST00000399256 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
APOB-202ENST00000399256 FOXD4L6Q3SYB3 417 aaPredicted RBP17.07■□□□□ 0.32
APOB-202ENST00000399256 FOXD4L3Q6VB84 417 aaPredicted RBP17.07■□□□□ 0.32
APOB-202ENST00000399256 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
APOB-202ENST00000399256 MSH6P52701 1360 aa17.07■□□□□ 0.32
APOB-202ENST00000399256 KIF24Q5T7B8 1368 aa17.07■□□□□ 0.32
APOB-202ENST00000399256 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
APOB-202ENST00000399256 MEIS3Q99687 375 aa17.07■□□□□ 0.32
APOB-202ENST00000399256 ZRANB1Q9UGI0 708 aa17.07■□□□□ 0.32
APOB-202ENST00000399256 MCM5P33992 734 aa17.06■□□□□ 0.32
APOB-202ENST00000399256 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
APOB-202ENST00000399256 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
APOB-202ENST00000399256 MBD3O95983 291 aa17.05■□□□□ 0.32
APOB-202ENST00000399256 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
APOB-202ENST00000399256 SASS6Q6UVJ0 657 aa17.05■□□□□ 0.32
APOB-202ENST00000399256 NME9Q86XW9 330 aa17.05■□□□□ 0.32
APOB-202ENST00000399256 MPNDQ8N594 471 aa17.05■□□□□ 0.32
APOB-202ENST00000399256 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
APOB-202ENST00000399256 DYNC1I1O14576 645 aa17.05■□□□□ 0.32
APOB-202ENST00000399256 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
APOB-202ENST00000399256 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
APOB-202ENST00000399256 TSPY26PQ9H489 355 aa17.04■□□□□ 0.32
APOB-202ENST00000399256 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
APOB-202ENST00000399256 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
APOB-202ENST00000399256 RGS12O14924 1447 aa17.04■□□□□ 0.32
APOB-202ENST00000399256 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
APOB-202ENST00000399256 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
APOB-202ENST00000399256 BRD1O95696 1058 aa17.03■□□□□ 0.32
APOB-202ENST00000399256 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
APOB-202ENST00000399256 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
APOB-202ENST00000399256 GDPD2Q9HCC8 539 aa17.03■□□□□ 0.32
APOB-202ENST00000399256 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.03■□□□□ 0.32
APOB-202ENST00000399256 PRDM4Q9UKN5 801 aa17.02■□□□□ 0.31
APOB-202ENST00000399256 PALD1Q9ULE6 856 aa17.01■□□□□ 0.31
APOB-202ENST00000399256 PDE1AP54750 535 aa17.01■□□□□ 0.31
APOB-202ENST00000399256 KIAA2012Q0VF49 1180 aa17.01■□□□□ 0.31
APOB-202ENST00000399256 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
APOB-202ENST00000399256 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms