RNA–Protein interactions for RNA: ENST00000399158.2

MED28P1-201, Transcript of mediator complex subunit 28 pseudogene 1, humanhuman

BASIC

Gene MED28P1, Length 571 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P1-201ENST00000399158 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
MED28P1-201ENST00000399158 ANKRD24Q8TF21 1146 aa11.31□□□□□ -0.6
MED28P1-201ENST00000399158 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
MED28P1-201ENST00000399158 CRB1P82279 1406 aa11.31□□□□□ -0.6
MED28P1-201ENST00000399158 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
MED28P1-201ENST00000399158 GNAI1P63096 354 aa11.3□□□□□ -0.6
MED28P1-201ENST00000399158 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
MED28P1-201ENST00000399158 C20orf194Q5TEA3 1177 aa11.3□□□□□ -0.6
MED28P1-201ENST00000399158 GAS2L2Q8NHY3 880 aa11.3□□□□□ -0.6
MED28P1-201ENST00000399158 EXOC6Q8TAG9 804 aa11.3□□□□□ -0.6
MED28P1-201ENST00000399158 CFAP44Q96MT7 982 aa11.3□□□□□ -0.6
MED28P1-201ENST00000399158 HTATSF1O43719 755 aaKnown RBP11.29□□□□□ -0.6
MED28P1-201ENST00000399158 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
MED28P1-201ENST00000399158 ERBB3P21860 1342 aa11.29□□□□□ -0.6
MED28P1-201ENST00000399158 KIAA0232Q92628 1395 aa11.28□□□□□ -0.6
MED28P1-201ENST00000399158 COL22A1Q8NFW1 1626 aaPredicted RBP11.28□□□□□ -0.6
MED28P1-201ENST00000399158 CHL1O00533 1208 aa11.28□□□□□ -0.6
MED28P1-201ENST00000399158 MCM10Q7L590 875 aa11.28□□□□□ -0.6
MED28P1-201ENST00000399158 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
MED28P1-201ENST00000399158 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
MED28P1-201ENST00000399158 CRBNQ96SW2 442 aa11.27□□□□□ -0.61
MED28P1-201ENST00000399158 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.61
MED28P1-201ENST00000399158 GNAT3A8MTJ3 354 aa11.26□□□□□ -0.61
MED28P1-201ENST00000399158 VAMP4O75379 141 aa11.26□□□□□ -0.61
MED28P1-201ENST00000399158 CHRNA2Q15822 529 aa11.26□□□□□ -0.61
MED28P1-201ENST00000399158 LAS1LQ9Y4W2 734 aaKnown RBP11.26□□□□□ -0.61
MED28P1-201ENST00000399158 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
MED28P1-201ENST00000399158 COL16A1Q07092 1604 aaPredicted RBP11.25□□□□□ -0.61
MED28P1-201ENST00000399158 PDE3AQ14432 1141 aa11.25□□□□□ -0.61
MED28P1-201ENST00000399158 B4GALNT3Q6L9W6 998 aa11.25□□□□□ -0.61
MED28P1-201ENST00000399158 TSPYL6Q8N831 410 aa11.25□□□□□ -0.61
MED28P1-201ENST00000399158 C8orf58Q8NAV2 365 aa11.25□□□□□ -0.61
MED28P1-201ENST00000399158 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
MED28P1-201ENST00000399158 SSH1Q8WYL5 1049 aa11.25□□□□□ -0.61
MED28P1-201ENST00000399158 BRPF1P55201 1214 aaPredicted RBP11.24□□□□□ -0.61
MED28P1-201ENST00000399158 ALDH1L2Q3SY69 923 aa11.24□□□□□ -0.61
MED28P1-201ENST00000399158 ZNF428Q96B54 188 aa11.24□□□□□ -0.61
MED28P1-201ENST00000399158 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
MED28P1-201ENST00000399158 CEMIPQ8WUJ3 1361 aa11.24□□□□□ -0.61
MED28P1-201ENST00000399158 PLEKHG2Q9H7P9 1386 aa11.24□□□□□ -0.61
MED28P1-201ENST00000399158 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
MED28P1-201ENST00000399158 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
MED28P1-201ENST00000399158 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
MED28P1-201ENST00000399158 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
MED28P1-201ENST00000399158 PLEKHO1Q53GL0 409 aaPredicted RBP11.23□□□□□ -0.61
MED28P1-201ENST00000399158 RTF1Q92541 710 aaKnown RBP11.23□□□□□ -0.61
MED28P1-201ENST00000399158 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
MED28P1-201ENST00000399158 COL5A2P05997 1499 aaPredicted RBP11.23□□□□□ -0.61
MED28P1-201ENST00000399158 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
MED28P1-201ENST00000399158 MEGF6O75095 1541 aa11.22□□□□□ -0.61
MED28P1-201ENST00000399158 BCL2L13Q9BXK5 485 aa11.22□□□□□ -0.61
MED28P1-201ENST00000399158 PRDM11Q9NQV5 511 aa11.22□□□□□ -0.61
MED28P1-201ENST00000399158 BABAM1Q9NWV8 329 aa11.22□□□□□ -0.61
MED28P1-201ENST00000399158 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.61
MED28P1-201ENST00000399158 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 WDR17Q8IZU2 1322 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.61
MED28P1-201ENST00000399158 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 MRPL50Q8N5N7 158 aaKnown RBP11.21□□□□□ -0.61
MED28P1-201ENST00000399158 PANK1Q8TE04 598 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 LGR6Q9HBX8 967 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 SMC4Q9NTJ3 1288 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 NLRP2Q9NX02 1062 aa11.21□□□□□ -0.61
MED28P1-201ENST00000399158 RLBP1P12271 317 aa11.2□□□□□ -0.62
MED28P1-201ENST00000399158 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
MED28P1-201ENST00000399158 KRT24Q2M2I5 525 aa11.2□□□□□ -0.62
MED28P1-201ENST00000399158 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
MED28P1-201ENST00000399158 ZNF530Q6P9A1 599 aaPredicted RBP11.2□□□□□ -0.62
MED28P1-201ENST00000399158 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
MED28P1-201ENST00000399158 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
MED28P1-201ENST00000399158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
MED28P1-201ENST00000399158 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
MED28P1-201ENST00000399158 PARP4Q9UKK3 1724 aaKnown RBP11.2□□□□□ -0.62
MED28P1-201ENST00000399158 SHANK3Q9BYB0 1731 aa11.19□□□□□ -0.62
MED28P1-201ENST00000399158 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
MED28P1-201ENST00000399158 ELL2O00472 640 aaPredicted RBP11.19□□□□□ -0.62
MED28P1-201ENST00000399158 RNMTO43148 476 aaKnown RBP11.19□□□□□ -0.62
MED28P1-201ENST00000399158 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
MED28P1-201ENST00000399158 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
MED28P1-201ENST00000399158 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
MED28P1-201ENST00000399158 TOM1O60784 492 aa11.18□□□□□ -0.62
MED28P1-201ENST00000399158 TRIM27P14373 513 aa11.18□□□□□ -0.62
MED28P1-201ENST00000399158 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
MED28P1-201ENST00000399158 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
MED28P1-201ENST00000399158 ATF7IPQ6VMQ6 1270 aa11.18□□□□□ -0.62
MED28P1-201ENST00000399158 RAPGEF4Q8WZA2 1011 aa11.18□□□□□ -0.62
MED28P1-201ENST00000399158 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
MED28P1-201ENST00000399158 CANXP27824 592 aaKnown RBP11.17□□□□□ -0.62
MED28P1-201ENST00000399158 MPRIPQ6WCQ1 1025 aa11.17□□□□□ -0.62
MED28P1-201ENST00000399158 ARHGAP45Q92619 1136 aa11.17□□□□□ -0.62
MED28P1-201ENST00000399158 CARD10Q9BWT7 1032 aa11.17□□□□□ -0.62
MED28P1-201ENST00000399158 COG6Q9Y2V7 657 aa11.17□□□□□ -0.62
MED28P1-201ENST00000399158 KDM6AO15550 1401 aaPredicted RBP11.17□□□□□ -0.62
MED28P1-201ENST00000399158 MS4A1P11836 297 aa11.16□□□□□ -0.62
MED28P1-201ENST00000399158 PHKG2P15735 406 aa11.16□□□□□ -0.62
MED28P1-201ENST00000399158 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
MED28P1-201ENST00000399158 DZIP1LQ8IYY4 767 aaKnown RBP11.16□□□□□ -0.62
MED28P1-201ENST00000399158 SPG7Q9UQ90 795 aa11.16□□□□□ -0.62
MED28P1-201ENST00000399158 PLCH1Q4KWH8 1693 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms