RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 TBC1D2BQ9UPU7 963 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 PTPN23Q9H3S7 1636 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 MTMR7Q9Y216 660 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 POLR3GO15318 223 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-205ENST00000399050 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 PANK2Q9BZ23 570 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 ERLIN2O94905 339 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 ODF2Q5BJF6 829 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 PRAM1Q96QH2 718 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 CENPHQ9H3R5 247 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 DHX37Q8IY37 1157 aaKnown RBP10.16□□□□□ -0.78
CTNND1-205ENST00000399050 ZNF428Q96B54 188 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 FERMT3Q86UX7 667 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 SSH1Q8WYL5 1049 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
CTNND1-205ENST00000399050 CFAP100Q494V2 611 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 IQCEQ6IPM2 695 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 DDX11Q96FC9 970 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 KLHL40Q2TBA0 621 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 MAP3K1Q13233 1512 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 ANKRD30BQ9BXX2 1392 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 SFPQP23246 707 aaKnown RBP eCLIP10.16□□□□□ -0.781e-8■■■□□ 15.1
CTNND1-205ENST00000399050 PRIMPOLQ96LW4 560 aa10.16□□□□□ -0.78
CTNND1-205ENST00000399050 TRMT1Q9NXH9 659 aaKnown RBP10.16□□□□□ -0.78
CTNND1-205ENST00000399050 SRGAP3O43295 1099 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 CDK5RAP3Q96JB5 506 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 URI1O94763 535 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-205ENST00000399050 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 CDK19Q9BWU1 502 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 EPB41L2O43491 1005 aaKnown RBP10.15□□□□□ -0.78
CTNND1-205ENST00000399050 TBC1D9Q6ZT07 1266 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 ANO10Q9NW15 660 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 MX1P20591 662 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 GDPD2Q9HCC8 539 aa10.15□□□□□ -0.78
CTNND1-205ENST00000399050 ZSCAN12O43309 604 aa10.15□□□□□ -0.79
CTNND1-205ENST00000399050 ALDH1L2Q3SY69 923 aa10.15□□□□□ -0.79
CTNND1-205ENST00000399050 CCDC158Q5M9N0 1113 aa10.15□□□□□ -0.79
CTNND1-205ENST00000399050 ZFYVE27Q5T4F4 411 aa10.15□□□□□ -0.79
CTNND1-205ENST00000399050 CCDC148Q8NFR7 591 aa10.15□□□□□ -0.79
CTNND1-205ENST00000399050 STIM1Q13586 685 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 FCHSD2O94868 740 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 KRT32Q14532 448 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 LRSAM1Q6UWE0 723 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 CCDC43Q96MW1 224 aaKnown RBP10.14□□□□□ -0.79
CTNND1-205ENST00000399050 LRRFIP2Q9Y608 721 aaKnown RBP10.14□□□□□ -0.79
CTNND1-205ENST00000399050 GTF2F1P35269 517 aaKnown RBP eCLIP10.14□□□□□ -0.795e-6■■■□□ 17.8
CTNND1-205ENST00000399050 NFE2L2Q16236 605 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 CKAP2LQ8IYA6 745 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 GBP3Q9H0R5 595 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 NLRP6P59044 892 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 UVSSAQ2YD98 709 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 CABP1Q9NZU7 370 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 ARHGAP29Q52LW3 1261 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 TRIM22Q8IYM9 498 aa10.14□□□□□ -0.79
CTNND1-205ENST00000399050 GOLGA6L7A0A1B0GV03 622 aa10.13□□□□□ -0.79
CTNND1-205ENST00000399050 C8orf34Q49A92 452 aa10.13□□□□□ -0.79
CTNND1-205ENST00000399050 PRPF40BQ6NWY9 871 aaKnown RBP10.13□□□□□ -0.79
CTNND1-205ENST00000399050 KIAA1328Q86T90 577 aa10.13□□□□□ -0.79
CTNND1-205ENST00000399050 TXLNBQ8N3L3 684 aa10.13□□□□□ -0.79
CTNND1-205ENST00000399050 ZNF830Q96NB3 372 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-205ENST00000399050 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
CTNND1-205ENST00000399050 AQRO60306 1485 aaKnown RBP eCLIP10.13□□□□□ -0.792e-9■■■□□ 18.1
CTNND1-205ENST00000399050 GIMAP7Q8NHV1 300 aa10.13□□□□□ -0.79
CTNND1-205ENST00000399050 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.13□□□□□ -0.791e-7■■■□□ 16.3
CTNND1-205ENST00000399050 SCAND2PQ9GZW5 306 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-205ENST00000399050 TMX1Q9H3N1 280 aa10.13□□□□□ -0.79
CTNND1-205ENST00000399050 SHTN1A0MZ66 631 aa10.13□□□□□ -0.79
CTNND1-205ENST00000399050 SYTL4Q96C24 671 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-205ENST00000399050 CEP135Q66GS9 1140 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 PRG4Q92954 1404 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-205ENST00000399050 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
CTNND1-205ENST00000399050 TANGO6Q9C0B7 1094 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 NEMFO60524 1076 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 CDKL5O76039 1030 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 TRIM27P14373 513 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-205ENST00000399050 PLEKHO1Q53GL0 409 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-205ENST00000399050 CTDP1Q9Y5B0 961 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-205ENST00000399050 KIF5CO60282 957 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 BMP2KLQ5H9B9 411 aa10.12□□□□□ -0.79
CTNND1-205ENST00000399050 THUMPD2Q9BTF0 503 aaKnown RBP10.11□□□□□ -0.79
CTNND1-205ENST00000399050 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
CTNND1-205ENST00000399050 PAXBP1Q9Y5B6 917 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 TOP1P11387 765 aaKnown RBP10.11□□□□□ -0.79
CTNND1-205ENST00000399050 JAKMIP3Q5VZ66 844 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 LIMCH1Q9UPQ0 1083 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 NUP133Q8WUM0 1156 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 CTAGE5O15320 804 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 RAB11FIP3O75154 756 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 NOLC1Q14978 699 aaKnown RBP eCLIP10.11□□□□□ -0.79
CTNND1-205ENST00000399050 MAP9Q49MG5 647 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 AFAP1Q8N556 730 aa10.11□□□□□ -0.79
CTNND1-205ENST00000399050 DDX54Q8TDD1 881 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms