RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 FYB1O15117 783 aa15.54■□□□□ 0.08
SRMP1-201ENST00000398959 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
SRMP1-201ENST00000398959 GGNBP2Q9H3C7 697 aa15.54■□□□□ 0.08
SRMP1-201ENST00000398959 COL24A1Q17RW2 1714 aa15.54■□□□□ 0.08
SRMP1-201ENST00000398959 TAF1LQ8IZX4 1826 aa15.53■□□□□ 0.08
SRMP1-201ENST00000398959 ZCRB1Q8TBF4 217 aaKnown RBP15.53■□□□□ 0.08
SRMP1-201ENST00000398959 ANKRD26Q9UPS8 1709 aa15.52■□□□□ 0.08
SRMP1-201ENST00000398959 C5P01031 1676 aa15.52■□□□□ 0.08
SRMP1-201ENST00000398959 ZNF827Q17R98 1081 aa15.52■□□□□ 0.08
SRMP1-201ENST00000398959 LRRC4BQ9NT99 713 aa15.52■□□□□ 0.08
SRMP1-201ENST00000398959 SLC27A3Q5K4L6 730 aa15.51■□□□□ 0.07
SRMP1-201ENST00000398959 FHDC1Q9C0D6 1143 aaPredicted RBP15.51■□□□□ 0.07
SRMP1-201ENST00000398959 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
SRMP1-201ENST00000398959 NBPF6Q5VWK0 638 aa15.5■□□□□ 0.07
SRMP1-201ENST00000398959 USHBP1Q8N6Y0 703 aa15.5■□□□□ 0.07
SRMP1-201ENST00000398959 NBPF4Q96M43 638 aa15.5■□□□□ 0.07
SRMP1-201ENST00000398959 PKD1L3Q7Z443 1732 aa15.5■□□□□ 0.07
SRMP1-201ENST00000398959 CGNL1Q0VF96 1302 aa15.49■□□□□ 0.07
SRMP1-201ENST00000398959 RAPGEF4Q8WZA2 1011 aa15.49■□□□□ 0.07
SRMP1-201ENST00000398959 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
SRMP1-201ENST00000398959 SYT17Q9BSW7 474 aa15.49■□□□□ 0.07
SRMP1-201ENST00000398959 NSD2O96028 1365 aa15.49■□□□□ 0.07
SRMP1-201ENST00000398959 INSRP06213 1382 aa15.49■□□□□ 0.07
SRMP1-201ENST00000398959 FLT4P35916 1363 aa15.49■□□□□ 0.07
SRMP1-201ENST00000398959 TOGARAM1Q9Y4F4 1720 aa15.48■□□□□ 0.07
SRMP1-201ENST00000398959 UTRNP46939 3433 aa15.48■□□□□ 0.07
SRMP1-201ENST00000398959 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
SRMP1-201ENST00000398959 ARXQ96QS3 562 aa15.48■□□□□ 0.07
SRMP1-201ENST00000398959 NSD3Q9BZ95 1437 aa15.48■□□□□ 0.07
SRMP1-201ENST00000398959 TATP17735 454 aaPredicted RBP15.47■□□□□ 0.07
SRMP1-201ENST00000398959 KCNQ4P56696 695 aa15.47■□□□□ 0.07
SRMP1-201ENST00000398959 TFCP2L1Q9NZI6 479 aa15.47■□□□□ 0.07
SRMP1-201ENST00000398959 KIF24Q5T7B8 1368 aa15.47■□□□□ 0.07
SRMP1-201ENST00000398959 HSP90AB2PQ58FF8 381 aa15.46■□□□□ 0.07
SRMP1-201ENST00000398959 PCDH11XQ9BZA7 1347 aa15.45■□□□□ 0.06
SRMP1-201ENST00000398959 PCDH11YQ9BZA8 1340 aa15.45■□□□□ 0.06
SRMP1-201ENST00000398959 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
SRMP1-201ENST00000398959 CCNL1Q9UK58 526 aaPredicted RBP15.45■□□□□ 0.06
SRMP1-201ENST00000398959 PNPLA7Q6ZV29 1317 aa15.44■□□□□ 0.06
SRMP1-201ENST00000398959 POLD1P28340 1107 aa15.44■□□□□ 0.06
SRMP1-201ENST00000398959 CARD14Q9BXL6 1004 aa15.44■□□□□ 0.06
SRMP1-201ENST00000398959 TIMELESSQ9UNS1 1208 aa15.44■□□□□ 0.06
SRMP1-201ENST00000398959 MAP3K5Q99683 1374 aa15.44■□□□□ 0.06
SRMP1-201ENST00000398959 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
SRMP1-201ENST00000398959 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
SRMP1-201ENST00000398959 PPM1GO15355 546 aaPredicted RBP15.42■□□□□ 0.06
SRMP1-201ENST00000398959 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
SRMP1-201ENST00000398959 UBR3Q6ZT12 1888 aa15.42■□□□□ 0.06
SRMP1-201ENST00000398959 C4BP0C0L5 1744 aa15.41■□□□□ 0.06
SRMP1-201ENST00000398959 MSH5O43196 834 aa15.41■□□□□ 0.06
SRMP1-201ENST00000398959 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
SRMP1-201ENST00000398959 CLSPNQ9HAW4 1339 aa15.41■□□□□ 0.06
SRMP1-201ENST00000398959 GPR162Q16538 588 aa15.39■□□□□ 0.05
SRMP1-201ENST00000398959 MPRIPQ6WCQ1 1025 aa15.39■□□□□ 0.05
SRMP1-201ENST00000398959 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
SRMP1-201ENST00000398959 GOLGB1Q14789 3259 aaKnown RBP15.38■□□□□ 0.05
SRMP1-201ENST00000398959 NCAPD2Q15021 1401 aa15.38■□□□□ 0.05
SRMP1-201ENST00000398959 CYP27B1O15528 508 aa15.38■□□□□ 0.05
SRMP1-201ENST00000398959 HMGB2P26583 209 aaKnown RBP15.38■□□□□ 0.05
SRMP1-201ENST00000398959 WASHC2AQ641Q2 1341 aa15.37■□□□□ 0.05
SRMP1-201ENST00000398959 COL23A1Q86Y22 540 aaPredicted RBP15.36■□□□□ 0.05
SRMP1-201ENST00000398959 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
SRMP1-201ENST00000398959 ZNF784Q8NCA9 323 aaPredicted RBP15.36■□□□□ 0.05
SRMP1-201ENST00000398959 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
SRMP1-201ENST00000398959 SMARCC1Q92922 1105 aaPredicted RBP15.35■□□□□ 0.05
SRMP1-201ENST00000398959 VIRMAQ69YN4 1812 aaKnown RBP15.34■□□□□ 0.05
SRMP1-201ENST00000398959 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
SRMP1-201ENST00000398959 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
SRMP1-201ENST00000398959 EYA1Q99502 592 aa15.34■□□□□ 0.05
SRMP1-201ENST00000398959 EIF4G2P78344 907 aaKnown RBP eCLIP15.33■□□□□ 0.04
SRMP1-201ENST00000398959 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.04
SRMP1-201ENST00000398959 NLGN2Q8NFZ4 835 aa15.33■□□□□ 0.04
SRMP1-201ENST00000398959 POLKQ9UBT6 870 aa15.33■□□□□ 0.04
SRMP1-201ENST00000398959 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
SRMP1-201ENST00000398959 PIGBQ92521 554 aa15.32■□□□□ 0.04
SRMP1-201ENST00000398959 AK7Q96M32 723 aa15.32■□□□□ 0.04
SRMP1-201ENST00000398959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
SRMP1-201ENST00000398959 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
SRMP1-201ENST00000398959 HSPA5P11021 654 aaKnown RBP15.3■□□□□ 0.04
SRMP1-201ENST00000398959 COL5A3P25940 1745 aaPredicted RBP15.3■□□□□ 0.04
SRMP1-201ENST00000398959 EIF4A2Q14240 407 aaKnown RBP15.3■□□□□ 0.04
SRMP1-201ENST00000398959 IFNL2Q8IZJ0 200 aa15.3■□□□□ 0.04
SRMP1-201ENST00000398959 ZNF831Q5JPB2 1677 aa15.29■□□□□ 0.04
SRMP1-201ENST00000398959 PHF14O94880 888 aa15.28■□□□□ 0.04
SRMP1-201ENST00000398959 PHKG2P15735 406 aa15.28■□□□□ 0.04
SRMP1-201ENST00000398959 PANK3Q9H999 370 aa15.28■□□□□ 0.04
SRMP1-201ENST00000398959 PLEKHG2Q9H7P9 1386 aa15.27■□□□□ 0.04
SRMP1-201ENST00000398959 SCN11AQ9UI33 1791 aa15.27■□□□□ 0.04
SRMP1-201ENST00000398959 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
SRMP1-201ENST00000398959 SIK1P57059 783 aa15.27■□□□□ 0.04
SRMP1-201ENST00000398959 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.04
SRMP1-201ENST00000398959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
SRMP1-201ENST00000398959 GRIN3BO60391 1043 aa15.26■□□□□ 0.03
SRMP1-201ENST00000398959 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
SRMP1-201ENST00000398959 ASAP1Q9ULH1 1129 aa15.26■□□□□ 0.03
SRMP1-201ENST00000398959 CD2APQ9Y5K6 639 aa15.26■□□□□ 0.03
SRMP1-201ENST00000398959 KIF13BQ9NQT8 1826 aa15.26■□□□□ 0.03
SRMP1-201ENST00000398959 IGSF1Q8N6C5 1336 aa15.25■□□□□ 0.03
SRMP1-201ENST00000398959 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
SRMP1-201ENST00000398959 SSFA2P28290 1259 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms