RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 BTG4Q9NY30 223 aa16.73■□□□□ 0.27
TOP3B-202ENST00000398793 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
TOP3B-202ENST00000398793 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
TOP3B-202ENST00000398793 UTRNP46939 3433 aa16.72■□□□□ 0.27
TOP3B-202ENST00000398793 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
TOP3B-202ENST00000398793 KCNH5Q8NCM2 988 aa16.72■□□□□ 0.27
TOP3B-202ENST00000398793 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
TOP3B-202ENST00000398793 F6X3S4 739 aa16.71■□□□□ 0.27
TOP3B-202ENST00000398793 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
TOP3B-202ENST00000398793 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
TOP3B-202ENST00000398793 NALCNQ8IZF0 1738 aa16.71■□□□□ 0.27
TOP3B-202ENST00000398793 TEFQ10587 303 aa16.7■□□□□ 0.26
TOP3B-202ENST00000398793 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
TOP3B-202ENST00000398793 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
TOP3B-202ENST00000398793 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
TOP3B-202ENST00000398793 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
TOP3B-202ENST00000398793 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
TOP3B-202ENST00000398793 IL17REQ8NFR9 667 aa16.69■□□□□ 0.26
TOP3B-202ENST00000398793 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
TOP3B-202ENST00000398793 AIMP1Q12904 312 aaKnown RBP16.69■□□□□ 0.26
TOP3B-202ENST00000398793 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
TOP3B-202ENST00000398793 MST1RQ04912 1400 aa16.68■□□□□ 0.26
TOP3B-202ENST00000398793 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
TOP3B-202ENST00000398793 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
TOP3B-202ENST00000398793 WDR63Q8IWG1 891 aa16.66■□□□□ 0.26
TOP3B-202ENST00000398793 SPATA31A3Q5VYP0 1347 aa16.66■□□□□ 0.26
TOP3B-202ENST00000398793 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
TOP3B-202ENST00000398793 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
TOP3B-202ENST00000398793 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.65■□□□□ 0.26
TOP3B-202ENST00000398793 PNPLA6Q8IY17 1366 aa16.65■□□□□ 0.26
TOP3B-202ENST00000398793 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
TOP3B-202ENST00000398793 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
TOP3B-202ENST00000398793 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
TOP3B-202ENST00000398793 G2E3Q7L622 706 aa16.65■□□□□ 0.26
TOP3B-202ENST00000398793 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
TOP3B-202ENST00000398793 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
TOP3B-202ENST00000398793 XRN1Q8IZH2 1706 aaKnown RBP16.64■□□□□ 0.25
TOP3B-202ENST00000398793 SSH2Q76I76 1423 aa16.64■□□□□ 0.25
TOP3B-202ENST00000398793 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
TOP3B-202ENST00000398793 MYL6BP14649 208 aa16.63■□□□□ 0.25
TOP3B-202ENST00000398793 GNAI1P63096 354 aa16.63■□□□□ 0.25
TOP3B-202ENST00000398793 ACSBG1Q96GR2 724 aa16.63■□□□□ 0.25
TOP3B-202ENST00000398793 TRIM27P14373 513 aa16.63■□□□□ 0.25
TOP3B-202ENST00000398793 KCNQ4P56696 695 aa16.63■□□□□ 0.25
TOP3B-202ENST00000398793 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
TOP3B-202ENST00000398793 AATKQ6ZMQ8 1374 aa16.62■□□□□ 0.25
TOP3B-202ENST00000398793 ANKARQ7Z5J8 1434 aa16.62■□□□□ 0.25
TOP3B-202ENST00000398793 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
TOP3B-202ENST00000398793 ERBB3P21860 1342 aa16.62■□□□□ 0.25
TOP3B-202ENST00000398793 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
TOP3B-202ENST00000398793 TATP17735 454 aaPredicted RBP16.61■□□□□ 0.25
TOP3B-202ENST00000398793 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
TOP3B-202ENST00000398793 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
TOP3B-202ENST00000398793 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
TOP3B-202ENST00000398793 IGSF1Q8N6C5 1336 aa16.6■□□□□ 0.25
TOP3B-202ENST00000398793 VAMP4O75379 141 aa16.6■□□□□ 0.25
TOP3B-202ENST00000398793 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-202ENST00000398793 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
TOP3B-202ENST00000398793 NAP1L5Q96NT1 182 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-202ENST00000398793 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
TOP3B-202ENST00000398793 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
TOP3B-202ENST00000398793 INSRP06213 1382 aa16.59■□□□□ 0.25
TOP3B-202ENST00000398793 PDE4AP27815 886 aa16.59■□□□□ 0.25
TOP3B-202ENST00000398793 FKBP5Q13451 457 aaPredicted RBP16.59■□□□□ 0.25
TOP3B-202ENST00000398793 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
TOP3B-202ENST00000398793 PHAXQ9H814 394 aaKnown RBP16.59■□□□□ 0.25
TOP3B-202ENST00000398793 TOM1O60784 492 aa16.59■□□□□ 0.25
TOP3B-202ENST00000398793 IGHDP01880 384 aa16.59■□□□□ 0.25
TOP3B-202ENST00000398793 TRMT2AQ8IZ69 625 aaKnown RBP16.58■□□□□ 0.24
TOP3B-202ENST00000398793 LMOD3Q0VAK6 560 aa16.58■□□□□ 0.24
TOP3B-202ENST00000398793 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.24
TOP3B-202ENST00000398793 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
TOP3B-202ENST00000398793 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
TOP3B-202ENST00000398793 SHPRHQ149N8 1683 aa16.57■□□□□ 0.24
TOP3B-202ENST00000398793 ZNF142P52746 1687 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-202ENST00000398793 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
TOP3B-202ENST00000398793 STRCQ7RTU9 1775 aa16.56■□□□□ 0.24
TOP3B-202ENST00000398793 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-202ENST00000398793 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
TOP3B-202ENST00000398793 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
TOP3B-202ENST00000398793 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
TOP3B-202ENST00000398793 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
TOP3B-202ENST00000398793 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
TOP3B-202ENST00000398793 PEAK1Q9H792 1746 aa16.55■□□□□ 0.24
TOP3B-202ENST00000398793 HSP90AA1P07900 732 aaKnown RBP16.55■□□□□ 0.24
TOP3B-202ENST00000398793 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-202ENST00000398793 CYP27B1O15528 508 aa16.55■□□□□ 0.24
TOP3B-202ENST00000398793 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-202ENST00000398793 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-202ENST00000398793 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
TOP3B-202ENST00000398793 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
TOP3B-202ENST00000398793 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
TOP3B-202ENST00000398793 CCDC27Q2M243 656 aa16.53■□□□□ 0.24
TOP3B-202ENST00000398793 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
TOP3B-202ENST00000398793 RRP9O43818 475 aaKnown RBP16.53■□□□□ 0.24
TOP3B-202ENST00000398793 CABP4P57796 275 aa16.53■□□□□ 0.24
TOP3B-202ENST00000398793 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
TOP3B-202ENST00000398793 STK31Q9BXU1 1019 aa16.53■□□□□ 0.24
TOP3B-202ENST00000398793 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
TOP3B-202ENST00000398793 FAM177BA6PVY3 158 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms