RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 XIRP1Q702N8 1843 aaKnown RBP12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 AKAP12Q02952 1782 aa12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 KIF20BQ96Q89 1820 aa12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 ANKARQ7Z5J8 1434 aa12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 CCDC173Q0VFZ6 552 aa12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 ZSCAN30Q86W11 494 aa12.65□□□□□ -0.38
HMGCLL1-205ENST00000398661 OVOS2A0A0J9YW53 1432 aa12.65□□□□□ -0.39
HMGCLL1-205ENST00000398661 OVOS2Q6IE36 1432 aa12.65□□□□□ -0.39
HMGCLL1-205ENST00000398661 GCP02774 474 aa12.64□□□□□ -0.39
HMGCLL1-205ENST00000398661 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
HMGCLL1-205ENST00000398661 IL13P35225 146 aa12.64□□□□□ -0.39
HMGCLL1-205ENST00000398661 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
HMGCLL1-205ENST00000398661 PPP1R9BQ96SB3 815 aa12.64□□□□□ -0.39
HMGCLL1-205ENST00000398661 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
HMGCLL1-205ENST00000398661 FAM83GA6ND36 823 aa12.63□□□□□ -0.39
HMGCLL1-205ENST00000398661 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
HMGCLL1-205ENST00000398661 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
HMGCLL1-205ENST00000398661 C22orf23Q9BZE7 217 aa12.63□□□□□ -0.39
HMGCLL1-205ENST00000398661 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
HMGCLL1-205ENST00000398661 FAM13BQ9NYF5 915 aa12.62□□□□□ -0.39
HMGCLL1-205ENST00000398661 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
HMGCLL1-205ENST00000398661 NRKQ7Z2Y5 1582 aa12.62□□□□□ -0.39
HMGCLL1-205ENST00000398661 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
HMGCLL1-205ENST00000398661 MSNP26038 577 aaKnown RBP12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 FGD1P98174 961 aa12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 E9PSI1 815 aa12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 HOXC9P31274 260 aa12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 SKOR2Q2VWA4 1001 aaPredicted RBP12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
HMGCLL1-205ENST00000398661 DDIT3P35638 169 aa12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 PLEKHF1Q96S99 279 aa12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 NCOA3Q9Y6Q9 1424 aa12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 EYA1Q99502 592 aa12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 R3HCC1Q9Y3T6 440 aaKnown RBP12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
HMGCLL1-205ENST00000398661 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
HMGCLL1-205ENST00000398661 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
HMGCLL1-205ENST00000398661 PEAK1Q9H792 1746 aa12.59□□□□□ -0.39
HMGCLL1-205ENST00000398661 PTMSP20962 102 aa12.59□□□□□ -0.39
HMGCLL1-205ENST00000398661 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
HMGCLL1-205ENST00000398661 MFAP1P55081 439 aaKnown RBP12.59□□□□□ -0.39
HMGCLL1-205ENST00000398661 GBP4Q96PP9 640 aa12.59□□□□□ -0.39
HMGCLL1-205ENST00000398661 NPHP3Q7Z494 1330 aa12.58□□□□□ -0.39
HMGCLL1-205ENST00000398661 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
HMGCLL1-205ENST00000398661 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
HMGCLL1-205ENST00000398661 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
HMGCLL1-205ENST00000398661 NBPF6Q5VWK0 638 aa12.58□□□□□ -0.4
HMGCLL1-205ENST00000398661 MTERF4Q7Z6M4 381 aaKnown RBP12.58□□□□□ -0.4
HMGCLL1-205ENST00000398661 NBPF4Q96M43 638 aa12.58□□□□□ -0.4
HMGCLL1-205ENST00000398661 USP31Q70CQ4 1352 aa12.58□□□□□ -0.4
HMGCLL1-205ENST00000398661 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
HMGCLL1-205ENST00000398661 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
HMGCLL1-205ENST00000398661 UQCRHLA0A096LP55 91 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 UQCRHP07919 91 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 ANKRD26Q9UPS8 1709 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 MCM10Q7L590 875 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 SPATA31A3Q5VYP0 1347 aa12.56□□□□□ -0.4
HMGCLL1-205ENST00000398661 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 RWDD1Q9H446 243 aaPredicted RBP12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 SMC5Q8IY18 1101 aa12.55□□□□□ -0.4
HMGCLL1-205ENST00000398661 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 KIAA0232Q92628 1395 aa12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 HS1BP3Q53T59 392 aa12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 FLT4P35916 1363 aa12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 ZNF500O60304 480 aaPredicted RBP12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 SNX21Q969T3 373 aa12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 ZHX1Q9UKY1 873 aaPredicted RBP12.54□□□□□ -0.4
HMGCLL1-205ENST00000398661 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
HMGCLL1-205ENST00000398661 SBNO1A3KN83 1393 aa12.53□□□□□ -0.4
HMGCLL1-205ENST00000398661 FCHSD2O94868 740 aa12.53□□□□□ -0.4
HMGCLL1-205ENST00000398661 ANKRD24Q8TF21 1146 aa12.53□□□□□ -0.4
HMGCLL1-205ENST00000398661 PRDM10Q9NQV6 1147 aa12.53□□□□□ -0.4
HMGCLL1-205ENST00000398661 IBTKQ9P2D0 1353 aaPredicted RBP12.53□□□□□ -0.4
HMGCLL1-205ENST00000398661 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.4
HMGCLL1-205ENST00000398661 IP6K1Q92551 441 aa12.52□□□□□ -0.4
HMGCLL1-205ENST00000398661 ARID3AQ99856 593 aa12.52□□□□□ -0.4
HMGCLL1-205ENST00000398661 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.4
HMGCLL1-205ENST00000398661 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.4
HMGCLL1-205ENST00000398661 CDK12Q9NYV4 1490 aaPredicted RBP12.52□□□□□ -0.4
HMGCLL1-205ENST00000398661 DCCP43146 1447 aa12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 PXDNQ92626 1479 aa12.52□□□□□ -0.41
HMGCLL1-205ENST00000398661 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms