RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 PRIM1P49642 420 aaKnown RBP20.14■□□□□ 0.81
RAB1A-201ENST00000398529 A0A1W2PP64 1363 aa20.13■□□□□ 0.81
RAB1A-201ENST00000398529 ANKRD36BQ8N2N9 1353 aa20.12■□□□□ 0.81
RAB1A-201ENST00000398529 PNPLA7Q6ZV29 1317 aa20.12■□□□□ 0.81
RAB1A-201ENST00000398529 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
RAB1A-201ENST00000398529 ZCRB1Q8TBF4 217 aaKnown RBP20.12■□□□□ 0.81
RAB1A-201ENST00000398529 GRIN3BO60391 1043 aa20.1■□□□□ 0.81
RAB1A-201ENST00000398529 CCNL1Q9UK58 526 aaPredicted RBP20.1■□□□□ 0.81
RAB1A-201ENST00000398529 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
RAB1A-201ENST00000398529 USP47Q96K76 1375 aa20.08■□□□□ 0.81
RAB1A-201ENST00000398529 DOT1LQ8TEK3 1739 aa20.08■□□□□ 0.81
RAB1A-201ENST00000398529 HOXC9P31274 260 aa20.08■□□□□ 0.81
RAB1A-201ENST00000398529 KCNQ4P56696 695 aa20.08■□□□□ 0.81
RAB1A-201ENST00000398529 MAP3K19Q56UN5 1328 aa20.07■□□□□ 0.8
RAB1A-201ENST00000398529 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
RAB1A-201ENST00000398529 LY75O60449 1722 aa20.07■□□□□ 0.8
RAB1A-201ENST00000398529 CGNL1Q0VF96 1302 aa20.06■□□□□ 0.8
RAB1A-201ENST00000398529 COL24A1Q17RW2 1714 aa20.06■□□□□ 0.8
RAB1A-201ENST00000398529 TUBGCP6Q96RT7 1819 aa20.06■□□□□ 0.8
RAB1A-201ENST00000398529 SMG6Q86US8 1419 aaKnown RBP20.05■□□□□ 0.8
RAB1A-201ENST00000398529 RGPD2P0DJD1 1756 aa20.04■□□□□ 0.8
RAB1A-201ENST00000398529 NLGN2Q8NFZ4 835 aa20.04■□□□□ 0.8
RAB1A-201ENST00000398529 FLAD1Q8NFF5 587 aa20.03■□□□□ 0.8
RAB1A-201ENST00000398529 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.8
RAB1A-201ENST00000398529 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
RAB1A-201ENST00000398529 RTL1A6NKG5 1358 aa20.02■□□□□ 0.8
RAB1A-201ENST00000398529 COL23A1Q86Y22 540 aaPredicted RBP20.01■□□□□ 0.79
RAB1A-201ENST00000398529 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
RAB1A-201ENST00000398529 ST20-MTHFSA0A0A6YYL1 179 aa20■□□□□ 0.79
RAB1A-201ENST00000398529 NSD2O96028 1365 aa19.99■□□□□ 0.79
RAB1A-201ENST00000398529 MEGF6O75095 1541 aa19.99■□□□□ 0.79
RAB1A-201ENST00000398529 FBLN1P23142 703 aa19.99■□□□□ 0.79
RAB1A-201ENST00000398529 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
RAB1A-201ENST00000398529 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
RAB1A-201ENST00000398529 SHANK3Q9BYB0 1731 aa19.99■□□□□ 0.79
RAB1A-201ENST00000398529 RRS1Q15050 365 aaKnown RBP19.98■□□□□ 0.79
RAB1A-201ENST00000398529 MSL1Q68DK7 614 aa19.98■□□□□ 0.79
RAB1A-201ENST00000398529 CD2APQ9Y5K6 639 aa19.98■□□□□ 0.79
RAB1A-201ENST00000398529 PCDH11XQ9BZA7 1347 aa19.98■□□□□ 0.79
RAB1A-201ENST00000398529 PCDH11YQ9BZA8 1340 aa19.98■□□□□ 0.79
RAB1A-201ENST00000398529 YBX3P16989 372 aaKnown RBP eCLIP19.97■□□□□ 0.79
RAB1A-201ENST00000398529 USHBP1Q8N6Y0 703 aa19.97■□□□□ 0.79
RAB1A-201ENST00000398529 GOLGB1Q14789 3259 aaKnown RBP19.96■□□□□ 0.79
RAB1A-201ENST00000398529 TMF1P82094 1093 aa19.96■□□□□ 0.79
RAB1A-201ENST00000398529 MPRIPQ6WCQ1 1025 aa19.96■□□□□ 0.79
RAB1A-201ENST00000398529 TESK2Q96S53 571 aa19.96■□□□□ 0.79
RAB1A-201ENST00000398529 C5P01031 1676 aa19.96■□□□□ 0.79
RAB1A-201ENST00000398529 SMARCC1Q92922 1105 aaPredicted RBP19.95■□□□□ 0.78
RAB1A-201ENST00000398529 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
RAB1A-201ENST00000398529 FYB1O15117 783 aa19.94■□□□□ 0.78
RAB1A-201ENST00000398529 AK7Q96M32 723 aa19.94■□□□□ 0.78
RAB1A-201ENST00000398529 CDCA8Q53HL2 280 aa19.93■□□□□ 0.78
RAB1A-201ENST00000398529 GPBP1L1Q9HC44 474 aaPredicted RBP19.93■□□□□ 0.78
RAB1A-201ENST00000398529 PALLDQ8WX93 1383 aa19.93■□□□□ 0.78
RAB1A-201ENST00000398529 INSRP06213 1382 aa19.92■□□□□ 0.78
RAB1A-201ENST00000398529 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
RAB1A-201ENST00000398529 FLT4P35916 1363 aa19.91■□□□□ 0.78
RAB1A-201ENST00000398529 KIF24Q5T7B8 1368 aa19.91■□□□□ 0.78
RAB1A-201ENST00000398529 NSD3Q9BZ95 1437 aa19.91■□□□□ 0.78
RAB1A-201ENST00000398529 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
RAB1A-201ENST00000398529 ATP10DQ9P241 1426 aa19.9■□□□□ 0.78
RAB1A-201ENST00000398529 SPG7Q9UQ90 795 aa19.89■□□□□ 0.77
RAB1A-201ENST00000398529 KIF20BQ96Q89 1820 aa19.88■□□□□ 0.77
RAB1A-201ENST00000398529 ITGB4P16144 1822 aa19.88■□□□□ 0.77
RAB1A-201ENST00000398529 PHF14O94880 888 aa19.87■□□□□ 0.77
RAB1A-201ENST00000398529 IFFO2Q5TF58 517 aa19.87■□□□□ 0.77
RAB1A-201ENST00000398529 C4BP0C0L5 1744 aa19.86■□□□□ 0.77
RAB1A-201ENST00000398529 PPM1GO15355 546 aaPredicted RBP19.86■□□□□ 0.77
RAB1A-201ENST00000398529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.85■□□□□ 0.77
RAB1A-201ENST00000398529 CYP27B1O15528 508 aa19.85■□□□□ 0.77
RAB1A-201ENST00000398529 ZNF526Q8TF50 670 aaPredicted RBP19.85■□□□□ 0.77
RAB1A-201ENST00000398529 SSFA2P28290 1259 aa19.84■□□□□ 0.77
RAB1A-201ENST00000398529 TMOD3Q9NYL9 352 aa19.84■□□□□ 0.77
RAB1A-201ENST00000398529 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.77
RAB1A-201ENST00000398529 PIGBQ92521 554 aa19.83■□□□□ 0.77
RAB1A-201ENST00000398529 UBR3Q6ZT12 1888 aa19.82■□□□□ 0.76
RAB1A-201ENST00000398529 LOC102724428A0A0B4J2F2 783 aa19.81■□□□□ 0.76
RAB1A-201ENST00000398529 SIK1P57059 783 aa19.81■□□□□ 0.76
RAB1A-201ENST00000398529 CEP350Q5VT06 3117 aa19.8■□□□□ 0.76
RAB1A-201ENST00000398529 PKD1L3Q7Z443 1732 aa19.8■□□□□ 0.76
RAB1A-201ENST00000398529 HSPA6P17066 643 aa19.8■□□□□ 0.76
RAB1A-201ENST00000398529 NKX1-1Q15270 411 aaPredicted RBP19.8■□□□□ 0.76
RAB1A-201ENST00000398529 EMILIN1Q9Y6C2 1016 aa19.8■□□□□ 0.76
RAB1A-201ENST00000398529 GNPATO15228 680 aa19.79■□□□□ 0.76
RAB1A-201ENST00000398529 ATP6V1AP38606 617 aa19.79■□□□□ 0.76
RAB1A-201ENST00000398529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.79■□□□□ 0.76
RAB1A-201ENST00000398529 WWC3Q9ULE0 1092 aa19.79■□□□□ 0.76
RAB1A-201ENST00000398529 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
RAB1A-201ENST00000398529 IFNL2Q8IZJ0 200 aa19.78■□□□□ 0.76
RAB1A-201ENST00000398529 TIMELESSQ9UNS1 1208 aa19.78■□□□□ 0.76
RAB1A-201ENST00000398529 ADCY9O60503 1353 aa19.76■□□□□ 0.75
RAB1A-201ENST00000398529 LINC00116Q8NCU8 138 aa19.76■□□□□ 0.75
RAB1A-201ENST00000398529 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
RAB1A-201ENST00000398529 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
RAB1A-201ENST00000398529 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
RAB1A-201ENST00000398529 SMIM5Q71RC9 77 aa19.74■□□□□ 0.75
RAB1A-201ENST00000398529 AMIGO3Q86WK7 504 aa19.74■□□□□ 0.75
RAB1A-201ENST00000398529 NLGN1Q8N2Q7 840 aa19.74■□□□□ 0.75
RAB1A-201ENST00000398529 CARD14Q9BXL6 1004 aa19.74■□□□□ 0.75
RAB1A-201ENST00000398529 ASAP1Q9ULH1 1129 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms