RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 XRCC6P12956 609 aaKnown RBP eCLIP19.49■□□□□ 0.71
CTDSP2-201ENST00000398073 CCDC70Q6NSX1 233 aa19.49■□□□□ 0.71
CTDSP2-201ENST00000398073 SNX21Q969T3 373 aa19.49■□□□□ 0.71
CTDSP2-201ENST00000398073 AACSQ86V21 672 aa19.48■□□□□ 0.71
CTDSP2-201ENST00000398073 KDM2BQ8NHM5 1336 aa19.48■□□□□ 0.71
CTDSP2-201ENST00000398073 GNAT3A8MTJ3 354 aa19.48■□□□□ 0.71
CTDSP2-201ENST00000398073 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
CTDSP2-201ENST00000398073 SYCP2Q9BX26 1530 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 RLBP1P12271 317 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 SPATA32Q96LK8 384 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 KDM5BQ9UGL1 1544 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 DHX8Q14562 1220 aaKnown RBP19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 STK38Q15208 465 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 TTC22Q5TAA0 569 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 NUTM1Q86Y26 1132 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 STK3Q13188 491 aa19.47■□□□□ 0.71
CTDSP2-201ENST00000398073 ADGRL2O95490 1459 aa19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 CEBPZQ03701 1054 aaKnown RBP19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 MBIPQ9NS73 344 aa19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 SMC2O95347 1197 aa19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 CLCN1P35523 988 aa19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 KRT32Q14532 448 aa19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 NPC1L1Q9UHC9 1359 aa19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 CASTP20810 708 aaKnown RBP19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 PLCH2O75038 1416 aa19.46■□□□□ 0.71
CTDSP2-201ENST00000398073 FANCAO15360 1455 aa19.46■□□□□ 0.7
CTDSP2-201ENST00000398073 EVA1CP58658 441 aa19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 CCDC183Q5T5S1 534 aa19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 CCDC112Q8NEF3 446 aa19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 CD109Q6YHK3 1445 aa19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 CCP110O43303 1012 aa19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 CCDC47Q96A33 483 aaKnown RBP19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 CFAP45Q9UL16 551 aa19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 SIL1Q9H173 461 aa19.45■□□□□ 0.7
CTDSP2-201ENST00000398073 ZMYM4Q5VZL5 1548 aa19.44■□□□□ 0.7
CTDSP2-201ENST00000398073 MARCH6O60337 910 aa19.44■□□□□ 0.7
CTDSP2-201ENST00000398073 FMNL2Q96PY5 1086 aa19.44■□□□□ 0.7
CTDSP2-201ENST00000398073 MAP3K11Q16584 847 aa19.44■□□□□ 0.7
CTDSP2-201ENST00000398073 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
CTDSP2-201ENST00000398073 SMC5Q8IY18 1101 aa19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 F6X3S4 739 aa19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 WASLO00401 505 aaPredicted RBP19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 MCM5P33992 734 aa19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 ME1P48163 572 aa19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 TNNQ9UQP3 1299 aa19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 SEC24BO95487 1268 aa19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 CARD14Q9BXL6 1004 aa19.43■□□□□ 0.7
CTDSP2-201ENST00000398073 JMYQ8N9B5 988 aa19.42■□□□□ 0.7
CTDSP2-201ENST00000398073 SH2B1Q9NRF2 756 aaPredicted RBP19.42■□□□□ 0.7
CTDSP2-201ENST00000398073 FYB1O15117 783 aa19.42■□□□□ 0.7
CTDSP2-201ENST00000398073 PKNOX2Q96KN3 472 aa19.42■□□□□ 0.7
CTDSP2-201ENST00000398073 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
CTDSP2-201ENST00000398073 ESCO1Q5FWF5 840 aa19.41■□□□□ 0.7
CTDSP2-201ENST00000398073 CCDC83Q8IWF9 413 aa19.41■□□□□ 0.7
CTDSP2-201ENST00000398073 BCL11BQ9C0K0 894 aaPredicted RBP19.41■□□□□ 0.7
CTDSP2-201ENST00000398073 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
CTDSP2-201ENST00000398073 BLMP54132 1417 aaPredicted RBP19.41■□□□□ 0.7
CTDSP2-201ENST00000398073 PDILTQ8N807 584 aa19.41■□□□□ 0.7
CTDSP2-201ENST00000398073 CLSTN1O94985 981 aa19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 LIMCH1Q9UPQ0 1083 aa19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 PANK2Q9BZ23 570 aa19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 PCMTD1Q96MG8 357 aaPredicted RBP19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 GCC2Q8IWJ2 1684 aa19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 BTBD11A6QL63 1104 aa19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 XBP1P17861 261 aa19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 CEP57L1Q8IYX8 460 aa19.4■□□□□ 0.7
CTDSP2-201ENST00000398073 SAMD9Q5K651 1589 aa19.39■□□□□ 0.7
CTDSP2-201ENST00000398073 SCAND2PQ9GZW5 306 aaPredicted RBP19.39■□□□□ 0.7
CTDSP2-201ENST00000398073 ACBD3Q9H3P7 528 aa19.39■□□□□ 0.7
CTDSP2-201ENST00000398073 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.7
CTDSP2-201ENST00000398073 A2MP01023 1474 aa19.39■□□□□ 0.7
CTDSP2-201ENST00000398073 LRRFIP2Q9Y608 721 aaKnown RBP19.39■□□□□ 0.69
CTDSP2-201ENST00000398073 FLIIQ13045 1269 aa19.39■□□□□ 0.69
CTDSP2-201ENST00000398073 SART3Q15020 963 aaKnown RBP19.39■□□□□ 0.69
CTDSP2-201ENST00000398073 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
CTDSP2-201ENST00000398073 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
CTDSP2-201ENST00000398073 FERMT3Q86UX7 667 aa19.38■□□□□ 0.69
CTDSP2-201ENST00000398073 CCDC66A2RUB6 948 aa19.38■□□□□ 0.69
CTDSP2-201ENST00000398073 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
CTDSP2-201ENST00000398073 SDSP20132 328 aa19.38■□□□□ 0.69
CTDSP2-201ENST00000398073 CCDC158Q5M9N0 1113 aa19.38■□□□□ 0.69
CTDSP2-201ENST00000398073 AMOTL1Q8IY63 956 aa19.38■□□□□ 0.69
CTDSP2-201ENST00000398073 PDCL3Q9H2J4 239 aa19.38■□□□□ 0.69
CTDSP2-201ENST00000398073 ZSCAN23Q3MJ62 389 aa19.37■□□□□ 0.69
CTDSP2-201ENST00000398073 HSP90B2PQ58FF3 399 aa19.37■□□□□ 0.69
CTDSP2-201ENST00000398073 ANKRD44Q8N8A2 993 aa19.37■□□□□ 0.69
CTDSP2-201ENST00000398073 PRKCSHP14314 528 aaPredicted RBP19.37■□□□□ 0.69
CTDSP2-201ENST00000398073 MRPL50Q8N5N7 158 aaKnown RBP19.37■□□□□ 0.69
CTDSP2-201ENST00000398073 VPS37DQ86XT2 251 aa19.37■□□□□ 0.69
CTDSP2-201ENST00000398073 BRMS1Q9HCU9 246 aa19.37■□□□□ 0.69
CTDSP2-201ENST00000398073 FAM83GA6ND36 823 aa19.36■□□□□ 0.69
CTDSP2-201ENST00000398073 RAB3GAP1Q15042 981 aa19.36■□□□□ 0.69
CTDSP2-201ENST00000398073 USP25Q9UHP3 1055 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms