RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 NPC1L1Q9UHC9 1359 aa22.87■■□□□ 1.25
APTR-201ENST00000398043 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
APTR-201ENST00000398043 BCL11BQ9C0K0 894 aaPredicted RBP22.86■■□□□ 1.25
APTR-201ENST00000398043 PARD3Q8TEW0 1356 aa22.86■■□□□ 1.25
APTR-201ENST00000398043 DOT1LQ8TEK3 1739 aa22.85■■□□□ 1.25
APTR-201ENST00000398043 EYA1Q99502 592 aa22.84■■□□□ 1.25
APTR-201ENST00000398043 EIF4A2Q14240 407 aaKnown RBP22.83■■□□□ 1.25
APTR-201ENST00000398043 ZCRB1Q8TBF4 217 aaKnown RBP22.82■■□□□ 1.24
APTR-201ENST00000398043 PLSCR1O15162 318 aa22.81■■□□□ 1.24
APTR-201ENST00000398043 KCNQ2O43526 872 aa22.81■■□□□ 1.24
APTR-201ENST00000398043 RAPGEF4Q8WZA2 1011 aa22.8■■□□□ 1.24
APTR-201ENST00000398043 DDX54Q8TDD1 881 aaKnown RBP22.79■■□□□ 1.24
APTR-201ENST00000398043 ITGB4P16144 1822 aa22.79■■□□□ 1.24
APTR-201ENST00000398043 IGSF1Q8N6C5 1336 aa22.79■■□□□ 1.24
APTR-201ENST00000398043 TATP17735 454 aaPredicted RBP22.78■■□□□ 1.24
APTR-201ENST00000398043 CC2D1BQ5T0F9 858 aaKnown RBP22.78■■□□□ 1.24
APTR-201ENST00000398043 TOGARAM1Q9Y4F4 1720 aa22.77■■□□□ 1.24
APTR-201ENST00000398043 ACSBG1Q96GR2 724 aa22.77■■□□□ 1.24
APTR-201ENST00000398043 PROM2Q8N271 834 aa22.76■■□□□ 1.23
APTR-201ENST00000398043 PLEKHG2Q9H7P9 1386 aa22.75■■□□□ 1.23
APTR-201ENST00000398043 LY75O60449 1722 aa22.74■■□□□ 1.23
APTR-201ENST00000398043 CYP27B1O15528 508 aa22.73■■□□□ 1.23
APTR-201ENST00000398043 MTHFSP49914 203 aa22.73■■□□□ 1.23
APTR-201ENST00000398043 PCDH11XQ9BZA7 1347 aa22.73■■□□□ 1.23
APTR-201ENST00000398043 PCDH11YQ9BZA8 1340 aa22.73■■□□□ 1.23
APTR-201ENST00000398043 IL13P35225 146 aa22.72■■□□□ 1.23
APTR-201ENST00000398043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.72■■□□□ 1.236e-6■□□□□ 8.9
APTR-201ENST00000398043 COL3A1P02461 1466 aaPredicted RBP22.71■■□□□ 1.23
APTR-201ENST00000398043 PAPPAQ13219 1627 aa22.7■■□□□ 1.22
APTR-201ENST00000398043 KDRP35968 1356 aa22.69■■□□□ 1.22
APTR-201ENST00000398043 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
APTR-201ENST00000398043 PSDA5PKW4 1024 aaPredicted RBP22.68■■□□□ 1.22
APTR-201ENST00000398043 PRIM1P49642 420 aaKnown RBP22.68■■□□□ 1.22
APTR-201ENST00000398043 NKX1-1Q15270 411 aaPredicted RBP22.68■■□□□ 1.22
APTR-201ENST00000398043 TXNRD1Q16881 649 aa22.68■■□□□ 1.22
APTR-201ENST00000398043 R3HDM1Q15032 1099 aaKnown RBP22.67■■□□□ 1.22
APTR-201ENST00000398043 LRP5O75197 1615 aa22.67■■□□□ 1.22
APTR-201ENST00000398043 SRCAPQ6ZRS2 3230 aa22.66■■□□□ 1.22
APTR-201ENST00000398043 AEBP1Q8IUX7 1158 aa22.66■■□□□ 1.22
APTR-201ENST00000398043 SPG7Q9UQ90 795 aa22.66■■□□□ 1.22
APTR-201ENST00000398043 CASZ1Q86V15 1759 aa22.64■■□□□ 1.22
APTR-201ENST00000398043 ANO8Q9HCE9 1232 aaPredicted RBP22.64■■□□□ 1.21
APTR-201ENST00000398043 TAF1LQ8IZX4 1826 aa22.64■■□□□ 1.21
APTR-201ENST00000398043 PHKG2P15735 406 aa22.62■■□□□ 1.21
APTR-201ENST00000398043 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
APTR-201ENST00000398043 NBPF14Q5TI25 921 aa22.62■■□□□ 1.21
APTR-201ENST00000398043 TUBGCP6Q96RT7 1819 aa22.61■■□□□ 1.21
APTR-201ENST00000398043 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
APTR-201ENST00000398043 QSER1Q2KHR3 1735 aa22.61■■□□□ 1.21
APTR-201ENST00000398043 SULT6B1Q6IMI4 303 aa22.61■■□□□ 1.21
APTR-201ENST00000398043 SYTL4Q96C24 671 aaPredicted RBP22.61■■□□□ 1.21
APTR-201ENST00000398043 LRRC4BQ9NT99 713 aa22.61■■□□□ 1.21
APTR-201ENST00000398043 IFNL2Q8IZJ0 200 aa22.6■■□□□ 1.21
APTR-201ENST00000398043 DIAPH1O60610 1272 aaKnown RBP22.59■■□□□ 1.21
APTR-201ENST00000398043 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
APTR-201ENST00000398043 ZEB1P37275 1124 aaPredicted RBP22.57■■□□□ 1.2
APTR-201ENST00000398043 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
APTR-201ENST00000398043 PLEKHO1Q53GL0 409 aaPredicted RBP22.57■■□□□ 1.2
APTR-201ENST00000398043 C5P01031 1676 aa22.56■■□□□ 1.2
APTR-201ENST00000398043 SLC27A3Q5K4L6 730 aa22.56■■□□□ 1.2
APTR-201ENST00000398043 KDM6AO15550 1401 aaPredicted RBP22.56■■□□□ 1.2
APTR-201ENST00000398043 ADAMTS7Q9UKP4 1686 aa22.55■■□□□ 1.2
APTR-201ENST00000398043 PIGBQ92521 554 aa22.55■■□□□ 1.2
APTR-201ENST00000398043 HMOX1P09601 288 aa22.54■■□□□ 1.2
APTR-201ENST00000398043 MPRIPQ6WCQ1 1025 aa22.54■■□□□ 1.2
APTR-201ENST00000398043 SLC15A2Q16348 729 aa22.53■■□□□ 1.2
APTR-201ENST00000398043 ZNF530Q6P9A1 599 aaPredicted RBP22.53■■□□□ 1.2
APTR-201ENST00000398043 KCNQ4P56696 695 aa22.51■■□□□ 1.19
APTR-201ENST00000398043 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
APTR-201ENST00000398043 ZNF827Q17R98 1081 aa22.51■■□□□ 1.19
APTR-201ENST00000398043 AKT1S1Q96B36 256 aa22.51■■□□□ 1.19
APTR-201ENST00000398043 DCAF5Q96JK2 942 aa22.51■■□□□ 1.19
APTR-201ENST00000398043 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
APTR-201ENST00000398043 STK32BQ9NY57 414 aa22.51■■□□□ 1.19
APTR-201ENST00000398043 ZNF831Q5JPB2 1677 aa22.51■■□□□ 1.19
APTR-201ENST00000398043 PALLDQ8WX93 1383 aa22.5■■□□□ 1.19
APTR-201ENST00000398043 HSP90AB1P08238 724 aaKnown RBP22.5■■□□□ 1.19
APTR-201ENST00000398043 COL24A1Q17RW2 1714 aa22.49■■□□□ 1.19
APTR-201ENST00000398043 ERVV-2B6SEH9 535 aa22.49■■□□□ 1.19
APTR-201ENST00000398043 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
APTR-201ENST00000398043 TMOD3Q9NYL9 352 aa22.48■■□□□ 1.19
APTR-201ENST00000398043 CCNL1Q9UK58 526 aaPredicted RBP22.48■■□□□ 1.19
APTR-201ENST00000398043 UBR3Q6ZT12 1888 aa22.47■■□□□ 1.19
APTR-201ENST00000398043 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
APTR-201ENST00000398043 C4BP0C0L5 1744 aa22.46■■□□□ 1.19
APTR-201ENST00000398043 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
APTR-201ENST00000398043 MTHFSDQ2M296 383 aaKnown RBP22.46■■□□□ 1.19
APTR-201ENST00000398043 AKAP4Q5JQC9 854 aa22.46■■□□□ 1.19
APTR-201ENST00000398043 C1orf141Q5JVX7 400 aa22.46■■□□□ 1.19
APTR-201ENST00000398043 ASAP1Q9ULH1 1129 aa22.46■■□□□ 1.19
APTR-201ENST00000398043 MRC1P22897 1456 aa22.46■■□□□ 1.19
APTR-201ENST00000398043 ATG3Q9NT62 314 aa22.45■■□□□ 1.18
APTR-201ENST00000398043 COL5A3P25940 1745 aaPredicted RBP22.45■■□□□ 1.18
APTR-201ENST00000398043 SIPA1L3O60292 1781 aaPredicted RBP22.45■■□□□ 1.18
APTR-201ENST00000398043 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
APTR-201ENST00000398043 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
APTR-201ENST00000398043 MYH14Q7Z406 1995 aaKnown RBP22.42■■□□□ 1.18
APTR-201ENST00000398043 DLG5Q8TDM6 1919 aa22.42■■□□□ 1.18
APTR-201ENST00000398043 PNPLA7Q6ZV29 1317 aa22.41■■□□□ 1.18
APTR-201ENST00000398043 RALBP1Q15311 655 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms