RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 MARCH6O60337 910 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZPR1O75312 459 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 GTF2F1P35269 517 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 SLC4A3P48751 1232 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 ATP1A2P50993 1020 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 XPCQ01831 940 aaPredicted RBP3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 KCNH2Q12809 1159 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 NOP9Q86U38 636 aaKnown RBP3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 FAM9AQ8IZU1 332 aaPredicted RBP3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 TMEM87AQ8NBN3 555 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 PLPP7Q8NBV4 271 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 LNPKQ9C0E8 428 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 CCSER2Q9H7U1 834 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 MRS2Q9HD23 443 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 DNAAF2Q9NVR5 837 aaKnown RBP3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 CXXC1Q9P0U4 656 aaPredicted RBP3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 FKBPLQ9UIM3 349 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 BRPF3Q9ULD4 1205 aa3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 IQSEC3Q9UPP2 1182 aaPredicted RBP3.02□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZC3H4Q9UPT8 1303 aaKnown RBP3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 RNF223E7ERA6 249 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 ATP2B1P20020 1258 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 HDGFP51858 240 aaKnown RBP3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 FUT2Q10981 343 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 COL19A1Q14993 1142 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZNF662Q6ZS27 426 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 NT5DC4Q86YG4 428 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 RGL4Q8IZJ4 473 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 TMC1Q8TDI8 760 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 GTF3C2Q8WUA4 911 aaPredicted RBP3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZNF592Q92610 1267 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 DHX38Q92620 1227 aaKnown RBP3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 MKNK1Q9BUB5 465 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 CAPN10Q9HC96 672 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 CUEDC1Q9NWM3 386 aaPredicted RBP3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 CEP126Q9P2H0 1117 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 PRKAG2Q9UGJ0 569 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 NOD1Q9Y239 953 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 PCDHB9Q9Y5E1 797 aa3.01□□□□□ -1.93
HMGN2P39-201ENST00000398005 PPEF1O14829 653 aaPredicted RBP3□□□□□ -1.93
HMGN2P39-201ENST00000398005 TLL1O43897 1013 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 LGR5O75473 907 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 FMNL1O95466 1100 aaPredicted RBP3□□□□□ -1.93
HMGN2P39-201ENST00000398005 P4HBP07237 508 aaKnown RBP3□□□□□ -1.93
HMGN2P39-201ENST00000398005 SLC10A3P09131 477 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 GGCXP38435 758 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 ITGAEP38570 1179 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 SEC13P55735 322 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 CLDN10P78369 228 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 FKBP4Q02790 459 aaKnown RBP eCLIP3□□□□□ -1.93
HMGN2P39-201ENST00000398005 PSME1Q06323 249 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 SF3B2Q13435 895 aaKnown RBP3□□□□□ -1.93
HMGN2P39-201ENST00000398005 MTMR3Q13615 1198 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 GNL2Q13823 731 aaKnown RBP3□□□□□ -1.93
HMGN2P39-201ENST00000398005 MRPL58Q14197 206 aaKnown RBP3□□□□□ -1.93
HMGN2P39-201ENST00000398005 MAP7D1Q3KQU3 841 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 CCDC144BQ3MJ40 725 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 SPRYD7Q5W111 196 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 BLOC1S3Q6QNY0 202 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 TAS1R3Q7RTX0 852 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 RETREG3Q86VR2 466 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 CERS3Q8IU89 383 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 LARGE2Q8N3Y3 721 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 PMFBP1Q8TBY8 1022 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 RNF34Q969K3 372 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 HINFPQ9BQA5 517 aa3□□□□□ -1.93
HMGN2P39-201ENST00000398005 TLDC2A0PJX2 215 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 SFI1A8K8P3 1242 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 GDF9O60383 454 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 CFHP08603 1231 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 DNAJA1P31689 397 aaKnown RBP2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 ATP6V1AP38606 617 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 SLC19A1P41440 591 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 MAPK8P45983 427 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 MCCD1P59942 119 aaPredicted RBP2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 PRR20EP86478 221 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 PRR20CP86479 221 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 PRR20DP86480 221 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 PRR20BP86481 221 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 PRR20AP86496 221 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 ARHGAP4P98171 946 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 PTK2Q05397 1052 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 RAD51AP2Q09MP3 1159 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 OCLNQ16625 522 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 LCE2AQ5TA79 106 aaPredicted RBP2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 LYPD8Q6UX82 237 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 LIAT1Q6ZQX7 453 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZNF598Q86UK7 904 aaKnown RBP2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 MICAL1Q8TDZ2 1067 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 FAM161BQ96MY7 647 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 TINF2Q9BSI4 451 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 TGIF2Q9GZN2 237 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 VTI1BQ9UEU0 232 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 SEPT3Q9UH03 358 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 PCDHB3Q9Y5E6 796 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 DNMT3AQ9Y6K1 912 aaPredicted RBP2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 SBNO2Q9Y2G9 1366 aa2.99□□□□□ -1.93
HMGN2P39-201ENST00000398005 hCG_2014768A0A024R1R8 64 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 NDUFB5O43674 189 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms