RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 CASZ1Q86V15 1759 aa13.58□□□□□ -0.24
RFPL3-202ENST00000397468 TMF1P82094 1093 aa13.57□□□□□ -0.24
RFPL3-202ENST00000397468 TRIM26Q12899 539 aaPredicted RBP13.57□□□□□ -0.24
RFPL3-202ENST00000397468 KIF20BQ96Q89 1820 aa13.56□□□□□ -0.24
RFPL3-202ENST00000397468 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
RFPL3-202ENST00000397468 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
RFPL3-202ENST00000397468 DDX54Q8TDD1 881 aaKnown RBP13.55□□□□□ -0.24
RFPL3-202ENST00000397468 IP6K1Q92551 441 aa13.55□□□□□ -0.24
RFPL3-202ENST00000397468 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
RFPL3-202ENST00000397468 USP47Q96K76 1375 aa13.55□□□□□ -0.24
RFPL3-202ENST00000397468 SMG6Q86US8 1419 aaKnown RBP13.55□□□□□ -0.24
RFPL3-202ENST00000397468 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
RFPL3-202ENST00000397468 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
RFPL3-202ENST00000397468 TESK2Q96S53 571 aa13.54□□□□□ -0.24
RFPL3-202ENST00000397468 ANKRD36BQ8N2N9 1353 aa13.54□□□□□ -0.24
RFPL3-202ENST00000397468 MYOM1P52179 1685 aa13.53□□□□□ -0.24
RFPL3-202ENST00000397468 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
RFPL3-202ENST00000397468 YY1P25490 414 aa13.53□□□□□ -0.24
RFPL3-202ENST00000397468 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
RFPL3-202ENST00000397468 HOXC9P31274 260 aa13.52□□□□□ -0.25
RFPL3-202ENST00000397468 PROM2Q8N271 834 aa13.52□□□□□ -0.25
RFPL3-202ENST00000397468 MAP3K19Q56UN5 1328 aa13.52□□□□□ -0.25
RFPL3-202ENST00000397468 RTL1A6NKG5 1358 aa13.51□□□□□ -0.25
RFPL3-202ENST00000397468 GGNBP2Q9H3C7 697 aa13.51□□□□□ -0.25
RFPL3-202ENST00000397468 RRS1Q15050 365 aaKnown RBP13.5□□□□□ -0.25
RFPL3-202ENST00000397468 PDGFDQ9GZP0 370 aaPredicted RBP13.5□□□□□ -0.25
RFPL3-202ENST00000397468 FBLN1P23142 703 aa13.49□□□□□ -0.25
RFPL3-202ENST00000397468 MTFR1LQ9H019 292 aa13.49□□□□□ -0.25
RFPL3-202ENST00000397468 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
RFPL3-202ENST00000397468 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
RFPL3-202ENST00000397468 RAPGEF4Q8WZA2 1011 aa13.48□□□□□ -0.25
RFPL3-202ENST00000397468 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
RFPL3-202ENST00000397468 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
RFPL3-202ENST00000397468 SHANK3Q9BYB0 1731 aa13.47□□□□□ -0.25
RFPL3-202ENST00000397468 USHBP1Q8N6Y0 703 aa13.47□□□□□ -0.25
RFPL3-202ENST00000397468 MEGF6O75095 1541 aa13.46□□□□□ -0.25
RFPL3-202ENST00000397468 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.25
RFPL3-202ENST00000397468 PCGF6Q9BYE7 350 aa13.46□□□□□ -0.25
RFPL3-202ENST00000397468 FHDC1Q9C0D6 1143 aaPredicted RBP13.46□□□□□ -0.25
RFPL3-202ENST00000397468 QSER1Q2KHR3 1735 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 FYB1O15117 783 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
RFPL3-202ENST00000397468 POLD1P28340 1107 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
RFPL3-202ENST00000397468 ZNF827Q17R98 1081 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 NSD3Q9BZ95 1437 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 FLT4P35916 1363 aa13.45□□□□□ -0.26
RFPL3-202ENST00000397468 TUBGCP6Q96RT7 1819 aa13.44□□□□□ -0.26
RFPL3-202ENST00000397468 PTGER2P43116 358 aa13.44□□□□□ -0.26
RFPL3-202ENST00000397468 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
RFPL3-202ENST00000397468 ARXQ96QS3 562 aa13.44□□□□□ -0.26
RFPL3-202ENST00000397468 LY75O60449 1722 aa13.44□□□□□ -0.26
RFPL3-202ENST00000397468 CGNL1Q0VF96 1302 aa13.43□□□□□ -0.26
RFPL3-202ENST00000397468 CHD4Q14839 1912 aa13.43□□□□□ -0.26
RFPL3-202ENST00000397468 HAX1O00165 279 aa13.43□□□□□ -0.26
RFPL3-202ENST00000397468 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
RFPL3-202ENST00000397468 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
RFPL3-202ENST00000397468 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
RFPL3-202ENST00000397468 LRRC4BQ9NT99 713 aa13.43□□□□□ -0.26
RFPL3-202ENST00000397468 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
RFPL3-202ENST00000397468 PCDH11XQ9BZA7 1347 aa13.42□□□□□ -0.26
RFPL3-202ENST00000397468 PCDH11YQ9BZA8 1340 aa13.42□□□□□ -0.26
RFPL3-202ENST00000397468 MAP2P11137 1827 aaKnown RBP13.42□□□□□ -0.26
RFPL3-202ENST00000397468 KCNQ4P56696 695 aa13.42□□□□□ -0.26
RFPL3-202ENST00000397468 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
RFPL3-202ENST00000397468 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
RFPL3-202ENST00000397468 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
RFPL3-202ENST00000397468 INSRP06213 1382 aa13.41□□□□□ -0.26
RFPL3-202ENST00000397468 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
RFPL3-202ENST00000397468 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
RFPL3-202ENST00000397468 KIF24Q5T7B8 1368 aa13.4□□□□□ -0.26
RFPL3-202ENST00000397468 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 EMILIN1Q9Y6C2 1016 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 C5P01031 1676 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 ITGB4P16144 1822 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
RFPL3-202ENST00000397468 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
RFPL3-202ENST00000397468 GPR162Q16538 588 aa13.38□□□□□ -0.27
RFPL3-202ENST00000397468 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
RFPL3-202ENST00000397468 ANKRD26Q9UPS8 1709 aa13.38□□□□□ -0.27
RFPL3-202ENST00000397468 NSD2O96028 1365 aa13.37□□□□□ -0.27
RFPL3-202ENST00000397468 PKD1L3Q7Z443 1732 aa13.37□□□□□ -0.27
RFPL3-202ENST00000397468 SGIP1Q9BQI5 828 aa13.37□□□□□ -0.27
RFPL3-202ENST00000397468 CLSPNQ9HAW4 1339 aa13.37□□□□□ -0.27
RFPL3-202ENST00000397468 TAF1LQ8IZX4 1826 aa13.36□□□□□ -0.27
RFPL3-202ENST00000397468 TNNT2P45379 298 aaPredicted RBP13.36□□□□□ -0.27
RFPL3-202ENST00000397468 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
RFPL3-202ENST00000397468 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
RFPL3-202ENST00000397468 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
RFPL3-202ENST00000397468 TOGARAM1Q9Y4F4 1720 aa13.35□□□□□ -0.27
RFPL3-202ENST00000397468 MAP3K5Q99683 1374 aa13.34□□□□□ -0.27
RFPL3-202ENST00000397468 AK7Q96M32 723 aa13.34□□□□□ -0.27
RFPL3-202ENST00000397468 UTRNP46939 3433 aa13.33□□□□□ -0.27
RFPL3-202ENST00000397468 EIF4G2P78344 907 aaKnown RBP eCLIP13.33□□□□□ -0.28
RFPL3-202ENST00000397468 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms