RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
IFT140-202ENST00000397417 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
IFT140-202ENST00000397417 COL17A1Q9UMD9 1497 aaPredicted RBP13.57□□□□□ -0.24
IFT140-202ENST00000397417 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
IFT140-202ENST00000397417 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
IFT140-202ENST00000397417 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
IFT140-202ENST00000397417 NKTRP30414 1462 aaKnown RBP13.56□□□□□ -0.24
IFT140-202ENST00000397417 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
IFT140-202ENST00000397417 GCP02774 474 aa13.56□□□□□ -0.24
IFT140-202ENST00000397417 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
IFT140-202ENST00000397417 ABCA8O94911 1581 aa13.56□□□□□ -0.24
IFT140-202ENST00000397417 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
IFT140-202ENST00000397417 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
IFT140-202ENST00000397417 SF3A1Q15459 793 aaKnown RBP13.55□□□□□ -0.24
IFT140-202ENST00000397417 NFATC2IPQ8NCF5 419 aa13.55□□□□□ -0.24
IFT140-202ENST00000397417 CHPF2Q9P2E5 772 aa13.55□□□□□ -0.24
IFT140-202ENST00000397417 GOLGA6L3A6NEY3 463 aa13.55□□□□□ -0.24
IFT140-202ENST00000397417 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
IFT140-202ENST00000397417 GSE1Q14687 1217 aa13.55□□□□□ -0.24
IFT140-202ENST00000397417 BCL11BQ9C0K0 894 aaPredicted RBP13.55□□□□□ -0.24
IFT140-202ENST00000397417 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
IFT140-202ENST00000397417 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
IFT140-202ENST00000397417 G2E3Q7L622 706 aa13.54□□□□□ -0.24
IFT140-202ENST00000397417 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
IFT140-202ENST00000397417 KIF6Q6ZMV9 814 aa13.54□□□□□ -0.24
IFT140-202ENST00000397417 UBE3BQ7Z3V4 1068 aa13.54□□□□□ -0.24
IFT140-202ENST00000397417 RUFY2Q8WXA3 655 aa13.54□□□□□ -0.24
IFT140-202ENST00000397417 SNRKQ9NRH2 765 aa13.54□□□□□ -0.24
IFT140-202ENST00000397417 TSPOAP1O95153 1857 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 ERC2O15083 957 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 CLSTN1O94985 981 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 RASSF8Q8NHQ8 419 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 PHAXQ9H814 394 aaKnown RBP13.53□□□□□ -0.24
IFT140-202ENST00000397417 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 MAP3K2Q9Y2U5 619 aa13.53□□□□□ -0.24
IFT140-202ENST00000397417 TTC37Q6PGP7 1564 aa13.52□□□□□ -0.24
IFT140-202ENST00000397417 LGR6Q9HBX8 967 aa13.52□□□□□ -0.24
IFT140-202ENST00000397417 A0A087WZG4 1122 aa13.52□□□□□ -0.25
IFT140-202ENST00000397417 IL27Q8NEV9 243 aa13.52□□□□□ -0.25
IFT140-202ENST00000397417 ADCY10Q96PN6 1610 aa13.52□□□□□ -0.25
IFT140-202ENST00000397417 ASXL1Q8IXJ9 1541 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 CPLX1O14810 134 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 CWF19L2Q2TBE0 894 aaKnown RBP13.51□□□□□ -0.25
IFT140-202ENST00000397417 VPS53Q5VIR6 699 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
IFT140-202ENST00000397417 CROCC2H7BZ55 1655 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 DHX16O60231 1041 aaKnown RBP13.51□□□□□ -0.25
IFT140-202ENST00000397417 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 NFXL1Q6ZNB6 911 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 CNTROBQ8N137 903 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 DNAAF4Q8WXU2 420 aa13.51□□□□□ -0.25
IFT140-202ENST00000397417 PA2G4Q9UQ80 394 aaKnown RBP13.51□□□□□ -0.25
IFT140-202ENST00000397417 CHMP5Q9NZZ3 219 aa13.5□□□□□ -0.25
IFT140-202ENST00000397417 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
IFT140-202ENST00000397417 METP08581 1390 aa13.5□□□□□ -0.25
IFT140-202ENST00000397417 ABCF2Q9UG63 623 aa13.5□□□□□ -0.25
IFT140-202ENST00000397417 KDM5DQ9BY66 1539 aa13.5□□□□□ -0.25
IFT140-202ENST00000397417 UBAP1LF5GYI3 381 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 VAMP4O75379 141 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 BLMP54132 1417 aaPredicted RBP13.49□□□□□ -0.25
IFT140-202ENST00000397417 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 MPHOSPH8Q99549 860 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 IQSEC3Q9UPP2 1182 aaPredicted RBP13.49□□□□□ -0.25
IFT140-202ENST00000397417 PLA2R1Q13018 1463 aa13.49□□□□□ -0.25
IFT140-202ENST00000397417 IDH1O75874 414 aaKnown RBP13.48□□□□□ -0.25
IFT140-202ENST00000397417 PHF14O94880 888 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 SEC24BO95487 1268 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 TCEANC2Q96MN5 208 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 FIBPO43427 364 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 C19orf44Q9H6X5 657 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
IFT140-202ENST00000397417 MSNP26038 577 aaKnown RBP13.48□□□□□ -0.25
IFT140-202ENST00000397417 TRDNQ13061 729 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
IFT140-202ENST00000397417 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
IFT140-202ENST00000397417 HOXC9P31274 260 aa13.47□□□□□ -0.25
IFT140-202ENST00000397417 RALYLQ86SE5 291 aaKnown RBP13.47□□□□□ -0.25
IFT140-202ENST00000397417 FERMT3Q86UX7 667 aa13.47□□□□□ -0.25
IFT140-202ENST00000397417 EXOC5O00471 708 aa13.47□□□□□ -0.25
IFT140-202ENST00000397417 NBPF6Q5VWK0 638 aa13.47□□□□□ -0.25
IFT140-202ENST00000397417 RPAP2Q8IXW5 612 aaPredicted RBP13.47□□□□□ -0.25
IFT140-202ENST00000397417 NBPF4Q96M43 638 aa13.47□□□□□ -0.25
IFT140-202ENST00000397417 CEP126Q9P2H0 1117 aa13.47□□□□□ -0.25
IFT140-202ENST00000397417 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
IFT140-202ENST00000397417 KCNQ3O43525 872 aa13.46□□□□□ -0.25
IFT140-202ENST00000397417 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
IFT140-202ENST00000397417 KLHDC4Q8TBB5 520 aa13.46□□□□□ -0.25
IFT140-202ENST00000397417 TBC1D2BQ9UPU7 963 aa13.46□□□□□ -0.25
IFT140-202ENST00000397417 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms