RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 MFAP1P55081 439 aaKnown RBP12.2□□□□□ -0.46
APTX-207ENST00000397172 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
APTX-207ENST00000397172 MYRIPQ8NFW9 859 aa12.2□□□□□ -0.46
APTX-207ENST00000397172 KNSTRNQ9Y448 316 aa12.2□□□□□ -0.46
APTX-207ENST00000397172 PIP4K2BP78356 416 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
APTX-207ENST00000397172 NUCB2P80303 420 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 BRINP3Q76B58 766 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
APTX-207ENST00000397172 PANK3Q9H999 370 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 ATP7BP35670 1465 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 KIF16BQ96L93 1317 aa12.18□□□□□ -0.46
APTX-207ENST00000397172 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
APTX-207ENST00000397172 PRR36Q9H6K5 1346 aa12.17□□□□□ -0.46
APTX-207ENST00000397172 USP32Q8NFA0 1604 aa12.17□□□□□ -0.46
APTX-207ENST00000397172 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
APTX-207ENST00000397172 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
APTX-207ENST00000397172 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
APTX-207ENST00000397172 COG6Q9Y2V7 657 aa12.17□□□□□ -0.46
APTX-207ENST00000397172 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
APTX-207ENST00000397172 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
APTX-207ENST00000397172 BCAR3O75815 825 aa12.16□□□□□ -0.46
APTX-207ENST00000397172 PPP2R1AP30153 589 aa12.16□□□□□ -0.46
APTX-207ENST00000397172 GTF2F1P35269 517 aaKnown RBP eCLIP12.16□□□□□ -0.46
APTX-207ENST00000397172 XPCQ01831 940 aaPredicted RBP12.16□□□□□ -0.46
APTX-207ENST00000397172 ORAI2Q96SN7 254 aa12.16□□□□□ -0.46
APTX-207ENST00000397172 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
APTX-207ENST00000397172 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
APTX-207ENST00000397172 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
APTX-207ENST00000397172 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
APTX-207ENST00000397172 CCDC66A2RUB6 948 aa12.15□□□□□ -0.46
APTX-207ENST00000397172 CHAF1AQ13111 956 aaPredicted RBP12.15□□□□□ -0.46
APTX-207ENST00000397172 PRDM10Q9NQV6 1147 aa12.15□□□□□ -0.46
APTX-207ENST00000397172 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
APTX-207ENST00000397172 KIF1AQ12756 1690 aa12.15□□□□□ -0.46
APTX-207ENST00000397172 ITSN1Q15811 1721 aa12.14□□□□□ -0.47
APTX-207ENST00000397172 PTMAP06454 111 aaKnown RBP12.14□□□□□ -0.47
APTX-207ENST00000397172 FEZ1Q99689 392 aa12.14□□□□□ -0.47
APTX-207ENST00000397172 DISP3Q9P2K9 1392 aa12.14□□□□□ -0.47
APTX-207ENST00000397172 K7ELQ4 463 aaPredicted RBP12.14□□□□□ -0.47
APTX-207ENST00000397172 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
APTX-207ENST00000397172 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
APTX-207ENST00000397172 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
APTX-207ENST00000397172 PDCL2Q8N4E4 241 aa12.13□□□□□ -0.47
APTX-207ENST00000397172 TSPYL1Q9H0U9 437 aa12.13□□□□□ -0.47
APTX-207ENST00000397172 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
APTX-207ENST00000397172 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
APTX-207ENST00000397172 PPIP5K1Q6PFW1 1433 aa12.13□□□□□ -0.47
APTX-207ENST00000397172 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
APTX-207ENST00000397172 POLR3AO14802 1390 aaPredicted RBP12.12□□□□□ -0.47
APTX-207ENST00000397172 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
APTX-207ENST00000397172 NHSL1Q5SYE7 1610 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 SYAP1Q96A49 352 aaPredicted RBP12.11□□□□□ -0.47
APTX-207ENST00000397172 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
APTX-207ENST00000397172 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
APTX-207ENST00000397172 FOXO3O43524 673 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 ABCB7O75027 752 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 PHF14O94880 888 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
APTX-207ENST00000397172 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
APTX-207ENST00000397172 FAM193AP78312 1265 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 GABPB1Q06547 395 aaPredicted RBP12.11□□□□□ -0.47
APTX-207ENST00000397172 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
APTX-207ENST00000397172 ZSCAN23Q3MJ62 389 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
APTX-207ENST00000397172 MBD3O95983 291 aa12.1□□□□□ -0.47
APTX-207ENST00000397172 PSME1Q06323 249 aa12.1□□□□□ -0.47
APTX-207ENST00000397172 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
APTX-207ENST00000397172 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
APTX-207ENST00000397172 DNAJC2Q99543 621 aaKnown RBP12.1□□□□□ -0.47
APTX-207ENST00000397172 TPM3P06753 285 aa12.09□□□□□ -0.47
APTX-207ENST00000397172 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
APTX-207ENST00000397172 LRSAM1Q6UWE0 723 aa12.09□□□□□ -0.47
APTX-207ENST00000397172 ACEP12821 1306 aa12.09□□□□□ -0.47
APTX-207ENST00000397172 APAF1O14727 1248 aa12.08□□□□□ -0.47
APTX-207ENST00000397172 HSPA1LP34931 641 aa12.08□□□□□ -0.47
APTX-207ENST00000397172 CBX1P83916 185 aa12.08□□□□□ -0.47
APTX-207ENST00000397172 ZNF771Q7L3S4 317 aaPredicted RBP12.08□□□□□ -0.47
APTX-207ENST00000397172 FAM184AQ8NB25 1140 aa12.08□□□□□ -0.47
APTX-207ENST00000397172 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.47
APTX-207ENST00000397172 CHMP4BQ9H444 224 aaKnown RBP12.08□□□□□ -0.47
APTX-207ENST00000397172 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.47
APTX-207ENST00000397172 PXDNQ92626 1479 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 MVPQ14764 893 aaKnown RBP12.08□□□□□ -0.48
APTX-207ENST00000397172 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
APTX-207ENST00000397172 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
APTX-207ENST00000397172 KRT28Q7Z3Y7 464 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
APTX-207ENST00000397172 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 PCDHB15Q9Y5E8 787 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 SBNO1A3KN83 1393 aa12.08□□□□□ -0.48
APTX-207ENST00000397172 CPSF1Q10570 1443 aaKnown RBP12.08□□□□□ -0.48
APTX-207ENST00000397172 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
APTX-207ENST00000397172 UVSSAQ2YD98 709 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms