RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 GCC1Q96CN9 775 aa7.67□□□□□ -1.18
RAPGEF4-203ENST00000397087 PLIN1O60240 522 aa7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 U2AF1L5P0DN76 240 aaPredicted RBP7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 U2AF1Q01081 240 aaKnown RBP eCLIP7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 POLA2Q14181 598 aa7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 ARXQ96QS3 562 aa7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 GLI3P10071 1580 aa7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 MRPL50Q8N5N7 158 aaKnown RBP7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 ZBTB40Q9NUA8 1239 aa7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 NEUROD2Q15784 382 aa7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 API5Q9BZZ5 524 aaKnown RBP7.66□□□□□ -1.18
RAPGEF4-203ENST00000397087 CHL1O00533 1208 aa7.65□□□□□ -1.18
RAPGEF4-203ENST00000397087 PPM1GO15355 546 aaPredicted RBP7.65□□□□□ -1.18
RAPGEF4-203ENST00000397087 SKAP1Q86WV1 359 aa7.65□□□□□ -1.18
RAPGEF4-203ENST00000397087 CCDC146Q8IYE0 955 aa7.65□□□□□ -1.18
RAPGEF4-203ENST00000397087 ACEP12821 1306 aa7.65□□□□□ -1.18
RAPGEF4-203ENST00000397087 C20orf194Q5TEA3 1177 aa7.65□□□□□ -1.18
RAPGEF4-203ENST00000397087 TRHP20396 242 aaPredicted RBP7.65□□□□□ -1.19
RAPGEF4-203ENST00000397087 GGNBP2Q9H3C7 697 aa7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 COL15A1P39059 1388 aa7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 ZBTB47Q9UFB7 747 aaPredicted RBP7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 SHANK3Q9BYB0 1731 aa7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 VAMP4O75379 141 aa7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 CANXP27824 592 aaKnown RBP7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 TXNDC2Q86VQ3 553 aa7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 KLHL34Q8N239 644 aa7.64□□□□□ -1.19
RAPGEF4-203ENST00000397087 RIPK4P57078 832 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 HEG1Q9ULI3 1381 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 BCAR3O75815 825 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 WAPLQ7Z5K2 1190 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 GAS2L2Q8NHY3 880 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 RGPD2P0DJD1 1756 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 AOX1Q06278 1338 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 NUP188Q5SRE5 1749 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 RREB1Q92766 1687 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 AMOTL2Q9Y2J4 779 aa7.63□□□□□ -1.19
RAPGEF4-203ENST00000397087 PXDNQ92626 1479 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 RGS3P49796 1198 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 NUCB1Q02818 461 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 TICAM2Q86XR7 235 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 STRCQ7RTU9 1775 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 C5P01031 1676 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 KCNA6P17658 529 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 EIF4A2Q14240 407 aaKnown RBP7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 KCNH5Q8NCM2 988 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 CPDO75976 1380 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 CAPN15O75808 1086 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 TRIM27P14373 513 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 PRKAR2BP31323 418 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 STK26Q9P289 416 aa7.62□□□□□ -1.19
RAPGEF4-203ENST00000397087 PROM2Q8N271 834 aa7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 TMEM94Q12767 1356 aa7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 MAP3K5Q99683 1374 aa7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 ANKLE2Q86XL3 938 aa7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 SSH1Q8WYL5 1049 aa7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 ABCB7O75027 752 aa7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 EXOSC9Q06265 439 aaKnown RBP7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 NME9Q86XW9 330 aa7.61□□□□□ -1.19
RAPGEF4-203ENST00000397087 C1orf167Q5SNV9 1468 aa7.6□□□□□ -1.19
RAPGEF4-203ENST00000397087 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
RAPGEF4-203ENST00000397087 SPEF2Q9C093 1822 aa7.6□□□□□ -1.19
RAPGEF4-203ENST00000397087 IGHDP01880 384 aa7.6□□□□□ -1.19
RAPGEF4-203ENST00000397087 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
RAPGEF4-203ENST00000397087 BMP2KLQ5H9B9 411 aa7.6□□□□□ -1.19
RAPGEF4-203ENST00000397087 SNX21Q969T3 373 aa7.6□□□□□ -1.19
RAPGEF4-203ENST00000397087 DEKP35659 375 aaKnown RBP7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 SLC4A3P48751 1232 aa7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 RPAP2Q8IXW5 612 aaPredicted RBP7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 TBC1D32Q96NH3 1257 aa7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 PAK3O75914 559 aaPredicted RBP7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 OSBPL3Q9H4L5 887 aa7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 SAFB2Q14151 953 aaKnown RBP eCLIP7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 NUTM2DQ5VT03 806 aaPredicted RBP7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 MBIPQ9NS73 344 aa7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 RGPD5Q99666 1765 aa7.59□□□□□ -1.19
RAPGEF4-203ENST00000397087 RLBP1P12271 317 aa7.59□□□□□ -1.2
RAPGEF4-203ENST00000397087 SMC4Q9NTJ3 1288 aa7.59□□□□□ -1.2
RAPGEF4-203ENST00000397087 IP6K1Q92551 441 aa7.58□□□□□ -1.2
RAPGEF4-203ENST00000397087 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.58□□□□□ -1.2
RAPGEF4-203ENST00000397087 PCDHB15Q9Y5E8 787 aa7.58□□□□□ -1.2
RAPGEF4-203ENST00000397087 AHDC1Q5TGY3 1603 aaPredicted RBP7.58□□□□□ -1.2
RAPGEF4-203ENST00000397087 MAP3K19Q56UN5 1328 aa7.58□□□□□ -1.2
RAPGEF4-203ENST00000397087 PTMSP20962 102 aa7.58□□□□□ -1.2
RAPGEF4-203ENST00000397087 ARFGEF2Q9Y6D5 1785 aa7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 CCT4P50991 539 aaKnown RBP7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 HOXC9P31274 260 aa7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 NOB1Q9ULX3 412 aaKnown RBP7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 COL14A1Q05707 1796 aaKnown RBP7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 AK9Q5TCS8 1911 aa7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 FTSJ3Q8IY81 847 aaKnown RBP7.57□□□□□ -1.2
RAPGEF4-203ENST00000397087 TNS3Q68CZ2 1445 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 BECN1Q14457 450 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 TWISTNBQ3B726 338 aaPredicted RBP7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 AMOTQ4VCS5 1084 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 CLEC17AQ6ZS10 378 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 ANKRD44Q8N8A2 993 aa7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 FRAT1Q92837 279 aaPredicted RBP7.56□□□□□ -1.2
RAPGEF4-203ENST00000397087 PHACTR3Q96KR7 559 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms