RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 PPRC1Q5VV67 1664 aaKnown RBP17.92■□□□□ 0.46
RAPGEF4-201ENST00000397081 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
RAPGEF4-201ENST00000397081 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
RAPGEF4-201ENST00000397081 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
RAPGEF4-201ENST00000397081 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
RAPGEF4-201ENST00000397081 FIBPO43427 364 aa17.91■□□□□ 0.46
RAPGEF4-201ENST00000397081 SYAP1Q96A49 352 aaPredicted RBP17.9■□□□□ 0.46
RAPGEF4-201ENST00000397081 KIF2CQ99661 725 aa17.9■□□□□ 0.46
RAPGEF4-201ENST00000397081 EID1Q9Y6B2 187 aa17.9■□□□□ 0.46
RAPGEF4-201ENST00000397081 PPIP5K1Q6PFW1 1433 aa17.9■□□□□ 0.46
RAPGEF4-201ENST00000397081 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
RAPGEF4-201ENST00000397081 IL16Q14005 1332 aa17.9■□□□□ 0.46
RAPGEF4-201ENST00000397081 FRMPD1Q5SYB0 1578 aa17.9■□□□□ 0.46
RAPGEF4-201ENST00000397081 DRC7Q8IY82 874 aa17.89■□□□□ 0.46
RAPGEF4-201ENST00000397081 FAM177BA6PVY3 158 aa17.89■□□□□ 0.45
RAPGEF4-201ENST00000397081 HAP1P54257 671 aaPredicted RBP17.89■□□□□ 0.45
RAPGEF4-201ENST00000397081 USP26Q9BXU7 913 aa17.89■□□□□ 0.45
RAPGEF4-201ENST00000397081 ZMYM3Q14202 1370 aa17.89■□□□□ 0.45
RAPGEF4-201ENST00000397081 AMPHP49418 695 aa17.88■□□□□ 0.45
RAPGEF4-201ENST00000397081 RNF17Q9BXT8 1623 aaKnown RBP17.88■□□□□ 0.45
RAPGEF4-201ENST00000397081 NUTM1Q86Y26 1132 aa17.88■□□□□ 0.45
RAPGEF4-201ENST00000397081 VPS37CA5D8V6 355 aaPredicted RBP17.87■□□□□ 0.45
RAPGEF4-201ENST00000397081 SPC24Q8NBT2 197 aa17.87■□□□□ 0.45
RAPGEF4-201ENST00000397081 TMX3Q96JJ7 454 aa17.87■□□□□ 0.45
RAPGEF4-201ENST00000397081 TSPY26PQ9H489 355 aa17.86■□□□□ 0.45
RAPGEF4-201ENST00000397081 CWC22Q9HCG8 908 aaKnown RBP17.86■□□□□ 0.45
RAPGEF4-201ENST00000397081 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
RAPGEF4-201ENST00000397081 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
RAPGEF4-201ENST00000397081 TSC1Q92574 1164 aa17.86■□□□□ 0.45
RAPGEF4-201ENST00000397081 DCTPP1Q9H773 170 aa17.86■□□□□ 0.45
RAPGEF4-201ENST00000397081 NSFL1CQ9UNZ2 370 aaKnown RBP17.86■□□□□ 0.45
RAPGEF4-201ENST00000397081 GOLGA6L4A6NEF3 574 aa17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 TMEM63CQ9P1W3 806 aa17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 NAP1L2Q9ULW6 460 aaPredicted RBP17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 KIF1BO60333 1816 aa17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 NSD2O96028 1365 aa17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 MROH1Q8NDA8 1641 aa17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 FOXO3O43524 673 aa17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
RAPGEF4-201ENST00000397081 SURF6O75683 361 aaKnown RBP17.84■□□□□ 0.45
RAPGEF4-201ENST00000397081 CCDC39Q9UFE4 941 aa17.84■□□□□ 0.45
RAPGEF4-201ENST00000397081 CCDC9Q9Y3X0 531 aaKnown RBP17.84■□□□□ 0.45
RAPGEF4-201ENST00000397081 C17orf53Q8N3J3 647 aaPredicted RBP17.84■□□□□ 0.45
RAPGEF4-201ENST00000397081 CEP85Q6P2H3 762 aa17.84■□□□□ 0.45
RAPGEF4-201ENST00000397081 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
RAPGEF4-201ENST00000397081 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.45
RAPGEF4-201ENST00000397081 G2E3Q7L622 706 aa17.83■□□□□ 0.45
RAPGEF4-201ENST00000397081 GPT2Q8TD30 523 aa17.83■□□□□ 0.44
RAPGEF4-201ENST00000397081 PDCL3Q9H2J4 239 aa17.83■□□□□ 0.44
RAPGEF4-201ENST00000397081 GNAI2P04899 355 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 HSP90AB2PQ58FF8 381 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 ANKRD44Q8N8A2 993 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 NUDT16Q96DE0 195 aaKnown RBP17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 LRRCC1Q9C099 1032 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 TNRQ92752 1358 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 NGDNQ8NEJ9 315 aaKnown RBP17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 DEPDC5O75140 1603 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 MBD3O95983 291 aa17.82■□□□□ 0.44
RAPGEF4-201ENST00000397081 OFD1O75665 1012 aa17.81■□□□□ 0.44
RAPGEF4-201ENST00000397081 ARHGAP45Q92619 1136 aa17.81■□□□□ 0.44
RAPGEF4-201ENST00000397081 TTC12Q9H892 705 aaPredicted RBP17.81■□□□□ 0.44
RAPGEF4-201ENST00000397081 PDE1AP54750 535 aa17.81■□□□□ 0.44
RAPGEF4-201ENST00000397081 PHF14O94880 888 aa17.8■□□□□ 0.44
RAPGEF4-201ENST00000397081 SMC3Q9UQE7 1217 aa17.8■□□□□ 0.44
RAPGEF4-201ENST00000397081 GLI2P10070 1586 aa17.8■□□□□ 0.44
RAPGEF4-201ENST00000397081 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
RAPGEF4-201ENST00000397081 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
RAPGEF4-201ENST00000397081 RIMS2Q9UQ26 1411 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 MX1P20591 662 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 FOSBP53539 338 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 CHAF1AQ13111 956 aaPredicted RBP17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 CSPP1Q1MSJ5 1256 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 LRSAM1Q6UWE0 723 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 HCLS1P14317 486 aaPredicted RBP17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 FERMT3Q86UX7 667 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 VWDEQ8N2E2 1590 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 FGD1P98174 961 aa17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 RBM33Q96EV2 1170 aaKnown RBP17.79■□□□□ 0.44
RAPGEF4-201ENST00000397081 CPA1P15085 419 aa17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 MSH6P52701 1360 aa17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 GADD45BO75293 160 aaPredicted RBP17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 UBTFL1P0CB47 393 aaPredicted RBP17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 PALD1Q9ULE6 856 aa17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 LAMC1P11047 1609 aa17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 JARID2Q92833 1246 aaPredicted RBP17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 SPG7Q9UQ90 795 aa17.78■□□□□ 0.44
RAPGEF4-201ENST00000397081 RICTORQ6R327 1708 aa17.77■□□□□ 0.44
RAPGEF4-201ENST00000397081 ZKSCAN5Q9Y2L8 839 aa17.77■□□□□ 0.44
RAPGEF4-201ENST00000397081 CAMSAP1Q5T5Y3 1602 aa17.77■□□□□ 0.43
RAPGEF4-201ENST00000397081 DIAPH3Q9NSV4 1193 aa17.77■□□□□ 0.43
RAPGEF4-201ENST00000397081 IL13P35225 146 aa17.76■□□□□ 0.43
RAPGEF4-201ENST00000397081 ZHX1Q9UKY1 873 aaPredicted RBP17.76■□□□□ 0.43
RAPGEF4-201ENST00000397081 LMTK2Q8IWU2 1503 aa17.76■□□□□ 0.43
RAPGEF4-201ENST00000397081 ZNF592Q92610 1267 aa17.76■□□□□ 0.43
RAPGEF4-201ENST00000397081 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
RAPGEF4-201ENST00000397081 USP48Q86UV5 1035 aa17.75■□□□□ 0.43
RAPGEF4-201ENST00000397081 PPP1R9BQ96SB3 815 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms