RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 CHAMP1Q96JM3 812 aa17.98■□□□□ 0.47
CCNF-202ENST00000397066 MEIS3Q99687 375 aa17.98■□□□□ 0.47
CCNF-202ENST00000397066 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
CCNF-202ENST00000397066 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
CCNF-202ENST00000397066 CFAP74Q9C0B2 1584 aa17.97■□□□□ 0.47
CCNF-202ENST00000397066 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
CCNF-202ENST00000397066 CEP85Q6P2H3 762 aa17.97■□□□□ 0.47
CCNF-202ENST00000397066 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
CCNF-202ENST00000397066 POGZQ7Z3K3 1410 aa17.96■□□□□ 0.47
CCNF-202ENST00000397066 LRRC7Q96NW7 1537 aa17.96■□□□□ 0.47
CCNF-202ENST00000397066 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
CCNF-202ENST00000397066 SYAP1Q96A49 352 aaPredicted RBP17.96■□□□□ 0.47
CCNF-202ENST00000397066 MIS18AQ9NYP9 233 aa17.96■□□□□ 0.47
CCNF-202ENST00000397066 ABCC3O15438 1527 aa17.96■□□□□ 0.46
CCNF-202ENST00000397066 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
CCNF-202ENST00000397066 MLECQ14165 292 aa17.95■□□□□ 0.46
CCNF-202ENST00000397066 TSHZ3Q63HK5 1081 aa17.95■□□□□ 0.46
CCNF-202ENST00000397066 PDCL3Q9H2J4 239 aa17.95■□□□□ 0.46
CCNF-202ENST00000397066 MED14O60244 1454 aa17.95■□□□□ 0.46
CCNF-202ENST00000397066 PLCB2Q00722 1185 aa17.95■□□□□ 0.46
CCNF-202ENST00000397066 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
CCNF-202ENST00000397066 MBD3O95983 291 aa17.94■□□□□ 0.46
CCNF-202ENST00000397066 CLEC17AQ6ZS10 378 aa17.94■□□□□ 0.46
CCNF-202ENST00000397066 CCDC39Q9UFE4 941 aa17.94■□□□□ 0.46
CCNF-202ENST00000397066 EXOC6BQ9Y2D4 811 aa17.94■□□□□ 0.46
CCNF-202ENST00000397066 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
CCNF-202ENST00000397066 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
CCNF-202ENST00000397066 CAMSAP1Q5T5Y3 1602 aa17.94■□□□□ 0.46
CCNF-202ENST00000397066 F6X3S4 739 aa17.93■□□□□ 0.46
CCNF-202ENST00000397066 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
CCNF-202ENST00000397066 STK31Q9BXU1 1019 aa17.93■□□□□ 0.46
CCNF-202ENST00000397066 IBTKQ9P2D0 1353 aaPredicted RBP17.93■□□□□ 0.46
CCNF-202ENST00000397066 CSPP1Q1MSJ5 1256 aa17.93■□□□□ 0.46
CCNF-202ENST00000397066 GPT2Q8TD30 523 aa17.93■□□□□ 0.46
CCNF-202ENST00000397066 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
CCNF-202ENST00000397066 UQCRHLA0A096LP55 91 aa17.92■□□□□ 0.46
CCNF-202ENST00000397066 UQCRHP07919 91 aa17.92■□□□□ 0.46
CCNF-202ENST00000397066 LRSAM1Q6UWE0 723 aa17.92■□□□□ 0.46
CCNF-202ENST00000397066 MPNDQ8N594 471 aa17.92■□□□□ 0.46
CCNF-202ENST00000397066 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
CCNF-202ENST00000397066 TMX3Q96JJ7 454 aa17.92■□□□□ 0.46
CCNF-202ENST00000397066 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
CCNF-202ENST00000397066 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
CCNF-202ENST00000397066 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
CCNF-202ENST00000397066 MSH6P52701 1360 aa17.91■□□□□ 0.46
CCNF-202ENST00000397066 TSPY26PQ9H489 355 aa17.91■□□□□ 0.46
CCNF-202ENST00000397066 ARHGEF28Q8N1W1 1705 aaKnown RBP17.91■□□□□ 0.46
CCNF-202ENST00000397066 NOL7Q9UMY1 257 aaKnown RBP17.91■□□□□ 0.46
CCNF-202ENST00000397066 TMEM63CQ9P1W3 806 aa17.9■□□□□ 0.46
CCNF-202ENST00000397066 NEXMIFQ5QGS0 1516 aa17.9■□□□□ 0.46
CCNF-202ENST00000397066 MLH3Q9UHC1 1453 aa17.9■□□□□ 0.46
CCNF-202ENST00000397066 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
CCNF-202ENST00000397066 PDE1AP54750 535 aa17.9■□□□□ 0.46
CCNF-202ENST00000397066 HS1BP3Q53T59 392 aa17.9■□□□□ 0.46
CCNF-202ENST00000397066 MCM2P49736 904 aa17.89■□□□□ 0.46
CCNF-202ENST00000397066 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.46
CCNF-202ENST00000397066 ESF1Q9H501 851 aaKnown RBP17.89■□□□□ 0.45
CCNF-202ENST00000397066 PHF14O94880 888 aa17.89■□□□□ 0.45
CCNF-202ENST00000397066 GNAI2P04899 355 aa17.89■□□□□ 0.45
CCNF-202ENST00000397066 GDPD2Q9HCC8 539 aa17.89■□□□□ 0.45
CCNF-202ENST00000397066 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
CCNF-202ENST00000397066 ZKSCAN5Q9Y2L8 839 aa17.89■□□□□ 0.45
CCNF-202ENST00000397066 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
CCNF-202ENST00000397066 PTPRCP08575 1304 aa17.88■□□□□ 0.45
CCNF-202ENST00000397066 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
CCNF-202ENST00000397066 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
CCNF-202ENST00000397066 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
CCNF-202ENST00000397066 PTPRMP28827 1452 aa17.87■□□□□ 0.45
CCNF-202ENST00000397066 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
CCNF-202ENST00000397066 CCT4P50991 539 aaKnown RBP17.87■□□□□ 0.45
CCNF-202ENST00000397066 NSFL1CQ9UNZ2 370 aaKnown RBP17.87■□□□□ 0.45
CCNF-202ENST00000397066 KIF24Q5T7B8 1368 aa17.87■□□□□ 0.45
CCNF-202ENST00000397066 AK9Q5TCS8 1911 aa17.87■□□□□ 0.45
CCNF-202ENST00000397066 RTL1A6NKG5 1358 aa17.86■□□□□ 0.45
CCNF-202ENST00000397066 ZDHHC9Q9Y397 364 aa17.86■□□□□ 0.45
CCNF-202ENST00000397066 MX1P20591 662 aa17.86■□□□□ 0.45
CCNF-202ENST00000397066 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
CCNF-202ENST00000397066 HECW2Q9P2P5 1572 aa17.85■□□□□ 0.45
CCNF-202ENST00000397066 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
CCNF-202ENST00000397066 G2E3Q7L622 706 aa17.84■□□□□ 0.45
CCNF-202ENST00000397066 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
CCNF-202ENST00000397066 CHL1O00533 1208 aa17.84■□□□□ 0.45
CCNF-202ENST00000397066 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.44
CCNF-202ENST00000397066 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.44
CCNF-202ENST00000397066 ZNF500O60304 480 aaPredicted RBP17.82■□□□□ 0.44
CCNF-202ENST00000397066 IL1RAPL2Q9NP60 686 aa17.82■□□□□ 0.44
CCNF-202ENST00000397066 EDC4Q6P2E9 1401 aaKnown RBP17.82■□□□□ 0.44
CCNF-202ENST00000397066 GNAI3P08754 354 aa17.82■□□□□ 0.44
CCNF-202ENST00000397066 MCM5P33992 734 aa17.82■□□□□ 0.44
CCNF-202ENST00000397066 HSP90AB2PQ58FF8 381 aa17.82■□□□□ 0.44
CCNF-202ENST00000397066 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
CCNF-202ENST00000397066 PDLIM2Q96JY6 352 aa17.81■□□□□ 0.44
CCNF-202ENST00000397066 PALD1Q9ULE6 856 aa17.81■□□□□ 0.44
CCNF-202ENST00000397066 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
CCNF-202ENST00000397066 FOXO3O43524 673 aa17.8■□□□□ 0.44
CCNF-202ENST00000397066 SASS6Q6UVJ0 657 aa17.8■□□□□ 0.44
CCNF-202ENST00000397066 TERF1P54274 439 aa17.8■□□□□ 0.44
CCNF-202ENST00000397066 ARHGEF40Q8TER5 1519 aa17.8■□□□□ 0.44
CCNF-202ENST00000397066 BRD1O95696 1058 aa17.79■□□□□ 0.44
CCNF-202ENST00000397066 AMPHP49418 695 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms