RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 ZNF521Q96K83 1311 aa18.54■□□□□ 0.56
GAPDH-203ENST00000396858 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
GAPDH-203ENST00000396858 FNBP4Q8N3X1 1017 aaPredicted RBP18.54■□□□□ 0.56
GAPDH-203ENST00000396858 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
GAPDH-203ENST00000396858 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
GAPDH-203ENST00000396858 RIPK4P57078 832 aa18.53■□□□□ 0.56
GAPDH-203ENST00000396858 USP21Q9UK80 565 aa18.53■□□□□ 0.56
GAPDH-203ENST00000396858 CCDC9Q9Y3X0 531 aaKnown RBP18.53■□□□□ 0.56
GAPDH-203ENST00000396858 MAP3K5Q99683 1374 aa18.53■□□□□ 0.56
GAPDH-203ENST00000396858 SPATA31A1Q5TZJ5 1347 aa18.52■□□□□ 0.56
GAPDH-203ENST00000396858 SPATA31A5Q5VU36 1347 aa18.52■□□□□ 0.56
GAPDH-203ENST00000396858 SPATA31A7Q8IWB4 1347 aa18.52■□□□□ 0.56
GAPDH-203ENST00000396858 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
GAPDH-203ENST00000396858 GLI3P10071 1580 aa18.51■□□□□ 0.55
GAPDH-203ENST00000396858 IL2RBP14784 551 aa18.51■□□□□ 0.55
GAPDH-203ENST00000396858 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
GAPDH-203ENST00000396858 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
GAPDH-203ENST00000396858 ATRNO75882 1429 aa18.5■□□□□ 0.55
GAPDH-203ENST00000396858 TNS2Q63HR2 1409 aa18.5■□□□□ 0.55
GAPDH-203ENST00000396858 VPS72Q15906 364 aa18.5■□□□□ 0.55
GAPDH-203ENST00000396858 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
GAPDH-203ENST00000396858 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
GAPDH-203ENST00000396858 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
GAPDH-203ENST00000396858 THUMPD2Q9BTF0 503 aaKnown RBP18.5■□□□□ 0.55
GAPDH-203ENST00000396858 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
GAPDH-203ENST00000396858 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
GAPDH-203ENST00000396858 DCTN1Q14203 1278 aa18.48■□□□□ 0.55
GAPDH-203ENST00000396858 THSD7AQ9UPZ6 1657 aa18.47■□□□□ 0.55
GAPDH-203ENST00000396858 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
GAPDH-203ENST00000396858 ADAMTS7Q9UKP4 1686 aa18.47■□□□□ 0.55
GAPDH-203ENST00000396858 C1orf141Q5JVX7 400 aa18.46■□□□□ 0.55
GAPDH-203ENST00000396858 MCM10Q7L590 875 aa18.46■□□□□ 0.55
GAPDH-203ENST00000396858 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
GAPDH-203ENST00000396858 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
GAPDH-203ENST00000396858 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
GAPDH-203ENST00000396858 PCDH11XQ9BZA7 1347 aa18.46■□□□□ 0.55
GAPDH-203ENST00000396858 PCDH11YQ9BZA8 1340 aa18.46■□□□□ 0.55
GAPDH-203ENST00000396858 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
GAPDH-203ENST00000396858 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
GAPDH-203ENST00000396858 AKAP4Q5JQC9 854 aa18.45■□□□□ 0.54
GAPDH-203ENST00000396858 THRAP3Q9Y2W1 955 aaKnown RBP18.45■□□□□ 0.54
GAPDH-203ENST00000396858 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
GAPDH-203ENST00000396858 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
GAPDH-203ENST00000396858 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
GAPDH-203ENST00000396858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.54
GAPDH-203ENST00000396858 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
GAPDH-203ENST00000396858 CYP27B1O15528 508 aa18.43■□□□□ 0.54
GAPDH-203ENST00000396858 PHKG2P15735 406 aa18.43■□□□□ 0.54
GAPDH-203ENST00000396858 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
GAPDH-203ENST00000396858 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
GAPDH-203ENST00000396858 ZCRB1Q8TBF4 217 aaKnown RBP18.43■□□□□ 0.54
GAPDH-203ENST00000396858 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
GAPDH-203ENST00000396858 MRC1P22897 1456 aa18.42■□□□□ 0.54
GAPDH-203ENST00000396858 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
GAPDH-203ENST00000396858 WDR63Q8IWG1 891 aa18.42■□□□□ 0.54
GAPDH-203ENST00000396858 TRPC5Q9UL62 973 aaPredicted RBP18.42■□□□□ 0.54
GAPDH-203ENST00000396858 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
GAPDH-203ENST00000396858 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
GAPDH-203ENST00000396858 CDCA7Q9BWT1 371 aaPredicted RBP18.41■□□□□ 0.54
GAPDH-203ENST00000396858 E9PSI1 815 aa18.4■□□□□ 0.54
GAPDH-203ENST00000396858 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
GAPDH-203ENST00000396858 SLFN5Q08AF3 891 aa18.4■□□□□ 0.54
GAPDH-203ENST00000396858 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
GAPDH-203ENST00000396858 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
GAPDH-203ENST00000396858 IL16Q14005 1332 aa18.4■□□□□ 0.54
GAPDH-203ENST00000396858 A0A0G2JS52 829 aa18.39■□□□□ 0.53
GAPDH-203ENST00000396858 MYT1Q01538 1121 aa18.39■□□□□ 0.53
GAPDH-203ENST00000396858 CALD1Q05682 793 aaKnown RBP18.39■□□□□ 0.53
GAPDH-203ENST00000396858 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
GAPDH-203ENST00000396858 TSR2Q969E8 191 aaKnown RBP18.39■□□□□ 0.53
GAPDH-203ENST00000396858 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
GAPDH-203ENST00000396858 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
GAPDH-203ENST00000396858 SIPA1L3O60292 1781 aaPredicted RBP18.39■□□□□ 0.53
GAPDH-203ENST00000396858 DOT1LQ8TEK3 1739 aa18.38■□□□□ 0.53
GAPDH-203ENST00000396858 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
GAPDH-203ENST00000396858 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
GAPDH-203ENST00000396858 DDX54Q8TDD1 881 aaKnown RBP18.38■□□□□ 0.53
GAPDH-203ENST00000396858 LAS1LQ9Y4W2 734 aaKnown RBP18.38■□□□□ 0.53
GAPDH-203ENST00000396858 DDB1Q16531 1140 aa18.37■□□□□ 0.53
GAPDH-203ENST00000396858 LGR6Q9HBX8 967 aa18.37■□□□□ 0.53
GAPDH-203ENST00000396858 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
GAPDH-203ENST00000396858 KDM3BQ7LBC6 1761 aa18.36■□□□□ 0.53
GAPDH-203ENST00000396858 MYH16Q9H6N6 1097 aa18.36■□□□□ 0.53
GAPDH-203ENST00000396858 QTRT2Q9H974 415 aaKnown RBP18.36■□□□□ 0.53
GAPDH-203ENST00000396858 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
GAPDH-203ENST00000396858 EXOC5O00471 708 aa18.35■□□□□ 0.53
GAPDH-203ENST00000396858 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
GAPDH-203ENST00000396858 ZNF853P0CG23 659 aa18.34■□□□□ 0.53
GAPDH-203ENST00000396858 GNAI1P63096 354 aa18.34■□□□□ 0.53
GAPDH-203ENST00000396858 TRMT2AQ8IZ69 625 aaKnown RBP18.34■□□□□ 0.53
GAPDH-203ENST00000396858 DCAF5Q96JK2 942 aa18.34■□□□□ 0.53
GAPDH-203ENST00000396858 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
GAPDH-203ENST00000396858 TEFQ10587 303 aa18.33■□□□□ 0.52
GAPDH-203ENST00000396858 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
GAPDH-203ENST00000396858 PAPPAQ13219 1627 aa18.33■□□□□ 0.52
GAPDH-203ENST00000396858 TSPYL4Q9UJ04 414 aa18.32■□□□□ 0.52
GAPDH-203ENST00000396858 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
GAPDH-203ENST00000396858 MARCH10Q8NA82 808 aaPredicted RBP18.31■□□□□ 0.52
GAPDH-203ENST00000396858 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
GAPDH-203ENST00000396858 CHL1O00533 1208 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms