RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
PDXDC1-202ENST00000396410 USP19O94966 1318 aa14.34□□□□□ -0.11
PDXDC1-202ENST00000396410 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
PDXDC1-202ENST00000396410 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
PDXDC1-202ENST00000396410 ITSN1Q15811 1721 aa14.33□□□□□ -0.11
PDXDC1-202ENST00000396410 PIK3R4Q99570 1358 aa14.33□□□□□ -0.12
PDXDC1-202ENST00000396410 EIF2S2P20042 333 aaKnown RBP14.33□□□□□ -0.12
PDXDC1-202ENST00000396410 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
PDXDC1-202ENST00000396410 F6X3S4 739 aa14.33□□□□□ -0.12
PDXDC1-202ENST00000396410 NRXN3Q9Y4C0 1643 aa14.32□□□□□ -0.12
PDXDC1-202ENST00000396410 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
PDXDC1-202ENST00000396410 TEFQ10587 303 aa14.32□□□□□ -0.12
PDXDC1-202ENST00000396410 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
PDXDC1-202ENST00000396410 CHMP5Q9NZZ3 219 aa14.31□□□□□ -0.12
PDXDC1-202ENST00000396410 HOXC9P31274 260 aa14.31□□□□□ -0.12
PDXDC1-202ENST00000396410 PTPRUQ92729 1446 aa14.31□□□□□ -0.12
PDXDC1-202ENST00000396410 KIF13AQ9H1H9 1805 aa14.31□□□□□ -0.12
PDXDC1-202ENST00000396410 PTCH1Q13635 1447 aa14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 GNAI2P04899 355 aa14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 INTS3Q68E01 1043 aaKnown RBP14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 MEIS3Q99687 375 aa14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 UBR1Q8IWV7 1749 aa14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 OVOS2A0A0J9YW53 1432 aa14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 OVOS2Q6IE36 1432 aa14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 XPCQ01831 940 aaPredicted RBP14.3□□□□□ -0.12
PDXDC1-202ENST00000396410 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 CHMP4AQ9BY43 222 aa14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 KIAA0232Q92628 1395 aa14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 SMARCA5O60264 1052 aaPredicted RBP14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 GNAI3P08754 354 aa14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 HDGFL1Q5TGJ6 251 aa14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
PDXDC1-202ENST00000396410 TBC1D9Q6ZT07 1266 aa14.28□□□□□ -0.12
PDXDC1-202ENST00000396410 DCTPP1Q9H773 170 aa14.28□□□□□ -0.12
PDXDC1-202ENST00000396410 OS9Q13438 667 aaPredicted RBP14.27□□□□□ -0.12
PDXDC1-202ENST00000396410 KCNH5Q8NCM2 988 aa14.27□□□□□ -0.12
PDXDC1-202ENST00000396410 GZF1Q9H116 711 aaPredicted RBP14.27□□□□□ -0.12
PDXDC1-202ENST00000396410 MSH6P52701 1360 aa14.27□□□□□ -0.12
PDXDC1-202ENST00000396410 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.12
PDXDC1-202ENST00000396410 HTATSF1O43719 755 aaKnown RBP14.27□□□□□ -0.12
PDXDC1-202ENST00000396410 USP31Q70CQ4 1352 aa14.27□□□□□ -0.12
PDXDC1-202ENST00000396410 FLIIQ13045 1269 aa14.27□□□□□ -0.13
PDXDC1-202ENST00000396410 SETD1AO15047 1707 aaKnown RBP14.27□□□□□ -0.13
PDXDC1-202ENST00000396410 G2E3Q7L622 706 aa14.27□□□□□ -0.13
PDXDC1-202ENST00000396410 KNDC1Q76NI1 1749 aa14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 GOLGA6L22H0YM25 854 aa14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 PROSER2Q86WR7 435 aaPredicted RBP14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 SIRT2Q8IXJ6 389 aa14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 C16orf71Q8IYS4 520 aaPredicted RBP14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 KIF24Q5T7B8 1368 aa14.26□□□□□ -0.13
PDXDC1-202ENST00000396410 UBTFL1P0CB47 393 aaPredicted RBP14.25□□□□□ -0.13
PDXDC1-202ENST00000396410 PLEKHO1Q53GL0 409 aaPredicted RBP14.25□□□□□ -0.13
PDXDC1-202ENST00000396410 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
PDXDC1-202ENST00000396410 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
PDXDC1-202ENST00000396410 GBP4Q96PP9 640 aa14.25□□□□□ -0.13
PDXDC1-202ENST00000396410 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
PDXDC1-202ENST00000396410 RILPL2Q969X0 211 aa14.25□□□□□ -0.13
PDXDC1-202ENST00000396410 EXOC6BQ9Y2D4 811 aa14.24□□□□□ -0.13
PDXDC1-202ENST00000396410 MAP3K5Q99683 1374 aa14.24□□□□□ -0.13
PDXDC1-202ENST00000396410 REC8O95072 547 aa14.24□□□□□ -0.13
PDXDC1-202ENST00000396410 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
PDXDC1-202ENST00000396410 TTC22Q5TAA0 569 aa14.24□□□□□ -0.13
PDXDC1-202ENST00000396410 PLEKHM2Q8IWE5 1019 aa14.24□□□□□ -0.13
PDXDC1-202ENST00000396410 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
PDXDC1-202ENST00000396410 MCCP23508 829 aa14.23□□□□□ -0.13
PDXDC1-202ENST00000396410 C3P01024 1663 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 ANKARQ7Z5J8 1434 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 DDX11L8A8MPP1 907 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 ST18O60284 1047 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 IP6K1Q92551 441 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 BTBD11A6QL63 1104 aa14.22□□□□□ -0.13
PDXDC1-202ENST00000396410 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.13
PDXDC1-202ENST00000396410 SRCIN1Q9C0H9 1055 aa14.21□□□□□ -0.13
PDXDC1-202ENST00000396410 AKAP12Q02952 1782 aa14.21□□□□□ -0.14
PDXDC1-202ENST00000396410 K7ELQ4 463 aaPredicted RBP14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 RTL1A6NKG5 1358 aa14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 IL17REQ8NFR9 667 aa14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 OTUD7AQ8TE49 926 aaPredicted RBP14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 LRRC59Q96AG4 307 aaKnown RBP14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 SLIT1O75093 1534 aa14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 ATF3P18847 181 aa14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 MCM4P33991 863 aa14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 RABEP1Q15276 862 aa14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
PDXDC1-202ENST00000396410 SURF6O75683 361 aaKnown RBP14.19□□□□□ -0.14
PDXDC1-202ENST00000396410 SDSP20132 328 aa14.19□□□□□ -0.14
PDXDC1-202ENST00000396410 C9orf78Q9NZ63 289 aaPredicted RBP14.19□□□□□ -0.14
PDXDC1-202ENST00000396410 CRB1P82279 1406 aa14.19□□□□□ -0.14
PDXDC1-202ENST00000396410 NLRP2Q9NX02 1062 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 FER1L4A9Z1Z3 1794 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 ARHGAP23Q9P227 1491 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
PDXDC1-202ENST00000396410 NBPF6Q5VWK0 638 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms