RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 E9PSI1 815 aa20.13■□□□□ 0.81
VAMP1-202ENST00000396308 TATP17735 454 aaPredicted RBP20.13■□□□□ 0.81
VAMP1-202ENST00000396308 RTF1Q92541 710 aaKnown RBP20.13■□□□□ 0.81
VAMP1-202ENST00000396308 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
VAMP1-202ENST00000396308 CARD10Q9BWT7 1032 aa20.11■□□□□ 0.81
VAMP1-202ENST00000396308 MYH16Q9H6N6 1097 aa20.11■□□□□ 0.81
VAMP1-202ENST00000396308 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.1■□□□□ 0.81
VAMP1-202ENST00000396308 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
VAMP1-202ENST00000396308 IL16Q14005 1332 aa20.1■□□□□ 0.81
VAMP1-202ENST00000396308 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
VAMP1-202ENST00000396308 MEX3CQ5U5Q3 659 aaKnown RBP20.1■□□□□ 0.81
VAMP1-202ENST00000396308 RGS17Q9UGC6 210 aaPredicted RBP20.1■□□□□ 0.81
VAMP1-202ENST00000396308 MTHFSDQ2M296 383 aaKnown RBP20.09■□□□□ 0.81
VAMP1-202ENST00000396308 TRIM35Q9UPQ4 493 aa20.09■□□□□ 0.81
VAMP1-202ENST00000396308 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
VAMP1-202ENST00000396308 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.81
VAMP1-202ENST00000396308 LRRC37A3O60309 1634 aa20.08■□□□□ 0.8
VAMP1-202ENST00000396308 MEGF6O75095 1541 aa20.07■□□□□ 0.8
VAMP1-202ENST00000396308 SLIT2O94813 1529 aa20.07■□□□□ 0.8
VAMP1-202ENST00000396308 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
VAMP1-202ENST00000396308 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
VAMP1-202ENST00000396308 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
VAMP1-202ENST00000396308 LARP1Q6PKG0 1096 aaKnown RBP20.07■□□□□ 0.8
VAMP1-202ENST00000396308 OVOS2A0A0G2JMS6 1433 aa20.06■□□□□ 0.8
VAMP1-202ENST00000396308 CDCA7LQ96GN5 454 aa20.06■□□□□ 0.8
VAMP1-202ENST00000396308 C8orf37Q96NL8 207 aa20.06■□□□□ 0.8
VAMP1-202ENST00000396308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.06■□□□□ 0.8
VAMP1-202ENST00000396308 LRP6O75581 1613 aa20.05■□□□□ 0.8
VAMP1-202ENST00000396308 IL2RBP14784 551 aa20.05■□□□□ 0.8
VAMP1-202ENST00000396308 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
VAMP1-202ENST00000396308 GNAI1P63096 354 aa20.04■□□□□ 0.8
VAMP1-202ENST00000396308 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
VAMP1-202ENST00000396308 SCN11AQ9UI33 1791 aa20.03■□□□□ 0.8
VAMP1-202ENST00000396308 IFT57Q9NWB7 429 aa20.02■□□□□ 0.8
VAMP1-202ENST00000396308 USP35Q9P2H5 1018 aa20.02■□□□□ 0.8
VAMP1-202ENST00000396308 CCDC9Q9Y3X0 531 aaKnown RBP20.02■□□□□ 0.8
VAMP1-202ENST00000396308 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.79
VAMP1-202ENST00000396308 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.79
VAMP1-202ENST00000396308 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
VAMP1-202ENST00000396308 CDCA7Q9BWT1 371 aaPredicted RBP20.01■□□□□ 0.79
VAMP1-202ENST00000396308 THRAP3Q9Y2W1 955 aaKnown RBP20.01■□□□□ 0.79
VAMP1-202ENST00000396308 LAS1LQ9Y4W2 734 aaKnown RBP20.01■□□□□ 0.79
VAMP1-202ENST00000396308 SHANK3Q9BYB0 1731 aa20■□□□□ 0.79
VAMP1-202ENST00000396308 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
VAMP1-202ENST00000396308 MCM10Q7L590 875 aa20■□□□□ 0.79
VAMP1-202ENST00000396308 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
VAMP1-202ENST00000396308 TRMT2AQ8IZ69 625 aaKnown RBP19.99■□□□□ 0.79
VAMP1-202ENST00000396308 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
VAMP1-202ENST00000396308 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
VAMP1-202ENST00000396308 ADAMTS7Q9UKP4 1686 aa19.99■□□□□ 0.79
VAMP1-202ENST00000396308 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
VAMP1-202ENST00000396308 NEFLP07196 543 aa19.98■□□□□ 0.79
VAMP1-202ENST00000396308 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
VAMP1-202ENST00000396308 ZCRB1Q8TBF4 217 aaKnown RBP19.98■□□□□ 0.79
VAMP1-202ENST00000396308 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
VAMP1-202ENST00000396308 SPATA31A1Q5TZJ5 1347 aa19.97■□□□□ 0.79
VAMP1-202ENST00000396308 SIPA1L3O60292 1781 aaPredicted RBP19.96■□□□□ 0.79
VAMP1-202ENST00000396308 TEFQ10587 303 aa19.96■□□□□ 0.79
VAMP1-202ENST00000396308 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
VAMP1-202ENST00000396308 FNBP4Q8N3X1 1017 aaPredicted RBP19.96■□□□□ 0.79
VAMP1-202ENST00000396308 SPINK5Q9NQ38 1064 aaPredicted RBP19.96■□□□□ 0.79
VAMP1-202ENST00000396308 USP21Q9UK80 565 aa19.96■□□□□ 0.79
VAMP1-202ENST00000396308 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
VAMP1-202ENST00000396308 SPATA31A5Q5VU36 1347 aa19.96■□□□□ 0.79
VAMP1-202ENST00000396308 SPATA31A7Q8IWB4 1347 aa19.96■□□□□ 0.79
VAMP1-202ENST00000396308 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
VAMP1-202ENST00000396308 CT47B1P0C2W7 299 aaPredicted RBP19.95■□□□□ 0.78
VAMP1-202ENST00000396308 TNS2Q63HR2 1409 aa19.94■□□□□ 0.78
VAMP1-202ENST00000396308 BCL9LQ86UU0 1499 aa19.94■□□□□ 0.78
VAMP1-202ENST00000396308 PHKG2P15735 406 aa19.94■□□□□ 0.78
VAMP1-202ENST00000396308 VPS72Q15906 364 aa19.94■□□□□ 0.78
VAMP1-202ENST00000396308 TSR2Q969E8 191 aaKnown RBP19.94■□□□□ 0.78
VAMP1-202ENST00000396308 BABAM1Q9NWV8 329 aa19.94■□□□□ 0.78
VAMP1-202ENST00000396308 CEMIPQ8WUJ3 1361 aa19.94■□□□□ 0.78
VAMP1-202ENST00000396308 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
VAMP1-202ENST00000396308 AFF2P51816 1311 aa19.93■□□□□ 0.78
VAMP1-202ENST00000396308 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
VAMP1-202ENST00000396308 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
VAMP1-202ENST00000396308 DCAF5Q96JK2 942 aa19.92■□□□□ 0.78
VAMP1-202ENST00000396308 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
VAMP1-202ENST00000396308 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
VAMP1-202ENST00000396308 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
VAMP1-202ENST00000396308 BARGINQ6ZT62 677 aa19.91■□□□□ 0.78
VAMP1-202ENST00000396308 IL17REQ8NFR9 667 aa19.91■□□□□ 0.78
VAMP1-202ENST00000396308 MBIPQ9NS73 344 aa19.91■□□□□ 0.78
VAMP1-202ENST00000396308 MRC1P22897 1456 aa19.91■□□□□ 0.78
VAMP1-202ENST00000396308 EXOC5O00471 708 aa19.9■□□□□ 0.78
VAMP1-202ENST00000396308 SUPT16HQ9Y5B9 1047 aaKnown RBP19.9■□□□□ 0.78
VAMP1-202ENST00000396308 CHL1O00533 1208 aa19.89■□□□□ 0.77
VAMP1-202ENST00000396308 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.77
VAMP1-202ENST00000396308 EXOSC9Q06265 439 aaKnown RBP19.89■□□□□ 0.77
VAMP1-202ENST00000396308 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.89■□□□□ 0.77
VAMP1-202ENST00000396308 DDX54Q8TDD1 881 aaKnown RBP19.89■□□□□ 0.77
VAMP1-202ENST00000396308 CYP27B1O15528 508 aa19.88■□□□□ 0.77
VAMP1-202ENST00000396308 DDB1Q16531 1140 aa19.88■□□□□ 0.77
VAMP1-202ENST00000396308 ZNF428Q96B54 188 aa19.88■□□□□ 0.77
VAMP1-202ENST00000396308 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
VAMP1-202ENST00000396308 A0A0G2JS52 829 aa19.87■□□□□ 0.77
VAMP1-202ENST00000396308 MYT1Q01538 1121 aa19.87■□□□□ 0.77
VAMP1-202ENST00000396308 LGR6Q9HBX8 967 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms