RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 GCP02774 474 aa9.81□□□□□ -0.84
LDHA-204ENST00000396222 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
LDHA-204ENST00000396222 RRP7AQ9Y3A4 280 aaKnown RBP9.81□□□□□ -0.84
LDHA-204ENST00000396222 TNS3Q68CZ2 1445 aa9.81□□□□□ -0.84
LDHA-204ENST00000396222 ANP32EQ9BTT0 268 aa9.8□□□□□ -0.84
LDHA-204ENST00000396222 SLIT3O75094 1523 aa9.8□□□□□ -0.84
LDHA-204ENST00000396222 TRPM3Q9HCF6 1732 aaPredicted RBP9.8□□□□□ -0.84
LDHA-204ENST00000396222 RRP1P56182 461 aaKnown RBP9.8□□□□□ -0.84
LDHA-204ENST00000396222 XPCQ01831 940 aaPredicted RBP9.8□□□□□ -0.84
LDHA-204ENST00000396222 ZC3H15Q8WU90 426 aaKnown RBP9.8□□□□□ -0.84
LDHA-204ENST00000396222 PHRF1Q9P1Y6 1649 aaKnown RBP9.8□□□□□ -0.84
LDHA-204ENST00000396222 IGSF1Q8N6C5 1336 aa9.79□□□□□ -0.84
LDHA-204ENST00000396222 BRINP3Q76B58 766 aa9.79□□□□□ -0.84
LDHA-204ENST00000396222 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
LDHA-204ENST00000396222 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
LDHA-204ENST00000396222 NFAT5O94916 1531 aa9.79□□□□□ -0.84
LDHA-204ENST00000396222 PEAK1Q9H792 1746 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 KDRP35968 1356 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 SPDYE2BA6NHP3 402 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 SPDYE6P0CI01 402 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 GNAI1P63096 354 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 ARHGEF25Q86VW2 580 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 RTF1Q92541 710 aaKnown RBP9.78□□□□□ -0.84
LDHA-204ENST00000396222 XIRP1Q702N8 1843 aaKnown RBP9.78□□□□□ -0.84
LDHA-204ENST00000396222 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 ALS2Q96Q42 1657 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 ZMYND15Q9H091 742 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 TRIM35Q9UPQ4 493 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 SSUH2Q9Y2M2 353 aa9.78□□□□□ -0.84
LDHA-204ENST00000396222 MARF1Q9Y4F3 1742 aaKnown RBP9.77□□□□□ -0.84
LDHA-204ENST00000396222 LTN1O94822 1766 aa9.77□□□□□ -0.85
LDHA-204ENST00000396222 ABCC6O95255 1503 aa9.77□□□□□ -0.85
LDHA-204ENST00000396222 ZBTB7CA1YPR0 619 aa9.77□□□□□ -0.85
LDHA-204ENST00000396222 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
LDHA-204ENST00000396222 RGPD1P0DJD0 1748 aa9.77□□□□□ -0.85
LDHA-204ENST00000396222 EYA1Q99502 592 aa9.77□□□□□ -0.85
LDHA-204ENST00000396222 PXDNQ92626 1479 aa9.77□□□□□ -0.85
LDHA-204ENST00000396222 PHACTR3Q96KR7 559 aa9.76□□□□□ -0.85
LDHA-204ENST00000396222 IFT57Q9NWB7 429 aa9.76□□□□□ -0.85
LDHA-204ENST00000396222 SOS2Q07890 1332 aaPredicted RBP9.76□□□□□ -0.85
LDHA-204ENST00000396222 MS4A1P11836 297 aa9.75□□□□□ -0.85
LDHA-204ENST00000396222 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
LDHA-204ENST00000396222 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
LDHA-204ENST00000396222 AMOTQ4VCS5 1084 aa9.75□□□□□ -0.85
LDHA-204ENST00000396222 LTV1Q96GA3 475 aaPredicted RBP9.75□□□□□ -0.85
LDHA-204ENST00000396222 PLEKHG2Q9H7P9 1386 aa9.74□□□□□ -0.85
LDHA-204ENST00000396222 STK25O00506 426 aa9.74□□□□□ -0.85
LDHA-204ENST00000396222 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
LDHA-204ENST00000396222 B4GALNT3Q6L9W6 998 aa9.74□□□□□ -0.85
LDHA-204ENST00000396222 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
LDHA-204ENST00000396222 CPDO75976 1380 aa9.74□□□□□ -0.85
LDHA-204ENST00000396222 DLG5Q8TDM6 1919 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 ANKRD24Q8TF21 1146 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 LRRC59Q96AG4 307 aaKnown RBP9.73□□□□□ -0.85
LDHA-204ENST00000396222 GNAT3A8MTJ3 354 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 ZC3H6P61129 1189 aaKnown RBP9.73□□□□□ -0.85
LDHA-204ENST00000396222 AAMPQ13685 434 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 PLEKHO1Q53GL0 409 aaPredicted RBP9.73□□□□□ -0.85
LDHA-204ENST00000396222 ARID3AQ99856 593 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 CHMP4AQ9BY43 222 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 C1orf115Q9H7X2 142 aa9.73□□□□□ -0.85
LDHA-204ENST00000396222 LAS1LQ9Y4W2 734 aaKnown RBP9.73□□□□□ -0.85
LDHA-204ENST00000396222 TOM1O60784 492 aa9.72□□□□□ -0.85
LDHA-204ENST00000396222 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
LDHA-204ENST00000396222 DDX17Q92841 729 aaKnown RBP9.72□□□□□ -0.85
LDHA-204ENST00000396222 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
LDHA-204ENST00000396222 BABAM1Q9NWV8 329 aa9.72□□□□□ -0.85
LDHA-204ENST00000396222 ZBTB47Q9UFB7 747 aaPredicted RBP9.72□□□□□ -0.85
LDHA-204ENST00000396222 ERBB3P21860 1342 aa9.72□□□□□ -0.85
LDHA-204ENST00000396222 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.85
LDHA-204ENST00000396222 PLEKHG5O94827 1062 aa9.71□□□□□ -0.85
LDHA-204ENST00000396222 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.85
LDHA-204ENST00000396222 RARSP54136 660 aaKnown RBP9.71□□□□□ -0.85
LDHA-204ENST00000396222 ALDH1L2Q3SY69 923 aa9.71□□□□□ -0.85
LDHA-204ENST00000396222 KIF16BQ96L93 1317 aa9.71□□□□□ -0.85
LDHA-204ENST00000396222 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.85
LDHA-204ENST00000396222 FAM208AQ9UK61 1670 aaKnown RBP9.71□□□□□ -0.86
LDHA-204ENST00000396222 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 EXOSC9Q06265 439 aaKnown RBP9.7□□□□□ -0.86
LDHA-204ENST00000396222 MTHFSDQ2M296 383 aaKnown RBP9.7□□□□□ -0.86
LDHA-204ENST00000396222 C1orf141Q5JVX7 400 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 NBPF6Q5VWK0 638 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 RAPGEF4Q8WZA2 1011 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 TSR2Q969E8 191 aaKnown RBP9.7□□□□□ -0.86
LDHA-204ENST00000396222 NBPF4Q96M43 638 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 EXOC6Q8TAG9 804 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 PRDM11Q9NQV5 511 aa9.7□□□□□ -0.86
LDHA-204ENST00000396222 LTBP4Q8N2S1 1624 aa9.69□□□□□ -0.86
LDHA-204ENST00000396222 NCAPD2Q15021 1401 aa9.69□□□□□ -0.86
LDHA-204ENST00000396222 KIAA0232Q92628 1395 aa9.69□□□□□ -0.86
LDHA-204ENST00000396222 SOS1Q07889 1333 aaPredicted RBP9.69□□□□□ -0.86
LDHA-204ENST00000396222 PLIN1O60240 522 aa9.69□□□□□ -0.86
LDHA-204ENST00000396222 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
LDHA-204ENST00000396222 CHMP4BQ9H444 224 aaKnown RBP9.69□□□□□ -0.86
LDHA-204ENST00000396222 SMC4Q9NTJ3 1288 aa9.69□□□□□ -0.86
LDHA-204ENST00000396222 TATP17735 454 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms