RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
CDRT1-204ENST00000395906 SYNMO15061 1565 aa11.74□□□□□ -0.53
CDRT1-204ENST00000395906 REC8O95072 547 aa11.74□□□□□ -0.53
CDRT1-204ENST00000395906 FAM53CQ9NYF3 392 aa11.74□□□□□ -0.53
CDRT1-204ENST00000395906 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
CDRT1-204ENST00000395906 MROH2AA6NES4 1674 aa11.73□□□□□ -0.53
CDRT1-204ENST00000395906 STK26Q9P289 416 aa11.73□□□□□ -0.53
CDRT1-204ENST00000395906 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
CDRT1-204ENST00000395906 GOLGA6L6A8MZA4 724 aa11.73□□□□□ -0.53
CDRT1-204ENST00000395906 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
CDRT1-204ENST00000395906 CASQ1P31415 396 aa11.72□□□□□ -0.53
CDRT1-204ENST00000395906 C17orf53Q8N3J3 647 aaPredicted RBP11.72□□□□□ -0.53
CDRT1-204ENST00000395906 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
CDRT1-204ENST00000395906 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
CDRT1-204ENST00000395906 FAM43BQ6ZT52 329 aaPredicted RBP11.72□□□□□ -0.53
CDRT1-204ENST00000395906 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.53
CDRT1-204ENST00000395906 KIF16BQ96L93 1317 aa11.71□□□□□ -0.53
CDRT1-204ENST00000395906 K7ELQ4 463 aaPredicted RBP11.71□□□□□ -0.53
CDRT1-204ENST00000395906 SLFN5Q08AF3 891 aa11.71□□□□□ -0.53
CDRT1-204ENST00000395906 MUM1L1Q5H9M0 696 aa11.71□□□□□ -0.53
CDRT1-204ENST00000395906 TMX1Q9H3N1 280 aa11.71□□□□□ -0.53
CDRT1-204ENST00000395906 KIF1BO60333 1816 aa11.71□□□□□ -0.53
CDRT1-204ENST00000395906 SYCE3A1L190 88 aa11.71□□□□□ -0.54
CDRT1-204ENST00000395906 DONSONQ9NYP3 566 aa11.71□□□□□ -0.54
CDRT1-204ENST00000395906 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.54
CDRT1-204ENST00000395906 TTC12Q9H892 705 aaPredicted RBP11.7□□□□□ -0.54
CDRT1-204ENST00000395906 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
CDRT1-204ENST00000395906 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.7□□□□□ -0.54
CDRT1-204ENST00000395906 AGLP35573 1532 aa11.7□□□□□ -0.54
CDRT1-204ENST00000395906 NKTRP30414 1462 aaKnown RBP11.7□□□□□ -0.54
CDRT1-204ENST00000395906 BCAR3O75815 825 aa11.7□□□□□ -0.54
CDRT1-204ENST00000395906 NUCB2P80303 420 aa11.7□□□□□ -0.54
CDRT1-204ENST00000395906 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
CDRT1-204ENST00000395906 RNF214Q8ND24 703 aa11.7□□□□□ -0.54
CDRT1-204ENST00000395906 GPT2Q8TD30 523 aa11.7□□□□□ -0.54
CDRT1-204ENST00000395906 TSPY26PQ9H489 355 aa11.7□□□□□ -0.54
CDRT1-204ENST00000395906 MYO5BQ9ULV0 1848 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 GPATCH11Q8N954 259 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 NOL10Q9BSC4 688 aaKnown RBP11.69□□□□□ -0.54
CDRT1-204ENST00000395906 TRPM1Q7Z4N2 1603 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 ERVK-7P63135 1459 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 KIF1CO43896 1103 aaKnown RBP11.69□□□□□ -0.54
CDRT1-204ENST00000395906 KIAA1524Q8TCG1 905 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 TESK2Q96S53 571 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 PLCD4Q9BRC7 762 aa11.69□□□□□ -0.54
CDRT1-204ENST00000395906 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
CDRT1-204ENST00000395906 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
CDRT1-204ENST00000395906 ZNF397Q8NF99 534 aaPredicted RBP11.68□□□□□ -0.54
CDRT1-204ENST00000395906 TMEM63CQ9P1W3 806 aa11.68□□□□□ -0.54
CDRT1-204ENST00000395906 RAI14Q9P0K7 980 aa11.68□□□□□ -0.54
CDRT1-204ENST00000395906 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.68□□□□□ -0.54
CDRT1-204ENST00000395906 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
CDRT1-204ENST00000395906 COG6Q9Y2V7 657 aa11.68□□□□□ -0.54
CDRT1-204ENST00000395906 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
CDRT1-204ENST00000395906 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 GOLGA6L1Q8N7Z2 621 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 ADGRB3O60242 1522 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 PRPF40AO75400 957 aaKnown RBP11.67□□□□□ -0.54
CDRT1-204ENST00000395906 MNS1Q8NEH6 495 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 KIF1BPQ96EK5 621 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 POLKQ9UBT6 870 aa11.67□□□□□ -0.54
CDRT1-204ENST00000395906 REREQ9P2R6 1566 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 MADDQ8WXG6 1647 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 MYO1CO00159 1063 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 GOLIM4O00461 696 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 TPM3P06753 285 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 GYS2P54840 703 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 TXLNBQ8N3L3 684 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 JRKLQ9Y4A0 524 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 CYP2E1P05181 493 aaPredicted RBP11.66□□□□□ -0.54
CDRT1-204ENST00000395906 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
CDRT1-204ENST00000395906 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
CDRT1-204ENST00000395906 C14orf93Q9H972 538 aaKnown RBP11.66□□□□□ -0.54
CDRT1-204ENST00000395906 MBD3O95983 291 aa11.65□□□□□ -0.54
CDRT1-204ENST00000395906 SYT10Q6XYQ8 523 aa11.65□□□□□ -0.54
CDRT1-204ENST00000395906 MPNDQ8N594 471 aa11.65□□□□□ -0.54
CDRT1-204ENST00000395906 PANK1Q8TE04 598 aa11.65□□□□□ -0.54
CDRT1-204ENST00000395906 TOMM22Q9NS69 142 aa11.65□□□□□ -0.54
CDRT1-204ENST00000395906 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
CDRT1-204ENST00000395906 PCDHB15Q9Y5E8 787 aa11.65□□□□□ -0.54
CDRT1-204ENST00000395906 MAP2K1Q02750 393 aaPredicted RBP11.65□□□□□ -0.55
CDRT1-204ENST00000395906 GPRASP1Q5JY77 1395 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 ZC3H13Q5T200 1668 aaKnown RBP11.64□□□□□ -0.55
CDRT1-204ENST00000395906 IRF6O14896 467 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 CCDC91Q7Z6B0 441 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 MED4Q9NPJ6 270 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 TNRQ92752 1358 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 CD2BP2O95400 341 aaKnown RBP11.64□□□□□ -0.55
CDRT1-204ENST00000395906 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 KIF2CQ99661 725 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 CXorf56Q9H5V9 222 aa11.64□□□□□ -0.55
CDRT1-204ENST00000395906 LTKP29376 864 aa11.63□□□□□ -0.55
CDRT1-204ENST00000395906 TDO2P48775 406 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms