RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PRIM1P49642 420 aaKnown RBP19.95■□□□□ 0.78
VCPKMT-201ENST00000395859 WDR90Q96KV7 1748 aa19.95■□□□□ 0.78
VCPKMT-201ENST00000395859 TOMM70O94826 608 aa19.94■□□□□ 0.78
VCPKMT-201ENST00000395859 PRELPP51888 382 aa19.94■□□□□ 0.78
VCPKMT-201ENST00000395859 ANKRD24Q8TF21 1146 aa19.94■□□□□ 0.78
VCPKMT-201ENST00000395859 CCNL1Q9UK58 526 aaPredicted RBP19.94■□□□□ 0.78
VCPKMT-201ENST00000395859 MON2Q7Z3U7 1717 aa19.93■□□□□ 0.78
VCPKMT-201ENST00000395859 IGSF1Q8N6C5 1336 aa19.92■□□□□ 0.78
VCPKMT-201ENST00000395859 DDX54Q8TDD1 881 aaKnown RBP19.91■□□□□ 0.78
VCPKMT-201ENST00000395859 C5P01031 1676 aa19.91■□□□□ 0.78
VCPKMT-201ENST00000395859 KLRG1Q96E93 195 aa19.9■□□□□ 0.78
VCPKMT-201ENST00000395859 EVC2Q86UK5 1308 aa19.9■□□□□ 0.78
VCPKMT-201ENST00000395859 MSH5O43196 834 aa19.89■□□□□ 0.77
VCPKMT-201ENST00000395859 TAF1LQ8IZX4 1826 aa19.88■□□□□ 0.77
VCPKMT-201ENST00000395859 TOGARAM1Q9Y4F4 1720 aa19.88■□□□□ 0.77
VCPKMT-201ENST00000395859 FAM208AQ9UK61 1670 aaKnown RBP19.88■□□□□ 0.77
VCPKMT-201ENST00000395859 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
VCPKMT-201ENST00000395859 SYTL4Q96C24 671 aaPredicted RBP19.88■□□□□ 0.77
VCPKMT-201ENST00000395859 CAPN15O75808 1086 aa19.87■□□□□ 0.77
VCPKMT-201ENST00000395859 SBNO2Q9Y2G9 1366 aa19.86■□□□□ 0.77
VCPKMT-201ENST00000395859 AMIGO3Q86WK7 504 aa19.86■□□□□ 0.77
VCPKMT-201ENST00000395859 FLAD1Q8NFF5 587 aa19.86■□□□□ 0.77
VCPKMT-201ENST00000395859 CD163L1Q9NR16 1453 aa19.86■□□□□ 0.77
VCPKMT-201ENST00000395859 TNS4Q8IZW8 715 aa19.85■□□□□ 0.77
VCPKMT-201ENST00000395859 HTRA3P83110 453 aa19.84■□□□□ 0.77
VCPKMT-201ENST00000395859 NME9Q86XW9 330 aa19.84■□□□□ 0.77
VCPKMT-201ENST00000395859 KIAA1551Q9HCM1 1747 aa19.84■□□□□ 0.77
VCPKMT-201ENST00000395859 USP47Q96K76 1375 aa19.83■□□□□ 0.77
VCPKMT-201ENST00000395859 RBM46Q8TBY0 533 aaKnown RBP19.83■□□□□ 0.77
VCPKMT-201ENST00000395859 NMRK2Q9NPI5 230 aa19.83■□□□□ 0.77
VCPKMT-201ENST00000395859 WWC3Q9ULE0 1092 aa19.83■□□□□ 0.77
VCPKMT-201ENST00000395859 MEGF6O75095 1541 aa19.82■□□□□ 0.76
VCPKMT-201ENST00000395859 UBR3Q6ZT12 1888 aa19.82■□□□□ 0.76
VCPKMT-201ENST00000395859 IP6K1Q92551 441 aa19.82■□□□□ 0.76
VCPKMT-201ENST00000395859 C4BP0C0L5 1744 aa19.81■□□□□ 0.76
VCPKMT-201ENST00000395859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.8■□□□□ 0.76
VCPKMT-201ENST00000395859 ZCRB1Q8TBF4 217 aaKnown RBP19.8■□□□□ 0.76
VCPKMT-201ENST00000395859 KIF13BQ9NQT8 1826 aa19.8■□□□□ 0.76
VCPKMT-201ENST00000395859 SLC34A2O95436 690 aa19.79■□□□□ 0.76
VCPKMT-201ENST00000395859 PXDNLA1KZ92 1463 aa19.79■□□□□ 0.76
VCPKMT-201ENST00000395859 RGPD2P0DJD1 1756 aa19.77■□□□□ 0.76
VCPKMT-201ENST00000395859 HMGB2P26583 209 aaKnown RBP19.76■□□□□ 0.75
VCPKMT-201ENST00000395859 FSTL1Q12841 308 aa19.76■□□□□ 0.75
VCPKMT-201ENST00000395859 PALLDQ8WX93 1383 aa19.75■□□□□ 0.75
VCPKMT-201ENST00000395859 C10orf71Q711Q0 1435 aa19.75■□□□□ 0.75
VCPKMT-201ENST00000395859 SMIM5Q71RC9 77 aa19.74■□□□□ 0.75
VCPKMT-201ENST00000395859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
VCPKMT-201ENST00000395859 MAP2P11137 1827 aaKnown RBP19.73■□□□□ 0.75
VCPKMT-201ENST00000395859 EDC4Q6P2E9 1401 aaKnown RBP19.73■□□□□ 0.75
VCPKMT-201ENST00000395859 BRCA1P38398 1863 aaKnown RBP19.72■□□□□ 0.75
VCPKMT-201ENST00000395859 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-201ENST00000395859 N4BP2Q86UW6 1770 aaPredicted RBP19.71■□□□□ 0.75
VCPKMT-201ENST00000395859 NSD3Q9BZ95 1437 aa19.7■□□□□ 0.74
VCPKMT-201ENST00000395859 SSFA2P28290 1259 aa19.7■□□□□ 0.74
VCPKMT-201ENST00000395859 HOXC9P31274 260 aa19.7■□□□□ 0.74
VCPKMT-201ENST00000395859 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
VCPKMT-201ENST00000395859 TGFB2P61812 414 aa19.69■□□□□ 0.74
VCPKMT-201ENST00000395859 AK7Q96M32 723 aa19.69■□□□□ 0.74
VCPKMT-201ENST00000395859 MAP3K19Q56UN5 1328 aa19.69■□□□□ 0.74
VCPKMT-201ENST00000395859 PLEKHG2Q9H7P9 1386 aa19.68■□□□□ 0.74
VCPKMT-201ENST00000395859 ITGB4P16144 1822 aa19.67■□□□□ 0.74
VCPKMT-201ENST00000395859 PHF14O94880 888 aa19.67■□□□□ 0.74
VCPKMT-201ENST00000395859 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
VCPKMT-201ENST00000395859 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
VCPKMT-201ENST00000395859 PKD1L3Q7Z443 1732 aa19.67■□□□□ 0.74
VCPKMT-201ENST00000395859 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
VCPKMT-201ENST00000395859 HSPA1AP0DMV8 641 aaKnown RBP19.66■□□□□ 0.74
VCPKMT-201ENST00000395859 HSPA1BP0DMV9 641 aaKnown RBP19.66■□□□□ 0.74
VCPKMT-201ENST00000395859 BCS1LQ9Y276 419 aa19.66■□□□□ 0.74
VCPKMT-201ENST00000395859 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
VCPKMT-201ENST00000395859 C9orf131Q5VYM1 1079 aa19.65■□□□□ 0.74
VCPKMT-201ENST00000395859 ARHGAP27Q6ZUM4 889 aa19.65■□□□□ 0.74
VCPKMT-201ENST00000395859 LINC00116Q8NCU8 138 aa19.65■□□□□ 0.74
VCPKMT-201ENST00000395859 A0A1W2PP64 1363 aa19.65■□□□□ 0.74
VCPKMT-201ENST00000395859 A0A0G2JLW4 131 aa19.64■□□□□ 0.73
VCPKMT-201ENST00000395859 MMP10P09238 476 aa19.64■□□□□ 0.73
VCPKMT-201ENST00000395859 MPRIPQ6WCQ1 1025 aa19.64■□□□□ 0.73
VCPKMT-201ENST00000395859 SMARCC1Q92922 1105 aaPredicted RBP19.64■□□□□ 0.73
VCPKMT-201ENST00000395859 SLC12A5Q9H2X9 1139 aa19.64■□□□□ 0.73
VCPKMT-201ENST00000395859 TNRC6CQ9HCJ0 1690 aaKnown RBP19.63■□□□□ 0.73
VCPKMT-201ENST00000395859 KCNA3P22001 575 aa19.63■□□□□ 0.73
VCPKMT-201ENST00000395859 C16orf71Q8IYS4 520 aaPredicted RBP19.63■□□□□ 0.73
VCPKMT-201ENST00000395859 PCDH11XQ9BZA7 1347 aa19.62■□□□□ 0.73
VCPKMT-201ENST00000395859 PCDH11YQ9BZA8 1340 aa19.62■□□□□ 0.73
VCPKMT-201ENST00000395859 CYP27B1O15528 508 aa19.62■□□□□ 0.73
VCPKMT-201ENST00000395859 FBLN1P23142 703 aa19.62■□□□□ 0.73
VCPKMT-201ENST00000395859 HDGFL2Q7Z4V5 671 aaPredicted RBP19.62■□□□□ 0.73
VCPKMT-201ENST00000395859 RTL1A6NKG5 1358 aa19.61■□□□□ 0.73
VCPKMT-201ENST00000395859 DPEP1P16444 411 aa19.61■□□□□ 0.73
VCPKMT-201ENST00000395859 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
VCPKMT-201ENST00000395859 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
VCPKMT-201ENST00000395859 PIGBQ92521 554 aa19.6■□□□□ 0.73
VCPKMT-201ENST00000395859 ROCK2O75116 1388 aaKnown RBP19.59■□□□□ 0.73
VCPKMT-201ENST00000395859 KDM2BQ8NHM5 1336 aa19.59■□□□□ 0.73
VCPKMT-201ENST00000395859 LOC102724428A0A0B4J2F2 783 aa19.59■□□□□ 0.73
VCPKMT-201ENST00000395859 SIK1P57059 783 aa19.59■□□□□ 0.73
VCPKMT-201ENST00000395859 ITPK1Q13572 414 aa19.59■□□□□ 0.73
VCPKMT-201ENST00000395859 SMC1BQ8NDV3 1235 aa19.59■□□□□ 0.73
VCPKMT-201ENST00000395859 RRAGCQ9HB90 399 aa19.59■□□□□ 0.73
VCPKMT-201ENST00000395859 SBF1O95248 1867 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms