RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
MSH5-205ENST00000395853 PSMD1Q99460 953 aa11□□□□□ -0.65
MSH5-205ENST00000395853 SH3BP1Q9Y3L3 701 aa11□□□□□ -0.65
MSH5-205ENST00000395853 COL22A1Q8NFW1 1626 aaPredicted RBP11□□□□□ -0.65
MSH5-205ENST00000395853 HS1BP3Q53T59 392 aa11□□□□□ -0.65
MSH5-205ENST00000395853 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
MSH5-205ENST00000395853 MYCBPQ99417 103 aaPredicted RBP11□□□□□ -0.65
MSH5-205ENST00000395853 ATRNO75882 1429 aa10.99□□□□□ -0.65
MSH5-205ENST00000395853 IRF6O14896 467 aa10.99□□□□□ -0.65
MSH5-205ENST00000395853 XPCQ01831 940 aaPredicted RBP10.99□□□□□ -0.65
MSH5-205ENST00000395853 TESK2Q96S53 571 aa10.99□□□□□ -0.65
MSH5-205ENST00000395853 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
MSH5-205ENST00000395853 CEP83Q9Y592 693 aa10.99□□□□□ -0.65
MSH5-205ENST00000395853 NEXMIFQ5QGS0 1516 aa10.98□□□□□ -0.65
MSH5-205ENST00000395853 TNNT3P45378 269 aaPredicted RBP10.98□□□□□ -0.65
MSH5-205ENST00000395853 SATB1Q01826 763 aa10.98□□□□□ -0.65
MSH5-205ENST00000395853 C8orf34Q49A92 452 aa10.98□□□□□ -0.65
MSH5-205ENST00000395853 USP21Q9UK80 565 aa10.98□□□□□ -0.65
MSH5-205ENST00000395853 NOL7Q9UMY1 257 aaKnown RBP10.98□□□□□ -0.65
MSH5-205ENST00000395853 SETQ01105 290 aaPredicted RBP10.98□□□□□ -0.65
MSH5-205ENST00000395853 GABPB1Q06547 395 aaPredicted RBP10.98□□□□□ -0.65
MSH5-205ENST00000395853 SIRT1Q96EB6 747 aa10.98□□□□□ -0.65
MSH5-205ENST00000395853 CALCOCO1Q9P1Z2 691 aa10.98□□□□□ -0.65
MSH5-205ENST00000395853 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
MSH5-205ENST00000395853 RRP1P56182 461 aaKnown RBP10.97□□□□□ -0.65
MSH5-205ENST00000395853 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
MSH5-205ENST00000395853 CT47A1Q5JQC4 288 aaPredicted RBP10.97□□□□□ -0.65
MSH5-205ENST00000395853 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
MSH5-205ENST00000395853 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
MSH5-205ENST00000395853 MYRIPQ8NFW9 859 aa10.97□□□□□ -0.65
MSH5-205ENST00000395853 TMEM132AQ24JP5 1023 aa10.96□□□□□ -0.65
MSH5-205ENST00000395853 GOLIM4O00461 696 aa10.96□□□□□ -0.66
MSH5-205ENST00000395853 ADAMTS2O95450 1211 aa10.96□□□□□ -0.66
MSH5-205ENST00000395853 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.66
MSH5-205ENST00000395853 NCAPGQ9BPX3 1015 aa10.96□□□□□ -0.66
MSH5-205ENST00000395853 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.66
MSH5-205ENST00000395853 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
MSH5-205ENST00000395853 CCDC172P0C7W6 258 aa10.95□□□□□ -0.66
MSH5-205ENST00000395853 GTF2A1P52655 376 aaPredicted RBP10.95□□□□□ -0.66
MSH5-205ENST00000395853 SKAP1Q86WV1 359 aa10.95□□□□□ -0.66
MSH5-205ENST00000395853 MYOM2P54296 1465 aa10.95□□□□□ -0.66
MSH5-205ENST00000395853 KIF1BO60333 1816 aa10.95□□□□□ -0.66
MSH5-205ENST00000395853 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
MSH5-205ENST00000395853 MARF1Q9Y4F3 1742 aaKnown RBP10.94□□□□□ -0.66
MSH5-205ENST00000395853 RPGRIP1LQ68CZ1 1315 aa10.94□□□□□ -0.66
MSH5-205ENST00000395853 DDX11L8A8MPP1 907 aa10.94□□□□□ -0.66
MSH5-205ENST00000395853 NASPP49321 788 aaPredicted RBP10.94□□□□□ -0.66
MSH5-205ENST00000395853 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
MSH5-205ENST00000395853 PANK3Q9H999 370 aa10.94□□□□□ -0.66
MSH5-205ENST00000395853 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.94□□□□□ -0.66
MSH5-205ENST00000395853 GAS2L3Q86XJ1 694 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 MPNDQ8N594 471 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 PER1O15534 1290 aaPredicted RBP10.93□□□□□ -0.66
MSH5-205ENST00000395853 MCM5P33992 734 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 FEZ1Q99689 392 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 FEZ2Q9UHY8 353 aaPredicted RBP10.93□□□□□ -0.66
MSH5-205ENST00000395853 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 NBPF11Q86T75 865 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 PDCL2Q8N4E4 241 aa10.93□□□□□ -0.66
MSH5-205ENST00000395853 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
MSH5-205ENST00000395853 KTN1Q86UP2 1357 aaKnown RBP10.92□□□□□ -0.66
MSH5-205ENST00000395853 TMF1P82094 1093 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 ORAI2Q96SN7 254 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 UPF2Q9HAU5 1272 aaKnown RBP10.92□□□□□ -0.66
MSH5-205ENST00000395853 LRPPRCP42704 1394 aaKnown RBP10.92□□□□□ -0.66
MSH5-205ENST00000395853 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 BCL9LQ86UU0 1499 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 CDC42BPGQ6DT37 1551 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 ADGRF5Q8IZF2 1346 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 GTF2F1P35269 517 aaKnown RBP eCLIP10.92□□□□□ -0.66
MSH5-205ENST00000395853 HMGN5P82970 282 aaKnown RBP10.92□□□□□ -0.66
MSH5-205ENST00000395853 PNISRQ8TF01 805 aaKnown RBP10.92□□□□□ -0.66
MSH5-205ENST00000395853 PRDM16Q9HAZ2 1276 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 RAI14Q9P0K7 980 aa10.92□□□□□ -0.66
MSH5-205ENST00000395853 CTR9Q6PD62 1173 aa10.91□□□□□ -0.66
MSH5-205ENST00000395853 PRIMPOLQ96LW4 560 aa10.91□□□□□ -0.66
MSH5-205ENST00000395853 CFAP70Q5T0N1 1121 aa10.91□□□□□ -0.66
MSH5-205ENST00000395853 GPATCH11Q8N954 259 aa10.91□□□□□ -0.66
MSH5-205ENST00000395853 GJD4Q96KN9 370 aaPredicted RBP10.91□□□□□ -0.66
MSH5-205ENST00000395853 ZKSCAN5Q9Y2L8 839 aa10.91□□□□□ -0.66
MSH5-205ENST00000395853 PXDNQ92626 1479 aa10.9□□□□□ -0.66
MSH5-205ENST00000395853 SLFN14P0C7P3 912 aa10.9□□□□□ -0.66
MSH5-205ENST00000395853 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.9□□□□□ -0.66
MSH5-205ENST00000395853 STK26Q9P289 416 aa10.9□□□□□ -0.66
MSH5-205ENST00000395853 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
MSH5-205ENST00000395853 IFT172Q9UG01 1749 aa10.9□□□□□ -0.66
MSH5-205ENST00000395853 MYBBP1AQ9BQG0 1328 aaKnown RBP10.9□□□□□ -0.66
MSH5-205ENST00000395853 TTC36A6NLP5 189 aa10.9□□□□□ -0.66
MSH5-205ENST00000395853 OGFRQ9NZT2 677 aa10.9□□□□□ -0.66
MSH5-205ENST00000395853 NOP2P46087 812 aaKnown RBP10.89□□□□□ -0.67
MSH5-205ENST00000395853 ANAPC15P60006 121 aa10.89□□□□□ -0.67
MSH5-205ENST00000395853 KIAA1210Q9ULL0 1709 aa10.88□□□□□ -0.67
MSH5-205ENST00000395853 RSPH14Q9UHP6 348 aa10.88□□□□□ -0.67
MSH5-205ENST00000395853 PARD3Q8TEW0 1356 aa10.88□□□□□ -0.67
MSH5-205ENST00000395853 SLIT2O94813 1529 aa10.88□□□□□ -0.67
MSH5-205ENST00000395853 U2AF2P26368 475 aaKnown RBP eCLIP10.88□□□□□ -0.671e-7■■■■□ 19.5
MSH5-205ENST00000395853 LRP5O75197 1615 aa10.87□□□□□ -0.67
MSH5-205ENST00000395853 NBPF9Q3BBW0 867 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms