RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 BRINP3Q76B58 766 aa15.06■□□□□ 0
PHACTR3-205ENST00000395636 SKAP1Q86WV1 359 aa15.06■□□□□ 0
PHACTR3-205ENST00000395636 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
PHACTR3-205ENST00000395636 DLG5Q8TDM6 1919 aa15.05■□□□□ 0
PHACTR3-205ENST00000395636 EYA1Q99502 592 aa15.05■□□□□ 0
PHACTR3-205ENST00000395636 FAM83GA6ND36 823 aa15.05■□□□□ -0
PHACTR3-205ENST00000395636 GCP02774 474 aa15.05■□□□□ -0
PHACTR3-205ENST00000395636 CT47B1P0C2W7 299 aaPredicted RBP15.05■□□□□ -0
PHACTR3-205ENST00000395636 USHBP1Q8N6Y0 703 aa15.04■□□□□ -0
PHACTR3-205ENST00000395636 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
PHACTR3-205ENST00000395636 SLAIN2Q9P270 581 aa15.04■□□□□ -0
PHACTR3-205ENST00000395636 XRCC6P12956 609 aaKnown RBP eCLIP15.04■□□□□ -0
PHACTR3-205ENST00000395636 DCTN1Q14203 1278 aa15.04■□□□□ -0
PHACTR3-205ENST00000395636 PANK1Q8TE04 598 aa15.04■□□□□ -0
PHACTR3-205ENST00000395636 ALS2Q96Q42 1657 aa15.03■□□□□ -0
PHACTR3-205ENST00000395636 COG6Q9Y2V7 657 aa15.03■□□□□ -0
PHACTR3-205ENST00000395636 ZC3H6P61129 1189 aaKnown RBP15.03■□□□□ -0
PHACTR3-205ENST00000395636 MED1Q15648 1581 aaPredicted RBP15.02■□□□□ -0
PHACTR3-205ENST00000395636 NFE2L2Q16236 605 aa15.02■□□□□ -0
PHACTR3-205ENST00000395636 MAP7D2Q96T17 732 aa15.02■□□□□ -0
PHACTR3-205ENST00000395636 RGPD2P0DJD1 1756 aa15.02□□□□□ -0.01
PHACTR3-205ENST00000395636 FSD2A1L4K1 749 aa15.02□□□□□ -0.01
PHACTR3-205ENST00000395636 AXIN2Q9Y2T1 843 aa15.02□□□□□ -0.01
PHACTR3-205ENST00000395636 PXDNQ92626 1479 aa15.01□□□□□ -0.01
PHACTR3-205ENST00000395636 IL16Q14005 1332 aa15.01□□□□□ -0.01
PHACTR3-205ENST00000395636 LRRC59Q96AG4 307 aaKnown RBP15□□□□□ -0.01
PHACTR3-205ENST00000395636 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
PHACTR3-205ENST00000395636 RGPD5Q99666 1765 aa15□□□□□ -0.01
PHACTR3-205ENST00000395636 ESPNB1AK53 854 aa15□□□□□ -0.01
PHACTR3-205ENST00000395636 BECN1Q14457 450 aa15□□□□□ -0.01
PHACTR3-205ENST00000395636 ARHGEF25Q86VW2 580 aa15□□□□□ -0.01
PHACTR3-205ENST00000395636 USP19O94966 1318 aa15□□□□□ -0.01
PHACTR3-205ENST00000395636 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
PHACTR3-205ENST00000395636 IGHDP01880 384 aa14.99□□□□□ -0.01
PHACTR3-205ENST00000395636 IP6K1Q92551 441 aa14.99□□□□□ -0.01
PHACTR3-205ENST00000395636 SLIT3O75094 1523 aa14.99□□□□□ -0.01
PHACTR3-205ENST00000395636 RGS3P49796 1198 aa14.99□□□□□ -0.01
PHACTR3-205ENST00000395636 MRE11P49959 708 aa14.98□□□□□ -0.01
PHACTR3-205ENST00000395636 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
PHACTR3-205ENST00000395636 KCNH5Q8NCM2 988 aa14.98□□□□□ -0.01
PHACTR3-205ENST00000395636 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
PHACTR3-205ENST00000395636 BCL2L13Q9BXK5 485 aa14.98□□□□□ -0.01
PHACTR3-205ENST00000395636 C8orf34Q49A92 452 aa14.98□□□□□ -0.01
PHACTR3-205ENST00000395636 ARHGEF10O15013 1369 aa14.97□□□□□ -0.01
PHACTR3-205ENST00000395636 MTHFSDQ2M296 383 aaKnown RBP14.97□□□□□ -0.01
PHACTR3-205ENST00000395636 MCM10Q7L590 875 aa14.97□□□□□ -0.01
PHACTR3-205ENST00000395636 EXOSC9Q06265 439 aaKnown RBP14.97□□□□□ -0.01
PHACTR3-205ENST00000395636 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
PHACTR3-205ENST00000395636 ISY1Q9ULR0 285 aaKnown RBP14.97□□□□□ -0.01
PHACTR3-205ENST00000395636 SPATA31A3Q5VYP0 1347 aa14.97□□□□□ -0.01
PHACTR3-205ENST00000395636 KDRP35968 1356 aa14.96□□□□□ -0.01
PHACTR3-205ENST00000395636 TNS3Q68CZ2 1445 aa14.96□□□□□ -0.01
PHACTR3-205ENST00000395636 CHRNA2Q15822 529 aa14.96□□□□□ -0.01
PHACTR3-205ENST00000395636 RLBP1P12271 317 aa14.96□□□□□ -0.02
PHACTR3-205ENST00000395636 NCLP19338 710 aaKnown RBP14.95□□□□□ -0.02
PHACTR3-205ENST00000395636 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
PHACTR3-205ENST00000395636 KIF24Q5T7B8 1368 aa14.94□□□□□ -0.02
PHACTR3-205ENST00000395636 PHRF1Q9P1Y6 1649 aaKnown RBP14.94□□□□□ -0.02
PHACTR3-205ENST00000395636 FTSJ3Q8IY81 847 aaKnown RBP14.94□□□□□ -0.02
PHACTR3-205ENST00000395636 SMAP1Q8IYB5 467 aaPredicted RBP14.94□□□□□ -0.02
PHACTR3-205ENST00000395636 DZIP1LQ8IYY4 767 aaKnown RBP14.94□□□□□ -0.02
PHACTR3-205ENST00000395636 TNNQ9UQP3 1299 aa14.94□□□□□ -0.02
PHACTR3-205ENST00000395636 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
PHACTR3-205ENST00000395636 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
PHACTR3-205ENST00000395636 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
PHACTR3-205ENST00000395636 TERF1P54274 439 aa14.93□□□□□ -0.02
PHACTR3-205ENST00000395636 ANKRD24Q8TF21 1146 aa14.93□□□□□ -0.02
PHACTR3-205ENST00000395636 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
PHACTR3-205ENST00000395636 RWDD1Q9H446 243 aaPredicted RBP14.92□□□□□ -0.02
PHACTR3-205ENST00000395636 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
PHACTR3-205ENST00000395636 LTBP4Q8N2S1 1624 aa14.92□□□□□ -0.02
PHACTR3-205ENST00000395636 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
PHACTR3-205ENST00000395636 ELL2O00472 640 aaPredicted RBP14.92□□□□□ -0.02
PHACTR3-205ENST00000395636 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
PHACTR3-205ENST00000395636 PCDHB15Q9Y5E8 787 aa14.92□□□□□ -0.02
PHACTR3-205ENST00000395636 TSPYL6Q8N831 410 aa14.91□□□□□ -0.02
PHACTR3-205ENST00000395636 MBIPQ9NS73 344 aa14.91□□□□□ -0.02
PHACTR3-205ENST00000395636 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
PHACTR3-205ENST00000395636 SSH1Q8WYL5 1049 aa14.91□□□□□ -0.02
PHACTR3-205ENST00000395636 PANK2Q9BZ23 570 aa14.91□□□□□ -0.02
PHACTR3-205ENST00000395636 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
PHACTR3-205ENST00000395636 ZNF853P0CG23 659 aa14.9□□□□□ -0.02
PHACTR3-205ENST00000395636 MTERF4Q7Z6M4 381 aaKnown RBP14.9□□□□□ -0.02
PHACTR3-205ENST00000395636 COL18A1P39060 1754 aa14.89□□□□□ -0.03
PHACTR3-205ENST00000395636 ATF7IPQ6VMQ6 1270 aa14.89□□□□□ -0.03
PHACTR3-205ENST00000395636 KIF16BQ96L93 1317 aa14.89□□□□□ -0.03
PHACTR3-205ENST00000395636 IPO8O15397 1037 aaKnown RBP14.89□□□□□ -0.03
PHACTR3-205ENST00000395636 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
PHACTR3-205ENST00000395636 ERBB3P21860 1342 aa14.88□□□□□ -0.03
PHACTR3-205ENST00000395636 TRIM27P14373 513 aa14.88□□□□□ -0.03
PHACTR3-205ENST00000395636 ALDH1L2Q3SY69 923 aa14.88□□□□□ -0.03
PHACTR3-205ENST00000395636 KIAA1211Q6ZU35 1233 aa14.88□□□□□ -0.03
PHACTR3-205ENST00000395636 DDX19BQ9UMR2 479 aa14.88□□□□□ -0.03
PHACTR3-205ENST00000395636 VIRMAQ69YN4 1812 aaKnown RBP14.88□□□□□ -0.03
PHACTR3-205ENST00000395636 C8orf58Q8NAV2 365 aa14.88□□□□□ -0.03
PHACTR3-205ENST00000395636 NHSL1Q5SYE7 1610 aa14.87□□□□□ -0.03
PHACTR3-205ENST00000395636 CFAP44Q96MT7 982 aa14.87□□□□□ -0.03
PHACTR3-205ENST00000395636 ARXQ96QS3 562 aa14.87□□□□□ -0.03
PHACTR3-205ENST00000395636 IFT57Q9NWB7 429 aa14.87□□□□□ -0.03
PHACTR3-205ENST00000395636 ROBO1Q9Y6N7 1651 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms