RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 ACSBG1Q96GR2 724 aa19.01■□□□□ 0.63
SCAF11-203ENST00000395453 GOLGB1Q14789 3259 aaKnown RBP19.01■□□□□ 0.63
SCAF11-203ENST00000395453 CEP350Q5VT06 3117 aa19.01■□□□□ 0.63
SCAF11-203ENST00000395453 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
SCAF11-203ENST00000395453 USP47Q96K76 1375 aa19.01■□□□□ 0.63
SCAF11-203ENST00000395453 PAPPAQ13219 1627 aa18.99■□□□□ 0.63
SCAF11-203ENST00000395453 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
SCAF11-203ENST00000395453 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
SCAF11-203ENST00000395453 LTN1O94822 1766 aa18.98■□□□□ 0.63
SCAF11-203ENST00000395453 POLD1P28340 1107 aa18.98■□□□□ 0.63
SCAF11-203ENST00000395453 TMF1P82094 1093 aa18.98■□□□□ 0.63
SCAF11-203ENST00000395453 ZNF827Q17R98 1081 aa18.98■□□□□ 0.63
SCAF11-203ENST00000395453 ERBB3P21860 1342 aa18.97■□□□□ 0.63
SCAF11-203ENST00000395453 KLHL34Q8N239 644 aa18.97■□□□□ 0.63
SCAF11-203ENST00000395453 ANKRD36BQ8N2N9 1353 aa18.96■□□□□ 0.63
SCAF11-203ENST00000395453 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
SCAF11-203ENST00000395453 LRRC4BQ9NT99 713 aa18.96■□□□□ 0.63
SCAF11-203ENST00000395453 IL2RBP14784 551 aa18.95■□□□□ 0.62
SCAF11-203ENST00000395453 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
SCAF11-203ENST00000395453 NLRP2Q9NX02 1062 aa18.95■□□□□ 0.62
SCAF11-203ENST00000395453 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
SCAF11-203ENST00000395453 IP6K1Q92551 441 aa18.94■□□□□ 0.62
SCAF11-203ENST00000395453 AKT1S1Q96B36 256 aa18.94■□□□□ 0.62
SCAF11-203ENST00000395453 BTAF1O14981 1849 aa18.93■□□□□ 0.62
SCAF11-203ENST00000395453 SLC27A3Q5K4L6 730 aa18.93■□□□□ 0.62
SCAF11-203ENST00000395453 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
SCAF11-203ENST00000395453 ABCB7O75027 752 aa18.92■□□□□ 0.62
SCAF11-203ENST00000395453 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
SCAF11-203ENST00000395453 COG3Q96JB2 828 aa18.92■□□□□ 0.62
SCAF11-203ENST00000395453 FYB1O15117 783 aa18.9■□□□□ 0.62
SCAF11-203ENST00000395453 GRIN3BO60391 1043 aa18.9■□□□□ 0.62
SCAF11-203ENST00000395453 PNPLA7Q6ZV29 1317 aa18.89■□□□□ 0.61
SCAF11-203ENST00000395453 TFCP2L1Q9NZI6 479 aa18.89■□□□□ 0.61
SCAF11-203ENST00000395453 MAP3K19Q56UN5 1328 aa18.88■□□□□ 0.61
SCAF11-203ENST00000395453 FBLN1P23142 703 aa18.88■□□□□ 0.61
SCAF11-203ENST00000395453 NLGN2Q8NFZ4 835 aa18.88■□□□□ 0.61
SCAF11-203ENST00000395453 QSER1Q2KHR3 1735 aa18.88■□□□□ 0.61
SCAF11-203ENST00000395453 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
SCAF11-203ENST00000395453 COL24A1Q17RW2 1714 aa18.87■□□□□ 0.61
SCAF11-203ENST00000395453 HOXC9P31274 260 aa18.86■□□□□ 0.61
SCAF11-203ENST00000395453 GGNBP2Q9H3C7 697 aa18.85■□□□□ 0.61
SCAF11-203ENST00000395453 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
SCAF11-203ENST00000395453 AMPHP49418 695 aa18.84■□□□□ 0.61
SCAF11-203ENST00000395453 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
SCAF11-203ENST00000395453 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
SCAF11-203ENST00000395453 YBX3P16989 372 aaKnown RBP eCLIP18.83■□□□□ 0.61
SCAF11-203ENST00000395453 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
SCAF11-203ENST00000395453 LTV1Q96GA3 475 aaPredicted RBP18.82■□□□□ 0.6
SCAF11-203ENST00000395453 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
SCAF11-203ENST00000395453 KCNQ4P56696 695 aa18.81■□□□□ 0.6
SCAF11-203ENST00000395453 RRS1Q15050 365 aaKnown RBP18.81■□□□□ 0.6
SCAF11-203ENST00000395453 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
SCAF11-203ENST00000395453 KIF20BQ96Q89 1820 aa18.8■□□□□ 0.6
SCAF11-203ENST00000395453 ATP10DQ9P241 1426 aa18.8■□□□□ 0.6
SCAF11-203ENST00000395453 RGPD2P0DJD1 1756 aa18.79■□□□□ 0.6
SCAF11-203ENST00000395453 CCER1Q8TC90 406 aaPredicted RBP18.78■□□□□ 0.6
SCAF11-203ENST00000395453 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
SCAF11-203ENST00000395453 TUBGCP6Q96RT7 1819 aa18.78■□□□□ 0.6
SCAF11-203ENST00000395453 CCNL1Q9UK58 526 aaPredicted RBP18.77■□□□□ 0.6
SCAF11-203ENST00000395453 KIF24Q5T7B8 1368 aa18.77■□□□□ 0.6
SCAF11-203ENST00000395453 NSD3Q9BZ95 1437 aa18.77■□□□□ 0.6
SCAF11-203ENST00000395453 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
SCAF11-203ENST00000395453 COL23A1Q86Y22 540 aaPredicted RBP18.76■□□□□ 0.59
SCAF11-203ENST00000395453 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
SCAF11-203ENST00000395453 INSRP06213 1382 aa18.76■□□□□ 0.59
SCAF11-203ENST00000395453 HSPA6P17066 643 aa18.75■□□□□ 0.59
SCAF11-203ENST00000395453 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.591e-13■■■■■ 57.3
SCAF11-203ENST00000395453 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
SCAF11-203ENST00000395453 CD2APQ9Y5K6 639 aa18.74■□□□□ 0.59
SCAF11-203ENST00000395453 LY75O60449 1722 aa18.74■□□□□ 0.59
SCAF11-203ENST00000395453 NSD2O96028 1365 aa18.74■□□□□ 0.59
SCAF11-203ENST00000395453 FLT4P35916 1363 aa18.74■□□□□ 0.59
SCAF11-203ENST00000395453 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
SCAF11-203ENST00000395453 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
SCAF11-203ENST00000395453 ZCRB1Q8TBF4 217 aaKnown RBP18.74■□□□□ 0.59
SCAF11-203ENST00000395453 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
SCAF11-203ENST00000395453 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
SCAF11-203ENST00000395453 MEGF6O75095 1541 aa18.72■□□□□ 0.59
SCAF11-203ENST00000395453 DOT1LQ8TEK3 1739 aa18.71■□□□□ 0.59
SCAF11-203ENST00000395453 ADCY9O60503 1353 aa18.71■□□□□ 0.59
SCAF11-203ENST00000395453 SMG6Q86US8 1419 aaKnown RBP18.71■□□□□ 0.59
SCAF11-203ENST00000395453 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
SCAF11-203ENST00000395453 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
SCAF11-203ENST00000395453 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
SCAF11-203ENST00000395453 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
SCAF11-203ENST00000395453 ZNF526Q8TF50 670 aaPredicted RBP18.7■□□□□ 0.58
SCAF11-203ENST00000395453 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
SCAF11-203ENST00000395453 ANKRD26Q9UPS8 1709 aa18.68■□□□□ 0.58
SCAF11-203ENST00000395453 WASHC2AQ641Q2 1341 aa18.68■□□□□ 0.58
SCAF11-203ENST00000395453 MAP2P11137 1827 aaKnown RBP18.68■□□□□ 0.58
SCAF11-203ENST00000395453 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
SCAF11-203ENST00000395453 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
SCAF11-203ENST00000395453 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
SCAF11-203ENST00000395453 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
SCAF11-203ENST00000395453 PANK3Q9H999 370 aa18.65■□□□□ 0.58
SCAF11-203ENST00000395453 RBM42Q9BTD8 480 aaKnown RBP18.64■□□□□ 0.57
SCAF11-203ENST00000395453 PPM1GO15355 546 aaPredicted RBP18.63■□□□□ 0.57
SCAF11-203ENST00000395453 IGSF1Q8N6C5 1336 aa18.62■□□□□ 0.57
SCAF11-203ENST00000395453 C5P01031 1676 aa18.62■□□□□ 0.57
SCAF11-203ENST00000395453 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms