RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 NUTM2BA6NNL0 878 aaPredicted RBP17.07■□□□□ 0.32
VPS26A-203ENST00000395098 GNAT3A8MTJ3 354 aa17.07■□□□□ 0.32
VPS26A-203ENST00000395098 NUTM2EB1AL46 878 aaPredicted RBP17.07■□□□□ 0.32
VPS26A-203ENST00000395098 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
VPS26A-203ENST00000395098 NUTM2AQ8IVF1 878 aaPredicted RBP17.07■□□□□ 0.32
VPS26A-203ENST00000395098 IFT57Q9NWB7 429 aa17.07■□□□□ 0.32
VPS26A-203ENST00000395098 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
VPS26A-203ENST00000395098 CRB1P82279 1406 aa17.07■□□□□ 0.32
VPS26A-203ENST00000395098 CALD1Q05682 793 aaKnown RBP17.06■□□□□ 0.32
VPS26A-203ENST00000395098 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
VPS26A-203ENST00000395098 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-203ENST00000395098 RTF1Q92541 710 aaKnown RBP17.06■□□□□ 0.32
VPS26A-203ENST00000395098 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
VPS26A-203ENST00000395098 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
VPS26A-203ENST00000395098 MBIPQ9NS73 344 aa17.06■□□□□ 0.32
VPS26A-203ENST00000395098 NEFLP07196 543 aa17.05■□□□□ 0.32
VPS26A-203ENST00000395098 EVA1CP58658 441 aa17.05■□□□□ 0.32
VPS26A-203ENST00000395098 AMOTQ4VCS5 1084 aa17.05■□□□□ 0.32
VPS26A-203ENST00000395098 ZNF530Q6P9A1 599 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-203ENST00000395098 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
VPS26A-203ENST00000395098 GNAI1P63096 354 aa17.05■□□□□ 0.32
VPS26A-203ENST00000395098 COL14A1Q05707 1796 aaKnown RBP17.04■□□□□ 0.32
VPS26A-203ENST00000395098 HTATSF1O43719 755 aaKnown RBP17.04■□□□□ 0.32
VPS26A-203ENST00000395098 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
VPS26A-203ENST00000395098 PLIN1O60240 522 aa17.03■□□□□ 0.32
VPS26A-203ENST00000395098 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-203ENST00000395098 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
VPS26A-203ENST00000395098 JCADQ9P266 1359 aa17.03■□□□□ 0.32
VPS26A-203ENST00000395098 BCAR3O75815 825 aa17.03■□□□□ 0.32
VPS26A-203ENST00000395098 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
VPS26A-203ENST00000395098 HSPA1LP34931 641 aa17.02■□□□□ 0.32
VPS26A-203ENST00000395098 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
VPS26A-203ENST00000395098 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
VPS26A-203ENST00000395098 CHL1O00533 1208 aa17.02■□□□□ 0.31
VPS26A-203ENST00000395098 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
VPS26A-203ENST00000395098 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
VPS26A-203ENST00000395098 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
VPS26A-203ENST00000395098 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
VPS26A-203ENST00000395098 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
VPS26A-203ENST00000395098 TSPYL6Q8N831 410 aa17■□□□□ 0.31
VPS26A-203ENST00000395098 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
VPS26A-203ENST00000395098 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
VPS26A-203ENST00000395098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.31
VPS26A-203ENST00000395098 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
VPS26A-203ENST00000395098 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
VPS26A-203ENST00000395098 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
VPS26A-203ENST00000395098 SPG7Q9UQ90 795 aa16.98■□□□□ 0.31
VPS26A-203ENST00000395098 PLCH1Q4KWH8 1693 aa16.98■□□□□ 0.31
VPS26A-203ENST00000395098 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-203ENST00000395098 CYP27B1O15528 508 aa16.98■□□□□ 0.31
VPS26A-203ENST00000395098 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
VPS26A-203ENST00000395098 IL2RBP14784 551 aa16.97■□□□□ 0.31
VPS26A-203ENST00000395098 PHKG2P15735 406 aa16.97■□□□□ 0.31
VPS26A-203ENST00000395098 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
VPS26A-203ENST00000395098 CT47B1P0C2W7 299 aaPredicted RBP16.96■□□□□ 0.31
VPS26A-203ENST00000395098 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
VPS26A-203ENST00000395098 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
VPS26A-203ENST00000395098 LRP6O75581 1613 aa16.96■□□□□ 0.31
VPS26A-203ENST00000395098 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
VPS26A-203ENST00000395098 VAMP4O75379 141 aa16.96■□□□□ 0.31
VPS26A-203ENST00000395098 SLIT2O94813 1529 aa16.96■□□□□ 0.3
VPS26A-203ENST00000395098 TAF7Q15545 349 aaPredicted RBP16.95■□□□□ 0.3
VPS26A-203ENST00000395098 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
VPS26A-203ENST00000395098 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
VPS26A-203ENST00000395098 NRAPQ86VF7 1730 aa16.95■□□□□ 0.3
VPS26A-203ENST00000395098 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
VPS26A-203ENST00000395098 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
VPS26A-203ENST00000395098 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
VPS26A-203ENST00000395098 SPATA31A6Q5VVP1 1343 aa16.94■□□□□ 0.3
VPS26A-203ENST00000395098 PARP4Q9UKK3 1724 aaKnown RBP16.94■□□□□ 0.3
VPS26A-203ENST00000395098 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
VPS26A-203ENST00000395098 ADAMTS7Q9UKP4 1686 aa16.93■□□□□ 0.3
VPS26A-203ENST00000395098 TEFQ10587 303 aa16.92■□□□□ 0.3
VPS26A-203ENST00000395098 DISP2A7MBM2 1401 aa16.92■□□□□ 0.3
VPS26A-203ENST00000395098 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
VPS26A-203ENST00000395098 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
VPS26A-203ENST00000395098 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
VPS26A-203ENST00000395098 SPATA31A1Q5TZJ5 1347 aa16.91■□□□□ 0.3
VPS26A-203ENST00000395098 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
VPS26A-203ENST00000395098 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
VPS26A-203ENST00000395098 TCERG1O14776 1098 aaKnown RBP16.91■□□□□ 0.3
VPS26A-203ENST00000395098 KCNQ3O43525 872 aa16.91■□□□□ 0.3
VPS26A-203ENST00000395098 DDX54Q8TDD1 881 aaKnown RBP16.9■□□□□ 0.3
VPS26A-203ENST00000395098 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
VPS26A-203ENST00000395098 TNNQ9UQP3 1299 aa16.9■□□□□ 0.3
VPS26A-203ENST00000395098 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
VPS26A-203ENST00000395098 EXOC6Q8TAG9 804 aa16.9■□□□□ 0.3
VPS26A-203ENST00000395098 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
VPS26A-203ENST00000395098 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
VPS26A-203ENST00000395098 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
VPS26A-203ENST00000395098 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.3
VPS26A-203ENST00000395098 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
VPS26A-203ENST00000395098 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
VPS26A-203ENST00000395098 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
VPS26A-203ENST00000395098 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
VPS26A-203ENST00000395098 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
VPS26A-203ENST00000395098 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
VPS26A-203ENST00000395098 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
VPS26A-203ENST00000395098 CRBNQ96SW2 442 aa16.88■□□□□ 0.29
VPS26A-203ENST00000395098 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms