RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
HOXC6-202ENST00000394331 SETD1AO15047 1707 aaKnown RBP23.1■■□□□ 1.29
HOXC6-202ENST00000394331 CD2BP2O95400 341 aaKnown RBP23.1■■□□□ 1.29
HOXC6-202ENST00000394331 MLECQ14165 292 aa23.1■■□□□ 1.29
HOXC6-202ENST00000394331 SIRT1Q96EB6 747 aa23.1■■□□□ 1.29
HOXC6-202ENST00000394331 BRPF1P55201 1214 aaPredicted RBP23.1■■□□□ 1.29
HOXC6-202ENST00000394331 TMEM57Q8N5G2 664 aa23.1■■□□□ 1.29
HOXC6-202ENST00000394331 ARID3AQ99856 593 aa23.1■■□□□ 1.29
HOXC6-202ENST00000394331 PPIP5K1Q6PFW1 1433 aa23.1■■□□□ 1.29
HOXC6-202ENST00000394331 NUCB1Q02818 461 aa23.09■■□□□ 1.29
HOXC6-202ENST00000394331 ZBTB40Q9NUA8 1239 aa23.09■■□□□ 1.29
HOXC6-202ENST00000394331 RIMBP3CA6NJZ7 1639 aa23.09■■□□□ 1.29
HOXC6-202ENST00000394331 RIMBP3BA6NNM3 1639 aa23.09■■□□□ 1.29
HOXC6-202ENST00000394331 RIMBP3Q9UFD9 1639 aa23.09■■□□□ 1.29
HOXC6-202ENST00000394331 AATKQ6ZMQ8 1374 aa23.08■■□□□ 1.29
HOXC6-202ENST00000394331 ESF1Q9H501 851 aaKnown RBP23.08■■□□□ 1.29
HOXC6-202ENST00000394331 TSPOAP1O95153 1857 aa23.07■■□□□ 1.28
HOXC6-202ENST00000394331 FBLN1P23142 703 aa23.07■■□□□ 1.28
HOXC6-202ENST00000394331 MCTP1Q6DN14 999 aa23.07■■□□□ 1.28
HOXC6-202ENST00000394331 TMEM51Q9NW97 253 aa23.07■■□□□ 1.28
HOXC6-202ENST00000394331 IPO4Q8TEX9 1081 aaKnown RBP23.06■■□□□ 1.28
HOXC6-202ENST00000394331 METP08581 1390 aa23.06■■□□□ 1.28
HOXC6-202ENST00000394331 IL13P35225 146 aa23.06■■□□□ 1.28
HOXC6-202ENST00000394331 NAP1L2Q9ULW6 460 aaPredicted RBP23.06■■□□□ 1.28
HOXC6-202ENST00000394331 CCDC61Q9Y6R9 512 aa23.06■■□□□ 1.28
HOXC6-202ENST00000394331 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
HOXC6-202ENST00000394331 NUDT16Q96DE0 195 aaKnown RBP23.05■■□□□ 1.28
HOXC6-202ENST00000394331 CHMP4BQ9H444 224 aaKnown RBP23.05■■□□□ 1.28
HOXC6-202ENST00000394331 EMILIN1Q9Y6C2 1016 aa23.05■■□□□ 1.28
HOXC6-202ENST00000394331 HMOX1P09601 288 aa23.05■■□□□ 1.28
HOXC6-202ENST00000394331 PDIA4P13667 645 aaKnown RBP23.05■■□□□ 1.28
HOXC6-202ENST00000394331 GNAI1P63096 354 aa23.05■■□□□ 1.28
HOXC6-202ENST00000394331 NME9Q86XW9 330 aa23.05■■□□□ 1.28
HOXC6-202ENST00000394331 PHACTR3Q96KR7 559 aa23.05■■□□□ 1.28
HOXC6-202ENST00000394331 CBX1P83916 185 aa23.04■■□□□ 1.28
HOXC6-202ENST00000394331 TXNDC2Q86VQ3 553 aa23.04■■□□□ 1.28
HOXC6-202ENST00000394331 COG3Q96JB2 828 aa23.04■■□□□ 1.28
HOXC6-202ENST00000394331 CWC22Q9HCG8 908 aaKnown RBP23.04■■□□□ 1.28
HOXC6-202ENST00000394331 PIBF1Q8WXW3 757 aa23.04■■□□□ 1.28
HOXC6-202ENST00000394331 IFT57Q9NWB7 429 aa23.04■■□□□ 1.28
HOXC6-202ENST00000394331 LMOD3Q0VAK6 560 aa23.03■■□□□ 1.28
HOXC6-202ENST00000394331 NRXN3Q9Y4C0 1643 aa23.03■■□□□ 1.28
HOXC6-202ENST00000394331 TECPR2O15040 1411 aa23.03■■□□□ 1.28
HOXC6-202ENST00000394331 ATP2B3Q16720 1220 aa23.03■■□□□ 1.28
HOXC6-202ENST00000394331 ARHGAP45Q92619 1136 aa23.03■■□□□ 1.28
HOXC6-202ENST00000394331 FOXD4L1Q9NU39 408 aa23.02■■□□□ 1.28
HOXC6-202ENST00000394331 KIF3AQ9Y496 699 aa23.02■■□□□ 1.28
HOXC6-202ENST00000394331 GPT2Q8TD30 523 aa23.01■■□□□ 1.27
HOXC6-202ENST00000394331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.01■■□□□ 1.27
HOXC6-202ENST00000394331 VAMP4O75379 141 aa23.01■■□□□ 1.27
HOXC6-202ENST00000394331 BCL11BQ9C0K0 894 aaPredicted RBP23.01■■□□□ 1.27
HOXC6-202ENST00000394331 AK9Q5TCS8 1911 aa23■■□□□ 1.27
HOXC6-202ENST00000394331 RABEP1Q15276 862 aa23■■□□□ 1.27
HOXC6-202ENST00000394331 MAP2P11137 1827 aaKnown RBP23■■□□□ 1.27
HOXC6-202ENST00000394331 MBD3O95983 291 aa22.99■■□□□ 1.27
HOXC6-202ENST00000394331 ZNF853P0CG23 659 aa22.99■■□□□ 1.27
HOXC6-202ENST00000394331 CHD1LQ86WJ1 897 aa22.99■■□□□ 1.27
HOXC6-202ENST00000394331 SPTLC3Q9NUV7 552 aa22.99■■□□□ 1.27
HOXC6-202ENST00000394331 MRPL50Q8N5N7 158 aaKnown RBP22.98■■□□□ 1.27
HOXC6-202ENST00000394331 CFAP44Q96MT7 982 aa22.98■■□□□ 1.27
HOXC6-202ENST00000394331 FEZ1Q99689 392 aa22.98■■□□□ 1.27
HOXC6-202ENST00000394331 ZRANB1Q9UGI0 708 aa22.97■■□□□ 1.27
HOXC6-202ENST00000394331 KNDC1Q76NI1 1749 aa22.97■■□□□ 1.27
HOXC6-202ENST00000394331 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
HOXC6-202ENST00000394331 FKBP5Q13451 457 aaPredicted RBP22.96■■□□□ 1.27
HOXC6-202ENST00000394331 DNTTIP2Q5QJE6 756 aaKnown RBP22.96■■□□□ 1.27
HOXC6-202ENST00000394331 TMEM63CQ9P1W3 806 aa22.96■■□□□ 1.27
HOXC6-202ENST00000394331 TNRQ92752 1358 aa22.96■■□□□ 1.27
HOXC6-202ENST00000394331 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
HOXC6-202ENST00000394331 NOLC1Q14978 699 aaKnown RBP eCLIP22.95■■□□□ 1.27
HOXC6-202ENST00000394331 MBIPQ9NS73 344 aa22.95■■□□□ 1.27
HOXC6-202ENST00000394331 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
HOXC6-202ENST00000394331 PTMAP06454 111 aaKnown RBP22.95■■□□□ 1.26
HOXC6-202ENST00000394331 TBC1D9Q6ZT07 1266 aa22.95■■□□□ 1.26
HOXC6-202ENST00000394331 ANKRD7Q92527 254 aa22.95■■□□□ 1.26
HOXC6-202ENST00000394331 CPS1P31327 1500 aa22.95■■□□□ 1.26
HOXC6-202ENST00000394331 PDCL2Q8N4E4 241 aa22.95■■□□□ 1.26
HOXC6-202ENST00000394331 ZBTB7BO15156 539 aaPredicted RBP22.94■■□□□ 1.26
HOXC6-202ENST00000394331 RBM42Q9BTD8 480 aaKnown RBP22.94■■□□□ 1.26
HOXC6-202ENST00000394331 SYCE3A1L190 88 aa22.93■■□□□ 1.26
HOXC6-202ENST00000394331 PRPF40AO75400 957 aaKnown RBP22.93■■□□□ 1.26
HOXC6-202ENST00000394331 RRS1Q15050 365 aaKnown RBP22.93■■□□□ 1.26
HOXC6-202ENST00000394331 UVSSAQ2YD98 709 aa22.93■■□□□ 1.26
HOXC6-202ENST00000394331 BCL2L12Q9HB09 334 aa22.93■■□□□ 1.26
HOXC6-202ENST00000394331 TMEM2Q9UHN6 1383 aa22.93■■□□□ 1.26
HOXC6-202ENST00000394331 MON2Q7Z3U7 1717 aa22.93■■□□□ 1.26
HOXC6-202ENST00000394331 TSPYL6Q8N831 410 aa22.93■■□□□ 1.26
HOXC6-202ENST00000394331 NCKAP5LQ9HCH0 1330 aa22.93■■□□□ 1.26
HOXC6-202ENST00000394331 TWISTNBQ3B726 338 aaPredicted RBP22.92■■□□□ 1.26
HOXC6-202ENST00000394331 GCC1Q96CN9 775 aa22.92■■□□□ 1.26
HOXC6-202ENST00000394331 RBM27Q9P2N5 1060 aaKnown RBP22.92■■□□□ 1.26
HOXC6-202ENST00000394331 GABPB1Q06547 395 aaPredicted RBP22.92■■□□□ 1.26
HOXC6-202ENST00000394331 FAM184AQ8NB25 1140 aa22.92■■□□□ 1.26
HOXC6-202ENST00000394331 LNPKQ9C0E8 428 aa22.91■■□□□ 1.26
HOXC6-202ENST00000394331 TSPY26PQ9H489 355 aa22.91■■□□□ 1.26
HOXC6-202ENST00000394331 SLC20A2Q08357 652 aa22.9■■□□□ 1.26
HOXC6-202ENST00000394331 API5Q9BZZ5 524 aaKnown RBP22.9■■□□□ 1.26
HOXC6-202ENST00000394331 PRR36Q9H6K5 1346 aa22.9■■□□□ 1.26
HOXC6-202ENST00000394331 ABCC4O15439 1325 aa22.9■■□□□ 1.26
HOXC6-202ENST00000394331 TAF7LQ5H9L4 462 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms