RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 NFAT5O94916 1531 aa15.63■□□□□ 0.09
VTI1BP2-201ENST00000394154 SOX12O15370 315 aa15.62■□□□□ 0.09
VTI1BP2-201ENST00000394154 KCNQ4P56696 695 aa15.62■□□□□ 0.09
VTI1BP2-201ENST00000394154 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
VTI1BP2-201ENST00000394154 NLRP2Q9NX02 1062 aa15.61■□□□□ 0.09
VTI1BP2-201ENST00000394154 CABP1Q9NZU7 370 aa15.61■□□□□ 0.09
VTI1BP2-201ENST00000394154 CICQ96RK0 1608 aaPredicted RBP15.61■□□□□ 0.09
VTI1BP2-201ENST00000394154 ERBB3P21860 1342 aa15.6■□□□□ 0.09
VTI1BP2-201ENST00000394154 IGSF1Q8N6C5 1336 aa15.6■□□□□ 0.09
VTI1BP2-201ENST00000394154 KIAA1210Q9ULL0 1709 aa15.58■□□□□ 0.08
VTI1BP2-201ENST00000394154 CCNL1Q9UK58 526 aaPredicted RBP15.58■□□□□ 0.08
VTI1BP2-201ENST00000394154 DOT1LQ8TEK3 1739 aa15.57■□□□□ 0.08
VTI1BP2-201ENST00000394154 RBM46Q8TBY0 533 aaKnown RBP15.57■□□□□ 0.08
VTI1BP2-201ENST00000394154 SYTL4Q96C24 671 aaPredicted RBP15.57■□□□□ 0.08
VTI1BP2-201ENST00000394154 TTC21BQ7Z4L5 1316 aa15.57■□□□□ 0.08
VTI1BP2-201ENST00000394154 TTC21AQ8NDW8 1320 aa15.57■□□□□ 0.08
VTI1BP2-201ENST00000394154 ANKRD36BQ8N2N9 1353 aa15.57■□□□□ 0.08
VTI1BP2-201ENST00000394154 PCNTO95613 3336 aa15.56■□□□□ 0.08
VTI1BP2-201ENST00000394154 FLAD1Q8NFF5 587 aa15.56■□□□□ 0.08
VTI1BP2-201ENST00000394154 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
VTI1BP2-201ENST00000394154 WWC3Q9ULE0 1092 aa15.56■□□□□ 0.08
VTI1BP2-201ENST00000394154 NSD2O96028 1365 aa15.55■□□□□ 0.08
VTI1BP2-201ENST00000394154 CENPJQ9HC77 1338 aaPredicted RBP15.55■□□□□ 0.08
VTI1BP2-201ENST00000394154 PRIM1P49642 420 aaKnown RBP15.55■□□□□ 0.08
VTI1BP2-201ENST00000394154 HTRA3P83110 453 aa15.55■□□□□ 0.08
VTI1BP2-201ENST00000394154 DDX54Q8TDD1 881 aaKnown RBP15.55■□□□□ 0.08
VTI1BP2-201ENST00000394154 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
VTI1BP2-201ENST00000394154 C5P01031 1676 aa15.54■□□□□ 0.08
VTI1BP2-201ENST00000394154 HMGB2P26583 209 aaKnown RBP15.54■□□□□ 0.08
VTI1BP2-201ENST00000394154 FSTL1Q12841 308 aa15.54■□□□□ 0.08
VTI1BP2-201ENST00000394154 C16orf71Q8IYS4 520 aaPredicted RBP15.54■□□□□ 0.08
VTI1BP2-201ENST00000394154 NMRK2Q9NPI5 230 aa15.53■□□□□ 0.08
VTI1BP2-201ENST00000394154 LTN1O94822 1766 aa15.52■□□□□ 0.08
VTI1BP2-201ENST00000394154 USP47Q96K76 1375 aa15.52■□□□□ 0.08
VTI1BP2-201ENST00000394154 ANKRD24Q8TF21 1146 aa15.52■□□□□ 0.08
VTI1BP2-201ENST00000394154 USP54Q70EL1 1684 aa15.51■□□□□ 0.07
VTI1BP2-201ENST00000394154 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
VTI1BP2-201ENST00000394154 PCDH10Q9P2E7 1040 aa15.5■□□□□ 0.07
VTI1BP2-201ENST00000394154 FAM208AQ9UK61 1670 aaKnown RBP15.5■□□□□ 0.07
VTI1BP2-201ENST00000394154 TAF1LQ8IZX4 1826 aa15.48■□□□□ 0.07
VTI1BP2-201ENST00000394154 HSPA1AP0DMV8 641 aaKnown RBP15.48■□□□□ 0.07
VTI1BP2-201ENST00000394154 HSPA1BP0DMV9 641 aaKnown RBP15.48■□□□□ 0.07
VTI1BP2-201ENST00000394154 EVC2Q86UK5 1308 aa15.47■□□□□ 0.07
VTI1BP2-201ENST00000394154 USP31Q70CQ4 1352 aa15.47■□□□□ 0.07
VTI1BP2-201ENST00000394154 PLEKHG2Q9H7P9 1386 aa15.47■□□□□ 0.07
VTI1BP2-201ENST00000394154 NBPF1Q3BBV0 1214 aa15.46■□□□□ 0.07
VTI1BP2-201ENST00000394154 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
VTI1BP2-201ENST00000394154 C10orf71Q711Q0 1435 aa15.45■□□□□ 0.06
VTI1BP2-201ENST00000394154 NSD3Q9BZ95 1437 aa15.45■□□□□ 0.06
VTI1BP2-201ENST00000394154 C4BP0C0L5 1744 aa15.45■□□□□ 0.06
VTI1BP2-201ENST00000394154 MON2Q7Z3U7 1717 aa15.45■□□□□ 0.06
VTI1BP2-201ENST00000394154 TOGARAM1Q9Y4F4 1720 aa15.44■□□□□ 0.06
VTI1BP2-201ENST00000394154 PXDNLA1KZ92 1463 aa15.44■□□□□ 0.06
VTI1BP2-201ENST00000394154 KDM2BQ8NHM5 1336 aa15.43■□□□□ 0.06
VTI1BP2-201ENST00000394154 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
VTI1BP2-201ENST00000394154 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
VTI1BP2-201ENST00000394154 ARHGAP27Q6ZUM4 889 aa15.43■□□□□ 0.06
VTI1BP2-201ENST00000394154 ZCRB1Q8TBF4 217 aaKnown RBP15.43■□□□□ 0.06
VTI1BP2-201ENST00000394154 AK7Q96M32 723 aa15.43■□□□□ 0.06
VTI1BP2-201ENST00000394154 UBR3Q6ZT12 1888 aa15.43■□□□□ 0.06
VTI1BP2-201ENST00000394154 TNRC6CQ9HCJ0 1690 aaKnown RBP15.42■□□□□ 0.06
VTI1BP2-201ENST00000394154 SMC1BQ8NDV3 1235 aa15.42■□□□□ 0.06
VTI1BP2-201ENST00000394154 BCS1LQ9Y276 419 aa15.42■□□□□ 0.06
VTI1BP2-201ENST00000394154 PKD1L3Q7Z443 1732 aa15.42■□□□□ 0.06
VTI1BP2-201ENST00000394154 KIAA1551Q9HCM1 1747 aa15.42■□□□□ 0.06
VTI1BP2-201ENST00000394154 PALLDQ8WX93 1383 aa15.41■□□□□ 0.06
VTI1BP2-201ENST00000394154 N4BP2Q86UW6 1770 aaPredicted RBP15.41■□□□□ 0.06
VTI1BP2-201ENST00000394154 KCPQ6ZWJ8 1503 aa15.4■□□□□ 0.06
VTI1BP2-201ENST00000394154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.4■□□□□ 0.06
VTI1BP2-201ENST00000394154 PHF14O94880 888 aa15.4■□□□□ 0.06
VTI1BP2-201ENST00000394154 TGFB2P61812 414 aa15.4■□□□□ 0.06
VTI1BP2-201ENST00000394154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
VTI1BP2-201ENST00000394154 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
VTI1BP2-201ENST00000394154 AMIGO3Q86WK7 504 aa15.39■□□□□ 0.05
VTI1BP2-201ENST00000394154 IP6K1Q92551 441 aa15.39■□□□□ 0.05
VTI1BP2-201ENST00000394154 SSFA2P28290 1259 aa15.38■□□□□ 0.05
VTI1BP2-201ENST00000394154 NME9Q86XW9 330 aa15.38■□□□□ 0.05
VTI1BP2-201ENST00000394154 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
VTI1BP2-201ENST00000394154 MEGF6O75095 1541 aa15.38■□□□□ 0.05
VTI1BP2-201ENST00000394154 RRAGCQ9HB90 399 aa15.37■□□□□ 0.05
VTI1BP2-201ENST00000394154 BRCA1P38398 1863 aaKnown RBP15.36■□□□□ 0.05
VTI1BP2-201ENST00000394154 FCHSD2O94868 740 aa15.36■□□□□ 0.05
VTI1BP2-201ENST00000394154 ARFGEF1Q9Y6D6 1849 aa15.36■□□□□ 0.05
VTI1BP2-201ENST00000394154 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
VTI1BP2-201ENST00000394154 MMP10P09238 476 aa15.35■□□□□ 0.05
VTI1BP2-201ENST00000394154 SMARCC1Q92922 1105 aaPredicted RBP15.35■□□□□ 0.05
VTI1BP2-201ENST00000394154 CGNL1Q0VF96 1302 aa15.35■□□□□ 0.05
VTI1BP2-201ENST00000394154 SBNO2Q9Y2G9 1366 aa15.35■□□□□ 0.05
VTI1BP2-201ENST00000394154 SMIM5Q71RC9 77 aa15.34■□□□□ 0.05
VTI1BP2-201ENST00000394154 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
VTI1BP2-201ENST00000394154 EIF4G2P78344 907 aaKnown RBP eCLIP15.33■□□□□ 0.04
VTI1BP2-201ENST00000394154 MPRIPQ6WCQ1 1025 aa15.32■□□□□ 0.04
VTI1BP2-201ENST00000394154 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
VTI1BP2-201ENST00000394154 DPEP1P16444 411 aa15.31■□□□□ 0.04
VTI1BP2-201ENST00000394154 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
VTI1BP2-201ENST00000394154 ITGB4P16144 1822 aa15.3■□□□□ 0.04
VTI1BP2-201ENST00000394154 CARD11Q9BXL7 1154 aa15.3■□□□□ 0.04
VTI1BP2-201ENST00000394154 PCDH11XQ9BZA7 1347 aa15.3■□□□□ 0.04
VTI1BP2-201ENST00000394154 PCDH11YQ9BZA8 1340 aa15.3■□□□□ 0.04
VTI1BP2-201ENST00000394154 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms