RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
NKIRAS2-203ENST00000393879 DDX58O95786 925 aaKnown RBP12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 AGLP35573 1532 aa12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 SURF6O75683 361 aaKnown RBP12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 TAF7Q15545 349 aaPredicted RBP12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 NEXNQ0ZGT2 675 aa12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 PHF23Q9BUL5 403 aaPredicted RBP12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
NKIRAS2-203ENST00000393879 FLT4P35916 1363 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 ADGRB1O14514 1584 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 SRCIN1Q9C0H9 1055 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 FGD1P98174 961 aa12.12□□□□□ -0.47
NKIRAS2-203ENST00000393879 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 RABEP1Q15276 862 aa12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 ZBTB7BO15156 539 aaPredicted RBP12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 EXOC6BQ9Y2D4 811 aa12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 FOXO3O43524 673 aa12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 KCNA6P17658 529 aa12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
NKIRAS2-203ENST00000393879 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 FLIIQ13045 1269 aa12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 EYA1Q99502 592 aa12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 DIAPH3Q9NSV4 1193 aa12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
NKIRAS2-203ENST00000393879 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 K7ELQ4 463 aaPredicted RBP12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 USP32Q8NFA0 1604 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 ERC2O15083 957 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 NUCB2P80303 420 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 MEIS3Q99687 375 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 PREX1Q8TCU6 1659 aa12.09□□□□□ -0.47
NKIRAS2-203ENST00000393879 TRAK2O60296 914 aa12.08□□□□□ -0.48
NKIRAS2-203ENST00000393879 ANKRD44Q8N8A2 993 aa12.08□□□□□ -0.48
NKIRAS2-203ENST00000393879 PTPRMP28827 1452 aa12.08□□□□□ -0.48
NKIRAS2-203ENST00000393879 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
NKIRAS2-203ENST00000393879 RUFY2Q8WXA3 655 aa12.08□□□□□ -0.48
NKIRAS2-203ENST00000393879 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
NKIRAS2-203ENST00000393879 PRR36Q9H6K5 1346 aa12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 CHL1O00533 1208 aa12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 MCM4P33991 863 aa12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 ZC3H6P61129 1189 aaKnown RBP12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 GLIPR1L2Q4G1C9 344 aa12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 SRGAP3O43295 1099 aa12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 NEK4P51957 841 aa12.07□□□□□ -0.48
NKIRAS2-203ENST00000393879 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
NKIRAS2-203ENST00000393879 TATP17735 454 aaPredicted RBP12.06□□□□□ -0.48
NKIRAS2-203ENST00000393879 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
NKIRAS2-203ENST00000393879 PLEKHG1Q9ULL1 1385 aa12.06□□□□□ -0.48
NKIRAS2-203ENST00000393879 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
NKIRAS2-203ENST00000393879 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
NKIRAS2-203ENST00000393879 MED14O60244 1454 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 KNDC1Q76NI1 1749 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 AMOTQ4VCS5 1084 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 HOXC9P31274 260 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 CNTROBQ8N137 903 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 LRRFIP2Q9Y608 721 aaKnown RBP12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 ARHGEF40Q8TER5 1519 aa12.05□□□□□ -0.48
NKIRAS2-203ENST00000393879 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
NKIRAS2-203ENST00000393879 MX1P20591 662 aa12.04□□□□□ -0.48
NKIRAS2-203ENST00000393879 MCTP1Q6DN14 999 aa12.04□□□□□ -0.48
NKIRAS2-203ENST00000393879 CDK12Q9NYV4 1490 aaPredicted RBP12.04□□□□□ -0.48
NKIRAS2-203ENST00000393879 GOLGA6L4A6NEF3 574 aa12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 CEP85Q6P2H3 762 aa12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 SYAP1Q96A49 352 aaPredicted RBP12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 MYO5BQ9ULV0 1848 aa12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 EVA1CP58658 441 aa12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 C16orf71Q8IYS4 520 aaPredicted RBP12.03□□□□□ -0.48
NKIRAS2-203ENST00000393879 TMEM131LA2VDJ0 1609 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms