RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 RGPD2P0DJD1 1756 aa21.64■■□□□ 1.06
CSHL1-204ENST00000392824 APBA3O96018 575 aa21.64■■□□□ 1.05
CSHL1-204ENST00000392824 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
CSHL1-204ENST00000392824 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
CSHL1-204ENST00000392824 U2SURPO15042 1029 aaKnown RBP21.63■■□□□ 1.05
CSHL1-204ENST00000392824 DEFB132Q7Z7B7 95 aa21.63■■□□□ 1.05
CSHL1-204ENST00000392824 BCL11BQ9C0K0 894 aaPredicted RBP21.63■■□□□ 1.05
CSHL1-204ENST00000392824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.63■■□□□ 1.05
CSHL1-204ENST00000392824 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
CSHL1-204ENST00000392824 WNK3Q9BYP7 1800 aa21.63■■□□□ 1.05
CSHL1-204ENST00000392824 BCL9O00512 1426 aa21.63■■□□□ 1.05
CSHL1-204ENST00000392824 PCDH11XQ9BZA7 1347 aa21.62■■□□□ 1.05
CSHL1-204ENST00000392824 PCDH11YQ9BZA8 1340 aa21.62■■□□□ 1.05
CSHL1-204ENST00000392824 ACSBG1Q96GR2 724 aa21.62■■□□□ 1.05
CSHL1-204ENST00000392824 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
CSHL1-204ENST00000392824 AEBP1Q8IUX7 1158 aa21.61■■□□□ 1.05
CSHL1-204ENST00000392824 HMOX1P09601 288 aa21.6■■□□□ 1.05
CSHL1-204ENST00000392824 EN1Q05925 392 aaPredicted RBP21.59■■□□□ 1.05
CSHL1-204ENST00000392824 AMOTQ4VCS5 1084 aa21.59■■□□□ 1.05
CSHL1-204ENST00000392824 CYP27B1O15528 508 aa21.58■■□□□ 1.05
CSHL1-204ENST00000392824 KCNQ2O43526 872 aa21.58■■□□□ 1.05
CSHL1-204ENST00000392824 IFNL2Q8IZJ0 200 aa21.57■■□□□ 1.04
CSHL1-204ENST00000392824 SYTL4Q96C24 671 aaPredicted RBP21.57■■□□□ 1.04
CSHL1-204ENST00000392824 PLEKHG2Q9H7P9 1386 aa21.57■■□□□ 1.04
CSHL1-204ENST00000392824 KDRP35968 1356 aa21.56■■□□□ 1.04
CSHL1-204ENST00000392824 PRIM1P49642 420 aaKnown RBP21.55■■□□□ 1.04
CSHL1-204ENST00000392824 PTF1AQ7RTS3 328 aa21.55■■□□□ 1.04
CSHL1-204ENST00000392824 MYBBP1AQ9BQG0 1328 aaKnown RBP21.55■■□□□ 1.04
CSHL1-204ENST00000392824 COL3A1P02461 1466 aaPredicted RBP21.54■■□□□ 1.04
CSHL1-204ENST00000392824 U2AF1L5P0DN76 240 aaPredicted RBP21.54■■□□□ 1.04
CSHL1-204ENST00000392824 U2AF1Q01081 240 aaKnown RBP eCLIP21.54■■□□□ 1.04
CSHL1-204ENST00000392824 ZNF530Q6P9A1 599 aaPredicted RBP21.54■■□□□ 1.04
CSHL1-204ENST00000392824 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
CSHL1-204ENST00000392824 PHKG2P15735 406 aa21.53■■□□□ 1.04
CSHL1-204ENST00000392824 EZH2Q15910 746 aaKnown RBP21.53■■□□□ 1.04
CSHL1-204ENST00000392824 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
CSHL1-204ENST00000392824 CAMKK2Q96RR4 588 aa21.53■■□□□ 1.04
CSHL1-204ENST00000392824 RGPD1P0DJD0 1748 aa21.52■■□□□ 1.04
CSHL1-204ENST00000392824 PLSCR1O15162 318 aa21.52■■□□□ 1.04
CSHL1-204ENST00000392824 HSP90AB1P08238 724 aaKnown RBP21.52■■□□□ 1.04
CSHL1-204ENST00000392824 NKX1-1Q15270 411 aaPredicted RBP21.52■■□□□ 1.04
CSHL1-204ENST00000392824 FCHSD2O94868 740 aa21.48■■□□□ 1.03
CSHL1-204ENST00000392824 MPRIPQ6WCQ1 1025 aa21.48■■□□□ 1.03
CSHL1-204ENST00000392824 ANP32CO43423 234 aa21.47■■□□□ 1.03
CSHL1-204ENST00000392824 PRKAR2BP31323 418 aa21.47■■□□□ 1.03
CSHL1-204ENST00000392824 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
CSHL1-204ENST00000392824 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
CSHL1-204ENST00000392824 MTHFSDQ2M296 383 aaKnown RBP21.46■■□□□ 1.03
CSHL1-204ENST00000392824 AKAP4Q5JQC9 854 aa21.46■■□□□ 1.03
CSHL1-204ENST00000392824 RSPH6AQ9H0K4 717 aa21.46■■□□□ 1.03
CSHL1-204ENST00000392824 NEFMP07197 916 aa21.45■■□□□ 1.02
CSHL1-204ENST00000392824 PKD1L3Q7Z443 1732 aa21.45■■□□□ 1.02
CSHL1-204ENST00000392824 TNS1Q9HBL0 1735 aaKnown RBP21.44■■□□□ 1.02
CSHL1-204ENST00000392824 SBF2Q86WG5 1849 aa21.44■■□□□ 1.02
CSHL1-204ENST00000392824 GAS2L2Q8NHY3 880 aa21.44■■□□□ 1.02
CSHL1-204ENST00000392824 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
CSHL1-204ENST00000392824 TMOD3Q9NYL9 352 aa21.44■■□□□ 1.02
CSHL1-204ENST00000392824 SHANK3Q9BYB0 1731 aa21.43■■□□□ 1.02
CSHL1-204ENST00000392824 ERVV-2B6SEH9 535 aa21.43■■□□□ 1.02
CSHL1-204ENST00000392824 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
CSHL1-204ENST00000392824 NBPF14Q5TI25 921 aa21.43■■□□□ 1.02
CSHL1-204ENST00000392824 CABP4P57796 275 aa21.42■■□□□ 1.02
CSHL1-204ENST00000392824 PIGBQ92521 554 aa21.42■■□□□ 1.02
CSHL1-204ENST00000392824 NHSQ6T4R5 1651 aa21.41■■□□□ 1.02
CSHL1-204ENST00000392824 PROM2Q8N271 834 aa21.41■■□□□ 1.02
CSHL1-204ENST00000392824 PHACTR3Q96KR7 559 aa21.41■■□□□ 1.02
CSHL1-204ENST00000392824 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
CSHL1-204ENST00000392824 SMARCC1Q92922 1105 aaPredicted RBP21.4■■□□□ 1.02
CSHL1-204ENST00000392824 GNAT3A8MTJ3 354 aa21.38■■□□□ 1.01
CSHL1-204ENST00000392824 SLC27A3Q5K4L6 730 aa21.38■■□□□ 1.01
CSHL1-204ENST00000392824 RNMTO43148 476 aaKnown RBP21.37■■□□□ 1.01
CSHL1-204ENST00000392824 LGR6Q9HBX8 967 aa21.37■■□□□ 1.01
CSHL1-204ENST00000392824 DOT1LQ8TEK3 1739 aa21.36■■□□□ 1.01
CSHL1-204ENST00000392824 NFATC2IPQ8NCF5 419 aa21.36■■□□□ 1.01
CSHL1-204ENST00000392824 MAPK8IP3Q9UPT6 1336 aa21.35■■□□□ 1.01
CSHL1-204ENST00000392824 HMGB2P26583 209 aaKnown RBP21.35■■□□□ 1.01
CSHL1-204ENST00000392824 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
CSHL1-204ENST00000392824 KDM6AO15550 1401 aaPredicted RBP21.35■■□□□ 1.01
CSHL1-204ENST00000392824 MAP3K5Q99683 1374 aa21.35■■□□□ 1.01
CSHL1-204ENST00000392824 R3HDM1Q15032 1099 aaKnown RBP21.34■■□□□ 1.01
CSHL1-204ENST00000392824 RTF1Q92541 710 aaKnown RBP21.34■■□□□ 1.01
CSHL1-204ENST00000392824 STK32BQ9NY57 414 aa21.34■■□□□ 1.01
CSHL1-204ENST00000392824 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
CSHL1-204ENST00000392824 PALLDQ8WX93 1383 aa21.34■■□□□ 1.01
CSHL1-204ENST00000392824 BTAF1O14981 1849 aa21.34■■□□□ 1.01
CSHL1-204ENST00000392824 PSDA5PKW4 1024 aaPredicted RBP21.33■■□□□ 1.01
CSHL1-204ENST00000392824 PLEKHF1Q96S99 279 aa21.33■■□□□ 1.01
CSHL1-204ENST00000392824 SLC52A2Q9HAB3 445 aa21.33■■□□□ 1.01
CSHL1-204ENST00000392824 ATG3Q9NT62 314 aa21.33■■□□□ 1.01
CSHL1-204ENST00000392824 LRRC4BQ9NT99 713 aa21.33■■□□□ 1.01
CSHL1-204ENST00000392824 KCNQ4P56696 695 aa21.31■■□□□ 1
CSHL1-204ENST00000392824 TEFQ10587 303 aa21.31■■□□□ 1
CSHL1-204ENST00000392824 ADAMTS8Q9UP79 889 aa21.31■■□□□ 1
CSHL1-204ENST00000392824 HTATSF1O43719 755 aaKnown RBP21.3■■□□□ 1
CSHL1-204ENST00000392824 IL17REQ8NFR9 667 aa21.3■■□□□ 1
CSHL1-204ENST00000392824 RGPD3A6NKT7 1758 aaPredicted RBP21.3■■□□□ 1
CSHL1-204ENST00000392824 RGPD4Q7Z3J3 1758 aa21.3■■□□□ 1
CSHL1-204ENST00000392824 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
CSHL1-204ENST00000392824 MRS2Q9HD23 443 aa21.29■■□□□ 1
CSHL1-204ENST00000392824 TOGARAM1Q9Y4F4 1720 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms