RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 LTV1Q96GA3 475 aaPredicted RBP23.17■■□□□ 1.3
TRAF3-203ENST00000392745 MCM10Q7L590 875 aa23.16■■□□□ 1.3
TRAF3-203ENST00000392745 VAMP4O75379 141 aa23.16■■□□□ 1.3
TRAF3-203ENST00000392745 KRT28Q7Z3Y7 464 aa23.15■■□□□ 1.3
TRAF3-203ENST00000392745 ATF3P18847 181 aa23.15■■□□□ 1.3
TRAF3-203ENST00000392745 TBC1D32Q96NH3 1257 aa23.15■■□□□ 1.3
TRAF3-203ENST00000392745 NOB1Q9ULX3 412 aaKnown RBP23.15■■□□□ 1.3
TRAF3-203ENST00000392745 IP6K1Q92551 441 aa23.14■■□□□ 1.29
TRAF3-203ENST00000392745 TBC1D2Q9BYX2 928 aa23.14■■□□□ 1.29
TRAF3-203ENST00000392745 PDZRN3Q9UPQ7 1066 aa23.14■■□□□ 1.29
TRAF3-203ENST00000392745 TRIM27P14373 513 aa23.14■■□□□ 1.29
TRAF3-203ENST00000392745 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.29
TRAF3-203ENST00000392745 MST1RQ04912 1400 aa23.13■■□□□ 1.29
TRAF3-203ENST00000392745 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
TRAF3-203ENST00000392745 ELL2O00472 640 aaPredicted RBP23.13■■□□□ 1.29
TRAF3-203ENST00000392745 PLEKHG5O94827 1062 aa23.13■■□□□ 1.29
TRAF3-203ENST00000392745 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
TRAF3-203ENST00000392745 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
TRAF3-203ENST00000392745 KCNH5Q8NCM2 988 aa23.13■■□□□ 1.29
TRAF3-203ENST00000392745 DZIP1LQ8IYY4 767 aaKnown RBP23.13■■□□□ 1.29
TRAF3-203ENST00000392745 RTL1A6NKG5 1358 aa23.12■■□□□ 1.29
TRAF3-203ENST00000392745 C8orf58Q8NAV2 365 aa23.12■■□□□ 1.29
TRAF3-203ENST00000392745 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
TRAF3-203ENST00000392745 GCP02774 474 aa23.11■■□□□ 1.29
TRAF3-203ENST00000392745 UPF2Q9HAU5 1272 aaKnown RBP23.11■■□□□ 1.29
TRAF3-203ENST00000392745 RRAGDQ9NQL2 400 aaPredicted RBP23.11■■□□□ 1.29
TRAF3-203ENST00000392745 KIF1AQ12756 1690 aa23.11■■□□□ 1.29
TRAF3-203ENST00000392745 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
TRAF3-203ENST00000392745 ATF7IPQ6VMQ6 1270 aa23.1■■□□□ 1.29
TRAF3-203ENST00000392745 ZNF428Q96B54 188 aa23.1■■□□□ 1.29
TRAF3-203ENST00000392745 ZBTB7CA1YPR0 619 aa23.1■■□□□ 1.29
TRAF3-203ENST00000392745 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
TRAF3-203ENST00000392745 MVPQ14764 893 aaKnown RBP23.09■■□□□ 1.29
TRAF3-203ENST00000392745 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
TRAF3-203ENST00000392745 CHL1O00533 1208 aa23.09■■□□□ 1.29
TRAF3-203ENST00000392745 TWISTNBQ3B726 338 aaPredicted RBP23.09■■□□□ 1.29
TRAF3-203ENST00000392745 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
TRAF3-203ENST00000392745 USHBP1Q8N6Y0 703 aa23.09■■□□□ 1.29
TRAF3-203ENST00000392745 UBE2Q2Q8WVN8 375 aa23.09■■□□□ 1.29
TRAF3-203ENST00000392745 ARXQ96QS3 562 aa23.09■■□□□ 1.29
TRAF3-203ENST00000392745 L1TD1Q5T7N2 865 aaKnown RBP23.08■■□□□ 1.29
TRAF3-203ENST00000392745 DCCP43146 1447 aa23.08■■□□□ 1.29
TRAF3-203ENST00000392745 CRB1P82279 1406 aa23.07■■□□□ 1.28
TRAF3-203ENST00000392745 BRPF1P55201 1214 aaPredicted RBP23.07■■□□□ 1.28
TRAF3-203ENST00000392745 ARHGEF25Q86VW2 580 aa23.07■■□□□ 1.28
TRAF3-203ENST00000392745 SLIT3O75094 1523 aa23.07■■□□□ 1.28
TRAF3-203ENST00000392745 KIF16BQ96L93 1317 aa23.07■■□□□ 1.28
TRAF3-203ENST00000392745 NBPF6Q5VWK0 638 aa23.06■■□□□ 1.28
TRAF3-203ENST00000392745 GAS2L2Q8NHY3 880 aa23.06■■□□□ 1.28
TRAF3-203ENST00000392745 NBPF4Q96M43 638 aa23.06■■□□□ 1.28
TRAF3-203ENST00000392745 XIRP1Q702N8 1843 aaKnown RBP23.06■■□□□ 1.28
TRAF3-203ENST00000392745 PHRF1Q9P1Y6 1649 aaKnown RBP23.06■■□□□ 1.28
TRAF3-203ENST00000392745 CADPS2Q86UW7 1296 aa23.06■■□□□ 1.28
TRAF3-203ENST00000392745 MRPL50Q8N5N7 158 aaKnown RBP23.06■■□□□ 1.28
TRAF3-203ENST00000392745 AAMPQ13685 434 aa23.05■■□□□ 1.28
TRAF3-203ENST00000392745 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
TRAF3-203ENST00000392745 RGPD2P0DJD1 1756 aa23.05■■□□□ 1.28
TRAF3-203ENST00000392745 IPO8O15397 1037 aaKnown RBP23.05■■□□□ 1.28
TRAF3-203ENST00000392745 RTF1Q92541 710 aaKnown RBP23.04■■□□□ 1.28
TRAF3-203ENST00000392745 MIS18AQ9NYP9 233 aa23.04■■□□□ 1.28
TRAF3-203ENST00000392745 ALS2Q96Q42 1657 aa23.03■■□□□ 1.28
TRAF3-203ENST00000392745 RWDD1Q9H446 243 aaPredicted RBP23.03■■□□□ 1.28
TRAF3-203ENST00000392745 TMEM57Q8N5G2 664 aa23.03■■□□□ 1.28
TRAF3-203ENST00000392745 LRRC59Q96AG4 307 aaKnown RBP23.02■■□□□ 1.28
TRAF3-203ENST00000392745 XRCC6P12956 609 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRAF3-203ENST00000392745 MSH6P52701 1360 aa23.01■■□□□ 1.27
TRAF3-203ENST00000392745 ITPRIPQ8IWB1 547 aa23.01■■□□□ 1.27
TRAF3-203ENST00000392745 GZF1Q9H116 711 aaPredicted RBP23.01■■□□□ 1.27
TRAF3-203ENST00000392745 AXIN2Q9Y2T1 843 aa23.01■■□□□ 1.27
TRAF3-203ENST00000392745 GNAT3A8MTJ3 354 aa23■■□□□ 1.27
TRAF3-203ENST00000392745 MCM4P33991 863 aa23■■□□□ 1.27
TRAF3-203ENST00000392745 HTATSF1O43719 755 aaKnown RBP22.99■■□□□ 1.27
TRAF3-203ENST00000392745 DDX19BQ9UMR2 479 aa22.99■■□□□ 1.27
TRAF3-203ENST00000392745 ZNF335Q9H4Z2 1342 aaPredicted RBP22.99■■□□□ 1.27
TRAF3-203ENST00000392745 MED1Q15648 1581 aaPredicted RBP22.99■■□□□ 1.27
TRAF3-203ENST00000392745 GOLGA6L3A6NEY3 463 aa22.98■■□□□ 1.27
TRAF3-203ENST00000392745 IL17REQ8NFR9 667 aa22.98■■□□□ 1.27
TRAF3-203ENST00000392745 ARHGAP45Q92619 1136 aa22.98■■□□□ 1.27
TRAF3-203ENST00000392745 PANK2Q9BZ23 570 aa22.98■■□□□ 1.27
TRAF3-203ENST00000392745 KIAA0232Q92628 1395 aa22.97■■□□□ 1.27
TRAF3-203ENST00000392745 FSD2A1L4K1 749 aa22.97■■□□□ 1.27
TRAF3-203ENST00000392745 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
TRAF3-203ENST00000392745 RGPD5Q99666 1765 aa22.97■■□□□ 1.27
TRAF3-203ENST00000392745 NPHP3Q7Z494 1330 aa22.97■■□□□ 1.27
TRAF3-203ENST00000392745 MFAP1P55081 439 aaKnown RBP22.96■■□□□ 1.27
TRAF3-203ENST00000392745 C22orf23Q9BZE7 217 aa22.96■■□□□ 1.27
TRAF3-203ENST00000392745 TSPYL4Q9UJ04 414 aa22.96■■□□□ 1.27
TRAF3-203ENST00000392745 MAP3K5Q99683 1374 aa22.96■■□□□ 1.27
TRAF3-203ENST00000392745 ANKRD24Q8TF21 1146 aa22.96■■□□□ 1.27
TRAF3-203ENST00000392745 ZBTB40Q9NUA8 1239 aa22.94■■□□□ 1.26
TRAF3-203ENST00000392745 LRRC37A3O60309 1634 aa22.94■■□□□ 1.26
TRAF3-203ENST00000392745 CABLES1Q8TDN4 633 aa22.93■■□□□ 1.26
TRAF3-203ENST00000392745 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
TRAF3-203ENST00000392745 PXDNQ92626 1479 aa22.92■■□□□ 1.26
TRAF3-203ENST00000392745 CHMP5Q9NZZ3 219 aa22.92■■□□□ 1.26
TRAF3-203ENST00000392745 TRAK2O60296 914 aa22.9■■□□□ 1.26
TRAF3-203ENST00000392745 NCAPD2Q15021 1401 aa22.9■■□□□ 1.26
TRAF3-203ENST00000392745 ABCC4O15439 1325 aa22.9■■□□□ 1.26
TRAF3-203ENST00000392745 TNS3Q68CZ2 1445 aa22.9■■□□□ 1.26
TRAF3-203ENST00000392745 SPATA31A3Q5VYP0 1347 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms