RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SPRYD3Q8NCJ5 442 aa15.37■□□□□ 0.05
RFC5-201ENST00000392542 CHMP5Q9NZZ3 219 aa15.37■□□□□ 0.05
RFC5-201ENST00000392542 PIK3C2AO00443 1686 aa15.37■□□□□ 0.05
RFC5-201ENST00000392542 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
RFC5-201ENST00000392542 SNX21Q969T3 373 aa15.36■□□□□ 0.05
RFC5-201ENST00000392542 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
RFC5-201ENST00000392542 ATP10DQ9P241 1426 aa15.36■□□□□ 0.05
RFC5-201ENST00000392542 NGDNQ8NEJ9 315 aaKnown RBP15.36■□□□□ 0.05
RFC5-201ENST00000392542 IL27Q8NEV9 243 aa15.36■□□□□ 0.05
RFC5-201ENST00000392542 KDRP35968 1356 aa15.36■□□□□ 0.05
RFC5-201ENST00000392542 NCOA3Q9Y6Q9 1424 aa15.35■□□□□ 0.05
RFC5-201ENST00000392542 ANKRD44Q8N8A2 993 aa15.35■□□□□ 0.05
RFC5-201ENST00000392542 TBC1D9Q6ZT07 1266 aa15.35■□□□□ 0.05
RFC5-201ENST00000392542 MSH6P52701 1360 aa15.34■□□□□ 0.05
RFC5-201ENST00000392542 MTHFSDQ2M296 383 aaKnown RBP15.34■□□□□ 0.05
RFC5-201ENST00000392542 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
RFC5-201ENST00000392542 THEMISQ8N1K5 641 aaPredicted RBP15.34■□□□□ 0.05
RFC5-201ENST00000392542 ANKARQ7Z5J8 1434 aa15.34■□□□□ 0.05
RFC5-201ENST00000392542 IGSF1Q8N6C5 1336 aa15.33■□□□□ 0.05
RFC5-201ENST00000392542 RTF1Q92541 710 aaKnown RBP15.33■□□□□ 0.04
RFC5-201ENST00000392542 CEP170BQ9Y4F5 1589 aaPredicted RBP15.33■□□□□ 0.04
RFC5-201ENST00000392542 RTL1A6NKG5 1358 aa15.33■□□□□ 0.04
RFC5-201ENST00000392542 FOXO3O43524 673 aa15.33■□□□□ 0.04
RFC5-201ENST00000392542 CDC45O75419 566 aa15.33■□□□□ 0.04
RFC5-201ENST00000392542 AMPHP49418 695 aa15.33■□□□□ 0.04
RFC5-201ENST00000392542 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
RFC5-201ENST00000392542 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
RFC5-201ENST00000392542 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
RFC5-201ENST00000392542 EYA1Q99502 592 aa15.32■□□□□ 0.04
RFC5-201ENST00000392542 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
RFC5-201ENST00000392542 GSPT1P15170 499 aaKnown RBP15.32■□□□□ 0.04
RFC5-201ENST00000392542 MCM4P33991 863 aa15.32■□□□□ 0.04
RFC5-201ENST00000392542 KIF2CQ99661 725 aa15.32■□□□□ 0.04
RFC5-201ENST00000392542 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
RFC5-201ENST00000392542 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
RFC5-201ENST00000392542 LRRC37A3O60309 1634 aa15.31■□□□□ 0.04
RFC5-201ENST00000392542 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
RFC5-201ENST00000392542 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
RFC5-201ENST00000392542 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
RFC5-201ENST00000392542 MIS18AQ9NYP9 233 aa15.31■□□□□ 0.04
RFC5-201ENST00000392542 EIF5BO60841 1220 aaKnown RBP15.3■□□□□ 0.04
RFC5-201ENST00000392542 DDIT3P35638 169 aa15.3■□□□□ 0.04
RFC5-201ENST00000392542 TTC22Q5TAA0 569 aa15.3■□□□□ 0.04
RFC5-201ENST00000392542 MEIS3Q99687 375 aa15.29■□□□□ 0.04
RFC5-201ENST00000392542 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
RFC5-201ENST00000392542 NLRP6P59044 892 aa15.28■□□□□ 0.04
RFC5-201ENST00000392542 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
RFC5-201ENST00000392542 G2E3Q7L622 706 aa15.27■□□□□ 0.04
RFC5-201ENST00000392542 C16orf71Q8IYS4 520 aaPredicted RBP15.27■□□□□ 0.04
RFC5-201ENST00000392542 NWD1Q149M9 1564 aa15.27■□□□□ 0.04
RFC5-201ENST00000392542 HOXC9P31274 260 aa15.27■□□□□ 0.03
RFC5-201ENST00000392542 CCT4P50991 539 aaKnown RBP15.27■□□□□ 0.03
RFC5-201ENST00000392542 CIZ1Q9ULV3 898 aaPredicted RBP15.27■□□□□ 0.03
RFC5-201ENST00000392542 FAM208AQ9UK61 1670 aaKnown RBP15.27■□□□□ 0.03
RFC5-201ENST00000392542 KCNA6P17658 529 aa15.26■□□□□ 0.03
RFC5-201ENST00000392542 HMMRO75330 724 aa15.25■□□□□ 0.03
RFC5-201ENST00000392542 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
RFC5-201ENST00000392542 OTUD7AQ8TE49 926 aaPredicted RBP15.25■□□□□ 0.03
RFC5-201ENST00000392542 K7ELQ4 463 aaPredicted RBP15.24■□□□□ 0.03
RFC5-201ENST00000392542 L1TD1Q5T7N2 865 aaKnown RBP15.24■□□□□ 0.03
RFC5-201ENST00000392542 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
RFC5-201ENST00000392542 CACNA1FO60840 1977 aa15.24■□□□□ 0.03
RFC5-201ENST00000392542 F6X3S4 739 aa15.24■□□□□ 0.03
RFC5-201ENST00000392542 SMARCA5O60264 1052 aaPredicted RBP15.24■□□□□ 0.03
RFC5-201ENST00000392542 CD2BP2O95400 341 aaKnown RBP15.24■□□□□ 0.03
RFC5-201ENST00000392542 SLC4A10Q6U841 1118 aa15.24■□□□□ 0.03
RFC5-201ENST00000392542 DDX11L8A8MPP1 907 aa15.23■□□□□ 0.03
RFC5-201ENST00000392542 NUTM2GQ5VZR2 741 aa15.23■□□□□ 0.03
RFC5-201ENST00000392542 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
RFC5-201ENST00000392542 MAP3K5Q99683 1374 aa15.23■□□□□ 0.03
RFC5-201ENST00000392542 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
RFC5-201ENST00000392542 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
RFC5-201ENST00000392542 TRAK2O60296 914 aa15.22■□□□□ 0.03
RFC5-201ENST00000392542 CCDC30Q5VVM6 783 aa15.22■□□□□ 0.03
RFC5-201ENST00000392542 ABTB2Q8N961 1025 aa15.22■□□□□ 0.03
RFC5-201ENST00000392542 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
RFC5-201ENST00000392542 APBB1O00213 710 aa15.22■□□□□ 0.03
RFC5-201ENST00000392542 SDSP20132 328 aa15.22■□□□□ 0.03
RFC5-201ENST00000392542 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
RFC5-201ENST00000392542 GNAI2P04899 355 aa15.21■□□□□ 0.03
RFC5-201ENST00000392542 FLIIQ13045 1269 aa15.21■□□□□ 0.03
RFC5-201ENST00000392542 RAB3GAP1Q15042 981 aa15.21■□□□□ 0.03
RFC5-201ENST00000392542 RABEP1Q15276 862 aa15.21■□□□□ 0.03
RFC5-201ENST00000392542 LTN1O94822 1766 aa15.21■□□□□ 0.03
RFC5-201ENST00000392542 CHD2O14647 1828 aaKnown RBP15.21■□□□□ 0.02
RFC5-201ENST00000392542 HSP90AA1P07900 732 aaKnown RBP15.21■□□□□ 0.02
RFC5-201ENST00000392542 TNPO1Q92973 898 aaKnown RBP15.21■□□□□ 0.02
RFC5-201ENST00000392542 USP26Q9BXU7 913 aa15.21■□□□□ 0.02
RFC5-201ENST00000392542 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
RFC5-201ENST00000392542 IL17REQ8NFR9 667 aa15.2■□□□□ 0.02
RFC5-201ENST00000392542 OSBPL3Q9H4L5 887 aa15.19■□□□□ 0.02
RFC5-201ENST00000392542 FKBP5Q13451 457 aaPredicted RBP15.19■□□□□ 0.02
RFC5-201ENST00000392542 TAF7Q15545 349 aaPredicted RBP15.19■□□□□ 0.02
RFC5-201ENST00000392542 LTV1Q96GA3 475 aaPredicted RBP15.19■□□□□ 0.02
RFC5-201ENST00000392542 PHF8Q9UPP1 1060 aa15.19■□□□□ 0.02
RFC5-201ENST00000392542 GNAI3P08754 354 aa15.18■□□□□ 0.02
RFC5-201ENST00000392542 GBP4Q96PP9 640 aa15.18■□□□□ 0.02
RFC5-201ENST00000392542 PXDNLA1KZ92 1463 aa15.18■□□□□ 0.02
RFC5-201ENST00000392542 FSD2A1L4K1 749 aa15.18■□□□□ 0.02
RFC5-201ENST00000392542 GOLGA6L3A6NEY3 463 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms