RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
NLRP3-205ENST00000391827 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
NLRP3-205ENST00000391827 ELL2O00472 640 aaPredicted RBP13.54□□□□□ -0.24
NLRP3-205ENST00000391827 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
NLRP3-205ENST00000391827 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
NLRP3-205ENST00000391827 PTPRCP08575 1304 aa13.54□□□□□ -0.24
NLRP3-205ENST00000391827 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
NLRP3-205ENST00000391827 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
NLRP3-205ENST00000391827 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
NLRP3-205ENST00000391827 RGPD8O14715 1765 aaPredicted RBP13.53□□□□□ -0.24
NLRP3-205ENST00000391827 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
NLRP3-205ENST00000391827 ATP10DQ9P241 1426 aa13.52□□□□□ -0.25
NLRP3-205ENST00000391827 ANKRD45Q5TZF3 282 aa13.51□□□□□ -0.25
NLRP3-205ENST00000391827 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
NLRP3-205ENST00000391827 C1orf115Q9H7X2 142 aa13.51□□□□□ -0.25
NLRP3-205ENST00000391827 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
NLRP3-205ENST00000391827 MCM10Q7L590 875 aa13.5□□□□□ -0.25
NLRP3-205ENST00000391827 DCTPP1Q9H773 170 aa13.5□□□□□ -0.25
NLRP3-205ENST00000391827 NCOA3Q9Y6Q9 1424 aa13.5□□□□□ -0.25
NLRP3-205ENST00000391827 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
NLRP3-205ENST00000391827 NGDNQ8NEJ9 315 aaKnown RBP13.5□□□□□ -0.25
NLRP3-205ENST00000391827 SNX21Q969T3 373 aa13.5□□□□□ -0.25
NLRP3-205ENST00000391827 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
NLRP3-205ENST00000391827 RPAP2Q8IXW5 612 aaPredicted RBP13.49□□□□□ -0.25
NLRP3-205ENST00000391827 ANKRD44Q8N8A2 993 aa13.49□□□□□ -0.25
NLRP3-205ENST00000391827 GAS2L2Q8NHY3 880 aa13.49□□□□□ -0.25
NLRP3-205ENST00000391827 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
NLRP3-205ENST00000391827 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
NLRP3-205ENST00000391827 MTHFSDQ2M296 383 aaKnown RBP13.48□□□□□ -0.25
NLRP3-205ENST00000391827 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
NLRP3-205ENST00000391827 KRT24Q2M2I5 525 aa13.47□□□□□ -0.25
NLRP3-205ENST00000391827 EYA1Q99502 592 aa13.47□□□□□ -0.25
NLRP3-205ENST00000391827 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
NLRP3-205ENST00000391827 RTF1Q92541 710 aaKnown RBP13.46□□□□□ -0.25
NLRP3-205ENST00000391827 MSH6P52701 1360 aa13.46□□□□□ -0.25
NLRP3-205ENST00000391827 AMPHP49418 695 aa13.46□□□□□ -0.25
NLRP3-205ENST00000391827 HSCBQ8IWL3 235 aa13.46□□□□□ -0.26
NLRP3-205ENST00000391827 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.26
NLRP3-205ENST00000391827 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.26
NLRP3-205ENST00000391827 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
NLRP3-205ENST00000391827 KCNA6P17658 529 aa13.45□□□□□ -0.26
NLRP3-205ENST00000391827 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
NLRP3-205ENST00000391827 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
NLRP3-205ENST00000391827 CHD2O14647 1828 aaKnown RBP13.45□□□□□ -0.26
NLRP3-205ENST00000391827 FAM208AQ9UK61 1670 aaKnown RBP13.45□□□□□ -0.26
NLRP3-205ENST00000391827 DDIT3P35638 169 aa13.45□□□□□ -0.26
NLRP3-205ENST00000391827 PLEKHM2Q8IWE5 1019 aa13.45□□□□□ -0.26
NLRP3-205ENST00000391827 CDC45O75419 566 aa13.44□□□□□ -0.26
NLRP3-205ENST00000391827 HOXC9P31274 260 aa13.44□□□□□ -0.26
NLRP3-205ENST00000391827 TSPYL4Q9UJ04 414 aa13.44□□□□□ -0.26
NLRP3-205ENST00000391827 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
NLRP3-205ENST00000391827 FOXO3O43524 673 aa13.44□□□□□ -0.26
NLRP3-205ENST00000391827 ZMYND15Q9H091 742 aa13.44□□□□□ -0.26
NLRP3-205ENST00000391827 NLRP6P59044 892 aa13.43□□□□□ -0.26
NLRP3-205ENST00000391827 KIF2CQ99661 725 aa13.43□□□□□ -0.26
NLRP3-205ENST00000391827 SOX12O15370 315 aa13.43□□□□□ -0.26
NLRP3-205ENST00000391827 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
NLRP3-205ENST00000391827 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
NLRP3-205ENST00000391827 BRPF3Q9ULD4 1205 aa13.43□□□□□ -0.26
NLRP3-205ENST00000391827 PHRF1Q9P1Y6 1649 aaKnown RBP13.43□□□□□ -0.26
NLRP3-205ENST00000391827 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
NLRP3-205ENST00000391827 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
NLRP3-205ENST00000391827 GNAT3A8MTJ3 354 aa13.42□□□□□ -0.26
NLRP3-205ENST00000391827 MAP3K5Q99683 1374 aa13.42□□□□□ -0.26
NLRP3-205ENST00000391827 PXDNLA1KZ92 1463 aa13.41□□□□□ -0.26
NLRP3-205ENST00000391827 MEIS3Q99687 375 aa13.41□□□□□ -0.26
NLRP3-205ENST00000391827 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
NLRP3-205ENST00000391827 CACNA1FO60840 1977 aa13.41□□□□□ -0.26
NLRP3-205ENST00000391827 NFAT5O94916 1531 aa13.41□□□□□ -0.26
NLRP3-205ENST00000391827 HMMRO75330 724 aa13.4□□□□□ -0.26
NLRP3-205ENST00000391827 MCM4P33991 863 aa13.4□□□□□ -0.26
NLRP3-205ENST00000391827 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
NLRP3-205ENST00000391827 LTN1O94822 1766 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 CCDC30Q5VVM6 783 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 G2E3Q7L622 706 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 STK31Q9BXU1 1019 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 ADGRL3Q9HAR2 1447 aa13.39□□□□□ -0.27
NLRP3-205ENST00000391827 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
NLRP3-205ENST00000391827 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
NLRP3-205ENST00000391827 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
NLRP3-205ENST00000391827 CEMIPQ8WUJ3 1361 aa13.37□□□□□ -0.27
NLRP3-205ENST00000391827 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
NLRP3-205ENST00000391827 ANKLE2Q86XL3 938 aa13.36□□□□□ -0.27
NLRP3-205ENST00000391827 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
NLRP3-205ENST00000391827 FLIIQ13045 1269 aa13.36□□□□□ -0.27
NLRP3-205ENST00000391827 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
NLRP3-205ENST00000391827 IP6K1Q92551 441 aa13.36□□□□□ -0.27
NLRP3-205ENST00000391827 K7ELQ4 463 aaPredicted RBP13.36□□□□□ -0.27
NLRP3-205ENST00000391827 GNAI2P04899 355 aa13.36□□□□□ -0.27
NLRP3-205ENST00000391827 C16orf71Q8IYS4 520 aaPredicted RBP13.36□□□□□ -0.27
NLRP3-205ENST00000391827 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
NLRP3-205ENST00000391827 GNAI3P08754 354 aa13.35□□□□□ -0.27
NLRP3-205ENST00000391827 NCAPD2Q15021 1401 aa13.35□□□□□ -0.27
NLRP3-205ENST00000391827 F6X3S4 739 aa13.35□□□□□ -0.27
NLRP3-205ENST00000391827 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
NLRP3-205ENST00000391827 LMO7Q8WWI1 1683 aa13.35□□□□□ -0.27
NLRP3-205ENST00000391827 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms