RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 MEGF6O75095 1541 aa19.33■□□□□ 0.68
IGHV3-48-201ENST00000390624 KAT6BQ8WYB5 2073 aa19.32■□□□□ 0.68
IGHV3-48-201ENST00000390624 EYA1Q99502 592 aa19.31■□□□□ 0.68
IGHV3-48-201ENST00000390624 EIF4A2Q14240 407 aaKnown RBP19.3■□□□□ 0.68
IGHV3-48-201ENST00000390624 RREB1Q92766 1687 aa19.3■□□□□ 0.68
IGHV3-48-201ENST00000390624 PSDA5PKW4 1024 aaPredicted RBP19.29■□□□□ 0.68
IGHV3-48-201ENST00000390624 NBPF14Q5TI25 921 aa19.29■□□□□ 0.68
IGHV3-48-201ENST00000390624 NHSQ6T4R5 1651 aa19.29■□□□□ 0.68
IGHV3-48-201ENST00000390624 RGPD3A6NKT7 1758 aaPredicted RBP19.29■□□□□ 0.68
IGHV3-48-201ENST00000390624 RGPD4Q7Z3J3 1758 aa19.29■□□□□ 0.68
IGHV3-48-201ENST00000390624 R3HDM1Q15032 1099 aaKnown RBP19.28■□□□□ 0.68
IGHV3-48-201ENST00000390624 NCAPD2Q15021 1401 aa19.27■□□□□ 0.68
IGHV3-48-201ENST00000390624 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.68
IGHV3-48-201ENST00000390624 PROM2Q8N271 834 aa19.27■□□□□ 0.68
IGHV3-48-201ENST00000390624 NUP188Q5SRE5 1749 aa19.27■□□□□ 0.68
IGHV3-48-201ENST00000390624 SHANK3Q9BYB0 1731 aa19.27■□□□□ 0.68
IGHV3-48-201ENST00000390624 PCDH11XQ9BZA7 1347 aa19.25■□□□□ 0.67
IGHV3-48-201ENST00000390624 PCDH11YQ9BZA8 1340 aa19.25■□□□□ 0.67
IGHV3-48-201ENST00000390624 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
IGHV3-48-201ENST00000390624 PRIM1P49642 420 aaKnown RBP19.25■□□□□ 0.67
IGHV3-48-201ENST00000390624 TXNRD1Q16881 649 aa19.25■□□□□ 0.67
IGHV3-48-201ENST00000390624 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
IGHV3-48-201ENST00000390624 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
IGHV3-48-201ENST00000390624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
IGHV3-48-201ENST00000390624 BTAF1O14981 1849 aa19.23■□□□□ 0.67
IGHV3-48-201ENST00000390624 MTHFSP49914 203 aa19.23■□□□□ 0.67
IGHV3-48-201ENST00000390624 IGSF1Q8N6C5 1336 aa19.23■□□□□ 0.67
IGHV3-48-201ENST00000390624 CYP27B1O15528 508 aa19.22■□□□□ 0.67
IGHV3-48-201ENST00000390624 PKD1L3Q7Z443 1732 aa19.2■□□□□ 0.66
IGHV3-48-201ENST00000390624 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
IGHV3-48-201ENST00000390624 DOT1LQ8TEK3 1739 aa19.2■□□□□ 0.66
IGHV3-48-201ENST00000390624 IL13P35225 146 aa19.19■□□□□ 0.66
IGHV3-48-201ENST00000390624 PLEKHG2Q9H7P9 1386 aa19.19■□□□□ 0.66
IGHV3-48-201ENST00000390624 NKX1-1Q15270 411 aaPredicted RBP19.18■□□□□ 0.66
IGHV3-48-201ENST00000390624 IFNL2Q8IZJ0 200 aa19.17■□□□□ 0.66
IGHV3-48-201ENST00000390624 PLEKHO1Q53GL0 409 aaPredicted RBP19.16■□□□□ 0.66
IGHV3-48-201ENST00000390624 SULT6B1Q6IMI4 303 aa19.16■□□□□ 0.66
IGHV3-48-201ENST00000390624 ANO8Q9HCE9 1232 aaPredicted RBP19.16■□□□□ 0.66
IGHV3-48-201ENST00000390624 STK32BQ9NY57 414 aa19.16■□□□□ 0.66
IGHV3-48-201ENST00000390624 PHKG2P15735 406 aa19.15■□□□□ 0.66
IGHV3-48-201ENST00000390624 AMOTQ4VCS5 1084 aa19.15■□□□□ 0.66
IGHV3-48-201ENST00000390624 SLC27A3Q5K4L6 730 aa19.15■□□□□ 0.66
IGHV3-48-201ENST00000390624 MPRIPQ6WCQ1 1025 aa19.15■□□□□ 0.66
IGHV3-48-201ENST00000390624 DIAPH1O60610 1272 aaKnown RBP19.14■□□□□ 0.65
IGHV3-48-201ENST00000390624 SLC15A2Q16348 729 aa19.14■□□□□ 0.65
IGHV3-48-201ENST00000390624 AEBP1Q8IUX7 1158 aa19.14■□□□□ 0.65
IGHV3-48-201ENST00000390624 LRRC4BQ9NT99 713 aa19.14■□□□□ 0.65
IGHV3-48-201ENST00000390624 KDRP35968 1356 aa19.13■□□□□ 0.65
IGHV3-48-201ENST00000390624 LRP5O75197 1615 aa19.12■□□□□ 0.65
IGHV3-48-201ENST00000390624 ITGB4P16144 1822 aa19.11■□□□□ 0.65
IGHV3-48-201ENST00000390624 HSP90AB1P08238 724 aaKnown RBP19.1■□□□□ 0.65
IGHV3-48-201ENST00000390624 LY75O60449 1722 aa19.1■□□□□ 0.65
IGHV3-48-201ENST00000390624 TOGARAM1Q9Y4F4 1720 aa19.09■□□□□ 0.65
IGHV3-48-201ENST00000390624 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
IGHV3-48-201ENST00000390624 PIGBQ92521 554 aa19.09■□□□□ 0.65
IGHV3-48-201ENST00000390624 SMARCC1Q92922 1105 aaPredicted RBP19.09■□□□□ 0.65
IGHV3-48-201ENST00000390624 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
IGHV3-48-201ENST00000390624 CCNL1Q9UK58 526 aaPredicted RBP19.09■□□□□ 0.65
IGHV3-48-201ENST00000390624 HMOX1P09601 288 aa19.08■□□□□ 0.64
IGHV3-48-201ENST00000390624 HMGB2P26583 209 aaKnown RBP19.08■□□□□ 0.64
IGHV3-48-201ENST00000390624 KCNQ4P56696 695 aa19.08■□□□□ 0.64
IGHV3-48-201ENST00000390624 C1orf141Q5JVX7 400 aa19.08■□□□□ 0.64
IGHV3-48-201ENST00000390624 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
IGHV3-48-201ENST00000390624 SPON1Q9HCB6 807 aa19.08■□□□□ 0.64
IGHV3-48-201ENST00000390624 TMOD3Q9NYL9 352 aa19.08■□□□□ 0.64
IGHV3-48-201ENST00000390624 ERVV-2B6SEH9 535 aa19.07■□□□□ 0.64
IGHV3-48-201ENST00000390624 PPP2R1AP30153 589 aa19.07■□□□□ 0.64
IGHV3-48-201ENST00000390624 ZEB1P37275 1124 aaPredicted RBP19.07■□□□□ 0.64
IGHV3-48-201ENST00000390624 PAPPAQ13219 1627 aa19.07■□□□□ 0.64
IGHV3-48-201ENST00000390624 AKT1S1Q96B36 256 aa19.06■□□□□ 0.64
IGHV3-48-201ENST00000390624 PDGFDQ9GZP0 370 aaPredicted RBP19.06■□□□□ 0.64
IGHV3-48-201ENST00000390624 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
IGHV3-48-201ENST00000390624 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
IGHV3-48-201ENST00000390624 U2SURPO15042 1029 aaKnown RBP19.05■□□□□ 0.64
IGHV3-48-201ENST00000390624 ZNF827Q17R98 1081 aa19.05■□□□□ 0.64
IGHV3-48-201ENST00000390624 CASZ1Q86V15 1759 aa19.04■□□□□ 0.64
IGHV3-48-201ENST00000390624 TFCP2L1Q9NZI6 479 aa19.03■□□□□ 0.64
IGHV3-48-201ENST00000390624 ASAP1Q9ULH1 1129 aa19.03■□□□□ 0.64
IGHV3-48-201ENST00000390624 ZBTB7AO95365 584 aa19.02■□□□□ 0.64
IGHV3-48-201ENST00000390624 CABP4P57796 275 aa19.02■□□□□ 0.64
IGHV3-48-201ENST00000390624 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
IGHV3-48-201ENST00000390624 AKAP4Q5JQC9 854 aa19.02■□□□□ 0.64
IGHV3-48-201ENST00000390624 NUDCQ9Y266 331 aa19.02■□□□□ 0.64
IGHV3-48-201ENST00000390624 ATG3Q9NT62 314 aa19.01■□□□□ 0.63
IGHV3-48-201ENST00000390624 KDM6AO15550 1401 aaPredicted RBP19■□□□□ 0.63
IGHV3-48-201ENST00000390624 MTFR1LQ9H019 292 aa19■□□□□ 0.63
IGHV3-48-201ENST00000390624 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
IGHV3-48-201ENST00000390624 LOC102724428A0A0B4J2F2 783 aa18.99■□□□□ 0.63
IGHV3-48-201ENST00000390624 SIK1P57059 783 aa18.99■□□□□ 0.63
IGHV3-48-201ENST00000390624 MTHFSDQ2M296 383 aaKnown RBP18.99■□□□□ 0.63
IGHV3-48-201ENST00000390624 PPP1R1BQ9UD71 204 aaPredicted RBP18.99■□□□□ 0.63
IGHV3-48-201ENST00000390624 QSER1Q2KHR3 1735 aa18.99■□□□□ 0.63
IGHV3-48-201ENST00000390624 TAF1LQ8IZX4 1826 aa18.98■□□□□ 0.63
IGHV3-48-201ENST00000390624 NFATC2IPQ8NCF5 419 aa18.98■□□□□ 0.63
IGHV3-48-201ENST00000390624 SLC16A10Q8TF71 515 aa18.98■□□□□ 0.63
IGHV3-48-201ENST00000390624 C5P01031 1676 aa18.98■□□□□ 0.63
IGHV3-48-201ENST00000390624 PNPLA7Q6ZV29 1317 aa18.98■□□□□ 0.63
IGHV3-48-201ENST00000390624 SCN11AQ9UI33 1791 aa18.96■□□□□ 0.63
IGHV3-48-201ENST00000390624 ATP6V1AP38606 617 aa18.96■□□□□ 0.63
IGHV3-48-201ENST00000390624 PTGER2P43116 358 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms