RNA–Protein interactions for RNA: ENST00000390616.2

IGHV4-34-201, Transcript of immunoglobulin heavy variable 4-34, humanhuman

APPRIS P1 BASIC

Gene IGHV4-34, Length 400 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-34-201ENST00000390616 USP54Q70EL1 1684 aa11.2□□□□□ -0.62
IGHV4-34-201ENST00000390616 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
IGHV4-34-201ENST00000390616 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
IGHV4-34-201ENST00000390616 COL23A1Q86Y22 540 aaPredicted RBP11.2□□□□□ -0.62
IGHV4-34-201ENST00000390616 EVC2Q86UK5 1308 aa11.19□□□□□ -0.62
IGHV4-34-201ENST00000390616 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
IGHV4-34-201ENST00000390616 MSL1Q68DK7 614 aa11.19□□□□□ -0.62
IGHV4-34-201ENST00000390616 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
IGHV4-34-201ENST00000390616 KLRG1Q96E93 195 aa11.19□□□□□ -0.62
IGHV4-34-201ENST00000390616 USP47Q96K76 1375 aa11.18□□□□□ -0.62
IGHV4-34-201ENST00000390616 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
IGHV4-34-201ENST00000390616 ANKRD24Q8TF21 1146 aa11.18□□□□□ -0.62
IGHV4-34-201ENST00000390616 MON2Q7Z3U7 1717 aa11.18□□□□□ -0.62
IGHV4-34-201ENST00000390616 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
IGHV4-34-201ENST00000390616 PRIM1P49642 420 aaKnown RBP11.17□□□□□ -0.62
IGHV4-34-201ENST00000390616 KCNQ4P56696 695 aa11.17□□□□□ -0.62
IGHV4-34-201ENST00000390616 C16orf71Q8IYS4 520 aaPredicted RBP11.17□□□□□ -0.62
IGHV4-34-201ENST00000390616 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
IGHV4-34-201ENST00000390616 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
IGHV4-34-201ENST00000390616 TAF1LQ8IZX4 1826 aa11.16□□□□□ -0.62
IGHV4-34-201ENST00000390616 NSD2O96028 1365 aa11.16□□□□□ -0.62
IGHV4-34-201ENST00000390616 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
IGHV4-34-201ENST00000390616 FSTL1Q12841 308 aa11.15□□□□□ -0.62
IGHV4-34-201ENST00000390616 RAB3GAP2Q9H2M9 1393 aa11.15□□□□□ -0.63
IGHV4-34-201ENST00000390616 PCNTO95613 3336 aa11.13□□□□□ -0.63
IGHV4-34-201ENST00000390616 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
IGHV4-34-201ENST00000390616 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
IGHV4-34-201ENST00000390616 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
IGHV4-34-201ENST00000390616 SLC34A2O95436 690 aa11.12□□□□□ -0.63
IGHV4-34-201ENST00000390616 AK7Q96M32 723 aa11.12□□□□□ -0.63
IGHV4-34-201ENST00000390616 WWC3Q9ULE0 1092 aa11.12□□□□□ -0.63
IGHV4-34-201ENST00000390616 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
IGHV4-34-201ENST00000390616 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
IGHV4-34-201ENST00000390616 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
IGHV4-34-201ENST00000390616 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
IGHV4-34-201ENST00000390616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.1□□□□□ -0.63
IGHV4-34-201ENST00000390616 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
IGHV4-34-201ENST00000390616 TNRC6CQ9HCJ0 1690 aaKnown RBP11.1□□□□□ -0.63
IGHV4-34-201ENST00000390616 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
IGHV4-34-201ENST00000390616 C10orf71Q711Q0 1435 aa11.09□□□□□ -0.63
IGHV4-34-201ENST00000390616 PALLDQ8WX93 1383 aa11.09□□□□□ -0.63
IGHV4-34-201ENST00000390616 IP6K1Q92551 441 aa11.09□□□□□ -0.63
IGHV4-34-201ENST00000390616 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
IGHV4-34-201ENST00000390616 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
IGHV4-34-201ENST00000390616 SSFA2P28290 1259 aa11.08□□□□□ -0.64
IGHV4-34-201ENST00000390616 TGFB2P61812 414 aa11.08□□□□□ -0.64
IGHV4-34-201ENST00000390616 SMARCC1Q92922 1105 aaPredicted RBP11.08□□□□□ -0.64
IGHV4-34-201ENST00000390616 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 HTRA3P83110 453 aa11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 NME9Q86XW9 330 aa11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 SMC1BQ8NDV3 1235 aa11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 LTV1Q96GA3 475 aaPredicted RBP11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 BCS1LQ9Y276 419 aa11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 N4BP2Q86UW6 1770 aaPredicted RBP11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
IGHV4-34-201ENST00000390616 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 MEGF6O75095 1541 aa11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 PHF14O94880 888 aa11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 HSPA1AP0DMV8 641 aaKnown RBP11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 HSPA1BP0DMV9 641 aaKnown RBP11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 ARHGAP27Q6ZUM4 889 aa11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 EDC4Q6P2E9 1401 aaKnown RBP11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
IGHV4-34-201ENST00000390616 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
IGHV4-34-201ENST00000390616 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
IGHV4-34-201ENST00000390616 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
IGHV4-34-201ENST00000390616 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
IGHV4-34-201ENST00000390616 RAPGEF4Q8WZA2 1011 aa11.04□□□□□ -0.64
IGHV4-34-201ENST00000390616 ITGB4P16144 1822 aa11.04□□□□□ -0.64
IGHV4-34-201ENST00000390616 FCHSD2O94868 740 aa11.03□□□□□ -0.64
IGHV4-34-201ENST00000390616 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
IGHV4-34-201ENST00000390616 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
IGHV4-34-201ENST00000390616 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
IGHV4-34-201ENST00000390616 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
IGHV4-34-201ENST00000390616 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
IGHV4-34-201ENST00000390616 MMP10P09238 476 aa11.02□□□□□ -0.65
IGHV4-34-201ENST00000390616 AMPHP49418 695 aa11.02□□□□□ -0.65
IGHV4-34-201ENST00000390616 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
IGHV4-34-201ENST00000390616 ZC3H4Q9UPT8 1303 aaKnown RBP11.02□□□□□ -0.65
IGHV4-34-201ENST00000390616 ROCK2O75116 1388 aaKnown RBP11.02□□□□□ -0.65
IGHV4-34-201ENST00000390616 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
IGHV4-34-201ENST00000390616 HOXC9P31274 260 aa11.01□□□□□ -0.65
IGHV4-34-201ENST00000390616 TMC1Q8TDI8 760 aa11.01□□□□□ -0.65
IGHV4-34-201ENST00000390616 CCDC87Q9NVE4 849 aa11.01□□□□□ -0.65
IGHV4-34-201ENST00000390616 MAP2P11137 1827 aaKnown RBP11□□□□□ -0.65
IGHV4-34-201ENST00000390616 A0A0G2JLW4 131 aa11□□□□□ -0.65
IGHV4-34-201ENST00000390616 GNPATO15228 680 aa11□□□□□ -0.65
IGHV4-34-201ENST00000390616 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
IGHV4-34-201ENST00000390616 RRAGCQ9HB90 399 aa11□□□□□ -0.65
IGHV4-34-201ENST00000390616 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
IGHV4-34-201ENST00000390616 C4AP0C0L4 1744 aa11□□□□□ -0.65
IGHV4-34-201ENST00000390616 AMIGO3Q86WK7 504 aa10.99□□□□□ -0.65
IGHV4-34-201ENST00000390616 COG3Q96JB2 828 aa10.99□□□□□ -0.65
IGHV4-34-201ENST00000390616 RNF181Q9P0P0 153 aa10.99□□□□□ -0.65
IGHV4-34-201ENST00000390616 SBF1O95248 1867 aa10.98□□□□□ -0.65
IGHV4-34-201ENST00000390616 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms