RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FAM160A2Q8N612 972 aaPredicted RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 CERKQ8TCT0 537 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ITPKCQ96DU7 683 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 KLRG1Q96E93 195 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 THAP11Q96EK4 314 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 RBM33Q96EV2 1170 aaKnown RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 TRIM11Q96F44 468 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ZNF764Q96H86 408 aaPredicted RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 BTBD6Q96KE9 485 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 FAM84AQ96KN4 292 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ZSCAN10Q96SZ4 725 aaPredicted RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 KLF16Q9BXK1 252 aaPredicted RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 CUEDC1Q9NWM3 386 aaPredicted RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 RBM27Q9P2N5 1060 aaKnown RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 FAM198AQ9UFP1 575 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ANGEL1Q9UNK9 670 aaKnown RBP0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 MYRFQ9Y2G1 1151 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 KDM2AQ9Y2K7 1162 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 AHNAK2Q8IVF2 5795 aa0.25□□□□□ -2.37
TRAJ28-201ENST00000390509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 C3orf80F5H4A9 247 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 H7C1W4 665 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 RIOK3O14730 519 aaKnown RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 VGFO15240 615 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 SPINT1O43278 529 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 MAP3K7O43318 606 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 LILRB3O75022 631 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 DXOO77932 396 aaKnown RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 PAPLNO95428 1278 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 TGFB1P01137 390 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 CELA3BP08861 270 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 INSRRP14616 1297 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 FECHP22830 423 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 MMP16P51512 607 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 NR5A1Q13285 461 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 TMEM132AQ24JP5 1023 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 SKOR2Q2VWA4 1001 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 SPATS1Q496A3 300 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 PPP1R15BQ5SWA1 713 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 PRPF38BQ5VTL8 546 aaKnown RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 CIAPIN1Q6FI81 312 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 PRR23CQ6ZRP0 262 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 C1orf229Q6ZS94 237 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 CHSY3Q70JA7 882 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 ZNF575Q86XF7 245 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 RNF135Q8IUD6 432 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 SLC16A11Q8NCK7 471 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 CXorf38Q8TB03 319 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 GTPBP3Q969Y2 492 aaKnown RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 ZFP91Q96JP5 570 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 C20orf173Q96LM9 149 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 FBXL18Q96ME1 805 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 SSBP4Q9BWG4 385 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 MRIQ9BWK5 157 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 CDCA7Q9BWT1 371 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 PARD6AQ9NPB6 346 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 RTEL1Q9NZ71 1219 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 GGA1Q9UJY5 639 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 PHF24Q9UPV7 400 aa0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 SALL2Q9Y467 1007 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP0.24□□□□□ -2.37
TRAJ28-201ENST00000390509 CNTNAP4Q9C0A0 1308 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 A0A0G2JLL6 359 aaPredicted RBP0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 MEGF11A6BM72 1044 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 FAM229AH3BQW9 127 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 FSHBP01225 129 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 IGLV1-40P01703 118 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 ERBB2P04626 1255 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 ARAFP10398 606 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 BMP4P12644 408 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 SKIP12755 728 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 KRT10P13645 584 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 TNFRSF1AP19438 455 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 DNAJB2P25686 324 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 VARSP26640 1264 aaKnown RBP0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 GDF5P43026 501 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 INHBCP55103 352 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 KRTAP10-11P60412 298 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 SH3BP2P78314 561 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 RELBQ01201 579 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 EN1Q05925 392 aaPredicted RBP0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 MESP2Q0VG99 397 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 EFEMP1Q12805 493 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 GRIK4Q16099 956 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 TSR1Q2NL82 804 aaKnown RBP0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 PUS10Q3MIT2 529 aaKnown RBP0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 MORN1Q5T089 497 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 RSPH4AQ5TD94 716 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 XKR5Q6UX68 686 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 RIPOR1Q6ZS17 1223 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 VSIG10LQ86VR7 867 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 KLHL34Q8N239 644 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 CCDC24Q8N4L8 307 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 AGBL5Q8NDL9 886 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 SPATA3Q8NHX4 192 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 FAM174AQ8TBP5 190 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 RNF217Q8TC41 542 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 TMEM40Q8WWA1 233 aa0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 LENG1Q96BZ8 264 aaPredicted RBP0.23□□□□□ -2.37
TRAJ28-201ENST00000390509 NELL2Q99435 816 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms