RNA–Protein interactions for RNA: ENST00000390458.3

TRAV29DV5-201, Transcript of T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV29DV5, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV29DV5-201ENST00000390458 BTAF1O14981 1849 aa13.74□□□□□ -0.21
TRAV29DV5-201ENST00000390458 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
TRAV29DV5-201ENST00000390458 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
TRAV29DV5-201ENST00000390458 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
TRAV29DV5-201ENST00000390458 FLT4P35916 1363 aa13.72□□□□□ -0.21
TRAV29DV5-201ENST00000390458 GGNBP2Q9H3C7 697 aa13.72□□□□□ -0.21
TRAV29DV5-201ENST00000390458 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
TRAV29DV5-201ENST00000390458 CASZ1Q86V15 1759 aa13.72□□□□□ -0.21
TRAV29DV5-201ENST00000390458 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
TRAV29DV5-201ENST00000390458 INSRP06213 1382 aa13.71□□□□□ -0.21
TRAV29DV5-201ENST00000390458 CCER1Q8TC90 406 aaPredicted RBP13.71□□□□□ -0.21
TRAV29DV5-201ENST00000390458 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAV29DV5-201ENST00000390458 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
TRAV29DV5-201ENST00000390458 PAPPAQ13219 1627 aa13.69□□□□□ -0.22
TRAV29DV5-201ENST00000390458 RRS1Q15050 365 aaKnown RBP13.69□□□□□ -0.22
TRAV29DV5-201ENST00000390458 TXNRD1Q16881 649 aa13.69□□□□□ -0.22
TRAV29DV5-201ENST00000390458 PTF1AQ7RTS3 328 aa13.69□□□□□ -0.22
TRAV29DV5-201ENST00000390458 SPON1Q9HCB6 807 aa13.69□□□□□ -0.22
TRAV29DV5-201ENST00000390458 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
TRAV29DV5-201ENST00000390458 MEGF6O75095 1541 aa13.69□□□□□ -0.22
TRAV29DV5-201ENST00000390458 PROM2Q8N271 834 aa13.68□□□□□ -0.22
TRAV29DV5-201ENST00000390458 CARD14Q9BXL6 1004 aa13.68□□□□□ -0.22
TRAV29DV5-201ENST00000390458 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
TRAV29DV5-201ENST00000390458 KCNQ2O43526 872 aa13.67□□□□□ -0.22
TRAV29DV5-201ENST00000390458 ANO8Q9HCE9 1232 aaPredicted RBP13.67□□□□□ -0.22
TRAV29DV5-201ENST00000390458 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
TRAV29DV5-201ENST00000390458 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
TRAV29DV5-201ENST00000390458 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
TRAV29DV5-201ENST00000390458 FBLN1P23142 703 aa13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 QSER1Q2KHR3 1735 aa13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 NSD2O96028 1365 aa13.66□□□□□ -0.22
TRAV29DV5-201ENST00000390458 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
TRAV29DV5-201ENST00000390458 LY75O60449 1722 aa13.65□□□□□ -0.22
TRAV29DV5-201ENST00000390458 ZBTB22O15209 634 aa13.65□□□□□ -0.22
TRAV29DV5-201ENST00000390458 SLC27A3Q5K4L6 730 aa13.65□□□□□ -0.22
TRAV29DV5-201ENST00000390458 NBPF6Q5VWK0 638 aa13.65□□□□□ -0.22
TRAV29DV5-201ENST00000390458 NBPF4Q96M43 638 aa13.65□□□□□ -0.22
TRAV29DV5-201ENST00000390458 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
TRAV29DV5-201ENST00000390458 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
TRAV29DV5-201ENST00000390458 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
TRAV29DV5-201ENST00000390458 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
TRAV29DV5-201ENST00000390458 HSP90AB2PQ58FF8 381 aa13.64□□□□□ -0.23
TRAV29DV5-201ENST00000390458 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
TRAV29DV5-201ENST00000390458 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
TRAV29DV5-201ENST00000390458 HMGB2P26583 209 aaKnown RBP13.63□□□□□ -0.23
TRAV29DV5-201ENST00000390458 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
TRAV29DV5-201ENST00000390458 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
TRAV29DV5-201ENST00000390458 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
TRAV29DV5-201ENST00000390458 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
TRAV29DV5-201ENST00000390458 SYTL4Q96C24 671 aaPredicted RBP13.6□□□□□ -0.23
TRAV29DV5-201ENST00000390458 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
TRAV29DV5-201ENST00000390458 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
TRAV29DV5-201ENST00000390458 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
TRAV29DV5-201ENST00000390458 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
TRAV29DV5-201ENST00000390458 PANK3Q9H999 370 aa13.58□□□□□ -0.24
TRAV29DV5-201ENST00000390458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRAV29DV5-201ENST00000390458 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
TRAV29DV5-201ENST00000390458 ITGB4P16144 1822 aa13.57□□□□□ -0.24
TRAV29DV5-201ENST00000390458 C5P01031 1676 aa13.57□□□□□ -0.24
TRAV29DV5-201ENST00000390458 COL24A1Q17RW2 1714 aa13.57□□□□□ -0.24
TRAV29DV5-201ENST00000390458 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
TRAV29DV5-201ENST00000390458 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
TRAV29DV5-201ENST00000390458 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
TRAV29DV5-201ENST00000390458 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
TRAV29DV5-201ENST00000390458 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
TRAV29DV5-201ENST00000390458 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
TRAV29DV5-201ENST00000390458 PTGER2P43116 358 aa13.56□□□□□ -0.24
TRAV29DV5-201ENST00000390458 SLC16A10Q8TF71 515 aa13.56□□□□□ -0.24
TRAV29DV5-201ENST00000390458 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
TRAV29DV5-201ENST00000390458 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
TRAV29DV5-201ENST00000390458 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
TRAV29DV5-201ENST00000390458 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
TRAV29DV5-201ENST00000390458 CYP27B1O15528 508 aa13.54□□□□□ -0.24
TRAV29DV5-201ENST00000390458 EYA1Q99502 592 aa13.54□□□□□ -0.24
TRAV29DV5-201ENST00000390458 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
TRAV29DV5-201ENST00000390458 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
TRAV29DV5-201ENST00000390458 TAF1LQ8IZX4 1826 aa13.54□□□□□ -0.24
TRAV29DV5-201ENST00000390458 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
TRAV29DV5-201ENST00000390458 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
TRAV29DV5-201ENST00000390458 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
TRAV29DV5-201ENST00000390458 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
TRAV29DV5-201ENST00000390458 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
TRAV29DV5-201ENST00000390458 TNNT2P45379 298 aaPredicted RBP13.52□□□□□ -0.25
TRAV29DV5-201ENST00000390458 EIF4A2Q14240 407 aaKnown RBP13.52□□□□□ -0.25
TRAV29DV5-201ENST00000390458 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
TRAV29DV5-201ENST00000390458 PALLDQ8WX93 1383 aa13.52□□□□□ -0.25
TRAV29DV5-201ENST00000390458 KIF7Q2M1P5 1343 aa13.51□□□□□ -0.25
TRAV29DV5-201ENST00000390458 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
TRAV29DV5-201ENST00000390458 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
TRAV29DV5-201ENST00000390458 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
TRAV29DV5-201ENST00000390458 ARXQ96QS3 562 aa13.5□□□□□ -0.25
TRAV29DV5-201ENST00000390458 C4BP0C0L5 1744 aa13.5□□□□□ -0.25
TRAV29DV5-201ENST00000390458 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
TRAV29DV5-201ENST00000390458 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
TRAV29DV5-201ENST00000390458 POLD1P28340 1107 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms