RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 AMPHP49418 695 aa13.86□□□□□ -0.19
TRAV18-201ENST00000390446 IP6K1Q92551 441 aa13.86□□□□□ -0.19
TRAV18-201ENST00000390446 QSER1Q2KHR3 1735 aa13.86□□□□□ -0.19
TRAV18-201ENST00000390446 IGSF1Q8N6C5 1336 aa13.86□□□□□ -0.19
TRAV18-201ENST00000390446 PHF14O94880 888 aa13.85□□□□□ -0.19
TRAV18-201ENST00000390446 AK7Q96M32 723 aa13.85□□□□□ -0.19
TRAV18-201ENST00000390446 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
TRAV18-201ENST00000390446 USP31Q70CQ4 1352 aa13.84□□□□□ -0.19
TRAV18-201ENST00000390446 KIF3CO14782 793 aa13.84□□□□□ -0.19
TRAV18-201ENST00000390446 C16orf71Q8IYS4 520 aaPredicted RBP13.84□□□□□ -0.19
TRAV18-201ENST00000390446 TERF2IPQ9NYB0 399 aa13.84□□□□□ -0.19
TRAV18-201ENST00000390446 TOMM70O94826 608 aa13.83□□□□□ -0.2
TRAV18-201ENST00000390446 UTRNP46939 3433 aa13.83□□□□□ -0.2
TRAV18-201ENST00000390446 LTN1O94822 1766 aa13.82□□□□□ -0.2
TRAV18-201ENST00000390446 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
TRAV18-201ENST00000390446 RAPGEF4Q8WZA2 1011 aa13.82□□□□□ -0.2
TRAV18-201ENST00000390446 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
TRAV18-201ENST00000390446 ADCY9O60503 1353 aa13.82□□□□□ -0.2
TRAV18-201ENST00000390446 COL24A1Q17RW2 1714 aa13.81□□□□□ -0.2
TRAV18-201ENST00000390446 TUBGCP6Q96RT7 1819 aa13.81□□□□□ -0.2
TRAV18-201ENST00000390446 COG3Q96JB2 828 aa13.81□□□□□ -0.2
TRAV18-201ENST00000390446 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
TRAV18-201ENST00000390446 DOT1LQ8TEK3 1739 aa13.79□□□□□ -0.2
TRAV18-201ENST00000390446 TATP17735 454 aaPredicted RBP13.79□□□□□ -0.2
TRAV18-201ENST00000390446 ARHGAP27Q6ZUM4 889 aa13.79□□□□□ -0.2
TRAV18-201ENST00000390446 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
TRAV18-201ENST00000390446 BCS1LQ9Y276 419 aa13.79□□□□□ -0.2
TRAV18-201ENST00000390446 NSD2O96028 1365 aa13.79□□□□□ -0.2
TRAV18-201ENST00000390446 HOXC9P31274 260 aa13.78□□□□□ -0.2
TRAV18-201ENST00000390446 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
TRAV18-201ENST00000390446 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
TRAV18-201ENST00000390446 DNAJC5GQ8N7S2 189 aa13.78□□□□□ -0.2
TRAV18-201ENST00000390446 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
TRAV18-201ENST00000390446 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
TRAV18-201ENST00000390446 SBNO2Q9Y2G9 1366 aa13.78□□□□□ -0.2
TRAV18-201ENST00000390446 LY75O60449 1722 aa13.78□□□□□ -0.2
TRAV18-201ENST00000390446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
TRAV18-201ENST00000390446 COL13A1Q5TAT6 717 aaPredicted RBP13.77□□□□□ -0.21
TRAV18-201ENST00000390446 EDC4Q6P2E9 1401 aaKnown RBP13.76□□□□□ -0.21
TRAV18-201ENST00000390446 MAP3K19Q56UN5 1328 aa13.76□□□□□ -0.21
TRAV18-201ENST00000390446 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
TRAV18-201ENST00000390446 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
TRAV18-201ENST00000390446 CGNL1Q0VF96 1302 aa13.75□□□□□ -0.21
TRAV18-201ENST00000390446 FBLN1P23142 703 aa13.75□□□□□ -0.21
TRAV18-201ENST00000390446 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
TRAV18-201ENST00000390446 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 PCDH11XQ9BZA7 1347 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 PCDH11YQ9BZA8 1340 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 HTRA3P83110 453 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 KLRG1Q96E93 195 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
TRAV18-201ENST00000390446 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
TRAV18-201ENST00000390446 C5P01031 1676 aa13.73□□□□□ -0.21
TRAV18-201ENST00000390446 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
TRAV18-201ENST00000390446 A0A0G2JLW4 131 aa13.73□□□□□ -0.21
TRAV18-201ENST00000390446 GNPATO15228 680 aa13.73□□□□□ -0.21
TRAV18-201ENST00000390446 FCHSD2O94868 740 aa13.73□□□□□ -0.21
TRAV18-201ENST00000390446 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
TRAV18-201ENST00000390446 MEGF6O75095 1541 aa13.73□□□□□ -0.21
TRAV18-201ENST00000390446 MMP10P09238 476 aa13.72□□□□□ -0.21
TRAV18-201ENST00000390446 SSFA2P28290 1259 aa13.72□□□□□ -0.21
TRAV18-201ENST00000390446 RRS1Q15050 365 aaKnown RBP13.72□□□□□ -0.21
TRAV18-201ENST00000390446 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
TRAV18-201ENST00000390446 A0A1W2PP64 1363 aa13.71□□□□□ -0.21
TRAV18-201ENST00000390446 TGFB2P61812 414 aa13.71□□□□□ -0.21
TRAV18-201ENST00000390446 KDM2BQ8NHM5 1336 aa13.7□□□□□ -0.22
TRAV18-201ENST00000390446 CD163L1Q9NR16 1453 aa13.7□□□□□ -0.22
TRAV18-201ENST00000390446 CEP350Q5VT06 3117 aa13.7□□□□□ -0.22
TRAV18-201ENST00000390446 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
TRAV18-201ENST00000390446 PRELPP51888 382 aa13.7□□□□□ -0.22
TRAV18-201ENST00000390446 FSTL1Q12841 308 aa13.7□□□□□ -0.22
TRAV18-201ENST00000390446 C9orf131Q5VYM1 1079 aa13.7□□□□□ -0.22
TRAV18-201ENST00000390446 USP54Q70EL1 1684 aa13.69□□□□□ -0.22
TRAV18-201ENST00000390446 AMIGO3Q86WK7 504 aa13.69□□□□□ -0.22
TRAV18-201ENST00000390446 CCDC87Q9NVE4 849 aa13.69□□□□□ -0.22
TRAV18-201ENST00000390446 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 LOC102724428A0A0B4J2F2 783 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 SIK1P57059 783 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 TRAPPC3LQ5T215 181 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 NLGN1Q8N2Q7 840 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 LINC00116Q8NCU8 138 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 PIGBQ92521 554 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 RRAGCQ9HB90 399 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
TRAV18-201ENST00000390446 DPEP1P16444 411 aa13.67□□□□□ -0.22
TRAV18-201ENST00000390446 TMF1P82094 1093 aa13.67□□□□□ -0.22
TRAV18-201ENST00000390446 JMYQ8N9B5 988 aa13.67□□□□□ -0.22
TRAV18-201ENST00000390446 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
TRAV18-201ENST00000390446 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
TRAV18-201ENST00000390446 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
TRAV18-201ENST00000390446 CYP27B1O15528 508 aa13.66□□□□□ -0.22
TRAV18-201ENST00000390446 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
TRAV18-201ENST00000390446 RNF181Q9P0P0 153 aa13.66□□□□□ -0.22
TRAV18-201ENST00000390446 RTCBQ9Y3I0 505 aaKnown RBP13.66□□□□□ -0.22
TRAV18-201ENST00000390446 RTL1A6NKG5 1358 aa13.66□□□□□ -0.22
TRAV18-201ENST00000390446 WDR90Q96KV7 1748 aa13.65□□□□□ -0.22
TRAV18-201ENST00000390446 PPM1GO15355 546 aaPredicted RBP13.65□□□□□ -0.22
TRAV18-201ENST00000390446 RFC4P35249 363 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms