RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 ZSCAN30Q86W11 494 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 SIL1Q9H173 461 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 EIF4G3O43432 1585 aaKnown RBP19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 BTBD11A6QL63 1104 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 HOMER1Q86YM7 354 aa19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 UPF3BQ9BZI7 483 aaKnown RBP19.26■□□□□ 0.67
PTPRN2-201ENST00000389413 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
PTPRN2-201ENST00000389413 TPM1P09493 284 aa19.25■□□□□ 0.67
PTPRN2-201ENST00000389413 JAKMIP1Q96N16 626 aaKnown RBP19.25■□□□□ 0.67
PTPRN2-201ENST00000389413 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
PTPRN2-201ENST00000389413 KINO60870 393 aaKnown RBP19.25■□□□□ 0.67
PTPRN2-201ENST00000389413 TAF7Q15545 349 aaPredicted RBP19.25■□□□□ 0.67
PTPRN2-201ENST00000389413 BLOC1S2Q6QNY1 142 aa19.25■□□□□ 0.67
PTPRN2-201ENST00000389413 SYCE3A1L190 88 aa19.24■□□□□ 0.67
PTPRN2-201ENST00000389413 TATP17735 454 aaPredicted RBP19.24■□□□□ 0.67
PTPRN2-201ENST00000389413 FBLN1P23142 703 aa19.24■□□□□ 0.67
PTPRN2-201ENST00000389413 TTC22Q5TAA0 569 aa19.24■□□□□ 0.67
PTPRN2-201ENST00000389413 GLRX3O76003 335 aaKnown RBP19.23■□□□□ 0.67
PTPRN2-201ENST00000389413 SAFBQ15424 915 aaKnown RBP eCLIP19.23■□□□□ 0.672e-6■■■□□ 15.9
PTPRN2-201ENST00000389413 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
PTPRN2-201ENST00000389413 PES1O00541 588 aaKnown RBP19.22■□□□□ 0.67
PTPRN2-201ENST00000389413 PDIA4P13667 645 aaKnown RBP19.22■□□□□ 0.67
PTPRN2-201ENST00000389413 TSR1Q2NL82 804 aaKnown RBP19.22■□□□□ 0.67
PTPRN2-201ENST00000389413 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
PTPRN2-201ENST00000389413 CCAR2Q8N163 923 aaKnown RBP19.22■□□□□ 0.67
PTPRN2-201ENST00000389413 GOLGA6L1Q8N7Z2 621 aa19.22■□□□□ 0.67
PTPRN2-201ENST00000389413 ERICH2A1L162 156 aa19.22■□□□□ 0.67
PTPRN2-201ENST00000389413 KDM6BO15054 1643 aa19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 STK3Q13188 491 aa19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 ZNF396Q96N95 335 aaPredicted RBP19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 SEC24BO95487 1268 aa19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 FLIIQ13045 1269 aa19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 ZNF518AQ6AHZ1 1483 aa19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 SMC5Q8IY18 1101 aa19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 TNMDQ9H2S6 317 aa19.21■□□□□ 0.67
PTPRN2-201ENST00000389413 CASTP20810 708 aaKnown RBP19.2■□□□□ 0.66
PTPRN2-201ENST00000389413 LRRFIP2Q9Y608 721 aaKnown RBP19.2■□□□□ 0.66
PTPRN2-201ENST00000389413 BAG4O95429 457 aaKnown RBP19.2■□□□□ 0.66
PTPRN2-201ENST00000389413 DHX16O60231 1041 aaKnown RBP19.2■□□□□ 0.66
PTPRN2-201ENST00000389413 SNX21Q969T3 373 aa19.2■□□□□ 0.66
PTPRN2-201ENST00000389413 WDR7Q9Y4E6 1490 aa19.2■□□□□ 0.66
PTPRN2-201ENST00000389413 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
PTPRN2-201ENST00000389413 SPC24Q8NBT2 197 aa19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 ZBTB40Q9NUA8 1239 aa19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 MYL6BP14649 208 aa19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 MPNDQ8N594 471 aa19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 SYTL4Q96C24 671 aaPredicted RBP19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 POLKQ9UBT6 870 aa19.19■□□□□ 0.66
PTPRN2-201ENST00000389413 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
PTPRN2-201ENST00000389413 KRT32Q14532 448 aa19.18■□□□□ 0.66
PTPRN2-201ENST00000389413 KCNH5Q8NCM2 988 aa19.18■□□□□ 0.66
PTPRN2-201ENST00000389413 SPG7Q9UQ90 795 aa19.17■□□□□ 0.66
PTPRN2-201ENST00000389413 KLHL40Q2TBA0 621 aa19.17■□□□□ 0.66
PTPRN2-201ENST00000389413 ANKRD20A12PQ8NF67 263 aa19.17■□□□□ 0.66
PTPRN2-201ENST00000389413 RBM10P98175 930 aaKnown RBP19.17■□□□□ 0.66
PTPRN2-201ENST00000389413 ANKRD44Q8N8A2 993 aa19.17■□□□□ 0.66
PTPRN2-201ENST00000389413 C8orf58Q8NAV2 365 aa19.17■□□□□ 0.66
PTPRN2-201ENST00000389413 SPATA32Q96LK8 384 aa19.17■□□□□ 0.66
PTPRN2-201ENST00000389413 VAMP4O75379 141 aa19.16■□□□□ 0.66
PTPRN2-201ENST00000389413 OLFM4Q6UX06 510 aa19.16■□□□□ 0.66
PTPRN2-201ENST00000389413 STK38Q15208 465 aa19.16■□□□□ 0.66
PTPRN2-201ENST00000389413 ZNF771Q7L3S4 317 aaPredicted RBP19.16■□□□□ 0.66
PTPRN2-201ENST00000389413 CCDC158Q5M9N0 1113 aa19.16■□□□□ 0.66
PTPRN2-201ENST00000389413 SDSP20132 328 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 VPS37DQ86XT2 251 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 DNAAF4Q8WXU2 420 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 NUP62CLQ9H1M0 184 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 CABP4P57796 275 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 PRPF40BQ6NWY9 871 aaKnown RBP19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 MEIS3Q99687 375 aa19.15■□□□□ 0.66
PTPRN2-201ENST00000389413 ACEP12821 1306 aa19.14■□□□□ 0.66
PTPRN2-201ENST00000389413 MARCH6O60337 910 aa19.14■□□□□ 0.65
PTPRN2-201ENST00000389413 A0A1W2PP64 1363 aa19.14■□□□□ 0.65
PTPRN2-201ENST00000389413 POGZQ7Z3K3 1410 aa19.14■□□□□ 0.65
PTPRN2-201ENST00000389413 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
PTPRN2-201ENST00000389413 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPRN2-201ENST00000389413 GPS2Q13227 327 aa19.13■□□□□ 0.65
PTPRN2-201ENST00000389413 TMX4Q9H1E5 349 aaPredicted RBP19.13■□□□□ 0.65
PTPRN2-201ENST00000389413 CFAP45Q9UL16 551 aa19.13■□□□□ 0.65
PTPRN2-201ENST00000389413 LIMCH1Q9UPQ0 1083 aa19.13■□□□□ 0.65
PTPRN2-201ENST00000389413 SH2B1Q9NRF2 756 aaPredicted RBP19.13■□□□□ 0.65
PTPRN2-201ENST00000389413 MNS1Q8NEH6 495 aa19.13■□□□□ 0.65
PTPRN2-201ENST00000389413 RRP9O43818 475 aaKnown RBP19.12■□□□□ 0.65
PTPRN2-201ENST00000389413 ME1P48163 572 aa19.12■□□□□ 0.65
PTPRN2-201ENST00000389413 TTC39AQ5SRH9 613 aa19.12■□□□□ 0.65
PTPRN2-201ENST00000389413 USHBP1Q8N6Y0 703 aa19.12■□□□□ 0.65
PTPRN2-201ENST00000389413 KDM5CP41229 1560 aa19.12■□□□□ 0.65
PTPRN2-201ENST00000389413 UQCRHLA0A096LP55 91 aa19.12■□□□□ 0.65
PTPRN2-201ENST00000389413 UQCRHP07919 91 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms