RNA–Protein interactions for RNA: ENST00000382671.8

PSMD13-202, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,489 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-202ENST00000382671 ZCRB1Q8TBF4 217 aaKnown RBP21.45■■□□□ 1.03
PSMD13-202ENST00000382671 APBA3O96018 575 aa21.45■■□□□ 1.02
PSMD13-202ENST00000382671 EN1Q05925 392 aaPredicted RBP21.44■■□□□ 1.02
PSMD13-202ENST00000382671 BCL11BQ9C0K0 894 aaPredicted RBP21.44■■□□□ 1.02
PSMD13-202ENST00000382671 RREB1Q92766 1687 aa21.43■■□□□ 1.02
PSMD13-202ENST00000382671 MTHFSP49914 203 aa21.43■■□□□ 1.02
PSMD13-202ENST00000382671 DDX54Q8TDD1 881 aaKnown RBP21.43■■□□□ 1.02
PSMD13-202ENST00000382671 CAMKK2Q96RR4 588 aa21.42■■□□□ 1.02
PSMD13-202ENST00000382671 IGSF1Q8N6C5 1336 aa21.42■■□□□ 1.02
PSMD13-202ENST00000382671 PARD3Q8TEW0 1356 aa21.42■■□□□ 1.02
PSMD13-202ENST00000382671 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
PSMD13-202ENST00000382671 DOT1LQ8TEK3 1739 aa21.41■■□□□ 1.02
PSMD13-202ENST00000382671 BTAF1O14981 1849 aa21.41■■□□□ 1.02
PSMD13-202ENST00000382671 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.02
PSMD13-202ENST00000382671 PTF1AQ7RTS3 328 aa21.39■■□□□ 1.02
PSMD13-202ENST00000382671 PLEKHG2Q9H7P9 1386 aa21.39■■□□□ 1.02
PSMD13-202ENST00000382671 IL13P35225 146 aa21.39■■□□□ 1.01
PSMD13-202ENST00000382671 NUP188Q5SRE5 1749 aa21.38■■□□□ 1.01
PSMD13-202ENST00000382671 PCDH11XQ9BZA7 1347 aa21.38■■□□□ 1.01
PSMD13-202ENST00000382671 PCDH11YQ9BZA8 1340 aa21.38■■□□□ 1.01
PSMD13-202ENST00000382671 PLSCR1O15162 318 aa21.38■■□□□ 1.01
PSMD13-202ENST00000382671 ACSBG1Q96GR2 724 aa21.38■■□□□ 1.01
PSMD13-202ENST00000382671 KCNQ2O43526 872 aa21.37■■□□□ 1.01
PSMD13-202ENST00000382671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.37■■□□□ 1.011e-6■■■□□ 16.8
PSMD13-202ENST00000382671 SPG7Q9UQ90 795 aa21.35■■□□□ 1.01
PSMD13-202ENST00000382671 ITGB4P16144 1822 aa21.35■■□□□ 1.01
PSMD13-202ENST00000382671 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
PSMD13-202ENST00000382671 CYP27B1O15528 508 aa21.34■■□□□ 1.01
PSMD13-202ENST00000382671 KDRP35968 1356 aa21.34■■□□□ 1.01
PSMD13-202ENST00000382671 TOGARAM1Q9Y4F4 1720 aa21.33■■□□□ 1
PSMD13-202ENST00000382671 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
PSMD13-202ENST00000382671 DDX10Q13206 875 aaKnown RBP21.32■■□□□ 1
PSMD13-202ENST00000382671 AEBP1Q8IUX7 1158 aa21.32■■□□□ 1
PSMD13-202ENST00000382671 PPP2R1AP30153 589 aa21.31■■□□□ 1
PSMD13-202ENST00000382671 SULT6B1Q6IMI4 303 aa21.31■■□□□ 1
PSMD13-202ENST00000382671 PRIM1P49642 420 aaKnown RBP21.3■■□□□ 1
PSMD13-202ENST00000382671 NKX1-1Q15270 411 aaPredicted RBP21.3■■□□□ 1
PSMD13-202ENST00000382671 LY75O60449 1722 aa21.28■■□□□ 1
PSMD13-202ENST00000382671 AMOTQ4VCS5 1084 aa21.27■■□□□ 1
PSMD13-202ENST00000382671 PLEKHO1Q53GL0 409 aaPredicted RBP21.27■■□□□ 1
PSMD13-202ENST00000382671 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
PSMD13-202ENST00000382671 PROM2Q8N271 834 aa21.27■■□□□ 1
PSMD13-202ENST00000382671 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
PSMD13-202ENST00000382671 CFAP53Q96M91 514 aa21.27■■□□□ 1
PSMD13-202ENST00000382671 PHKG2P15735 406 aa21.26■□□□□ 0.99
PSMD13-202ENST00000382671 VIRMAQ69YN4 1812 aaKnown RBP21.26■□□□□ 0.99
PSMD13-202ENST00000382671 TXNRD1Q16881 649 aa21.25■□□□□ 0.99
PSMD13-202ENST00000382671 HMOX1P09601 288 aa21.24■□□□□ 0.99
PSMD13-202ENST00000382671 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
PSMD13-202ENST00000382671 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
PSMD13-202ENST00000382671 SCN11AQ9UI33 1791 aa21.22■□□□□ 0.99
PSMD13-202ENST00000382671 U2SURPO15042 1029 aaKnown RBP21.21■□□□□ 0.99
PSMD13-202ENST00000382671 HSP90AB1P08238 724 aaKnown RBP21.21■□□□□ 0.99
PSMD13-202ENST00000382671 RALBP1Q15311 655 aa21.21■□□□□ 0.99
PSMD13-202ENST00000382671 PSDA5PKW4 1024 aaPredicted RBP21.2■□□□□ 0.98
PSMD13-202ENST00000382671 R3HDM1Q15032 1099 aaKnown RBP21.2■□□□□ 0.98
PSMD13-202ENST00000382671 PAPPAQ13219 1627 aa21.2■□□□□ 0.98
PSMD13-202ENST00000382671 MPRIPQ6WCQ1 1025 aa21.2■□□□□ 0.98
PSMD13-202ENST00000382671 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
PSMD13-202ENST00000382671 C1orf141Q5JVX7 400 aa21.19■□□□□ 0.98
PSMD13-202ENST00000382671 DCAF5Q96JK2 942 aa21.19■□□□□ 0.98
PSMD13-202ENST00000382671 SLC27A3Q5K4L6 730 aa21.18■□□□□ 0.98
PSMD13-202ENST00000382671 TAF1LQ8IZX4 1826 aa21.17■□□□□ 0.98
PSMD13-202ENST00000382671 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
PSMD13-202ENST00000382671 PIGBQ92521 554 aa21.17■□□□□ 0.98
PSMD13-202ENST00000382671 ANO8Q9HCE9 1232 aaPredicted RBP21.17■□□□□ 0.98
PSMD13-202ENST00000382671 KDM6AO15550 1401 aaPredicted RBP21.17■□□□□ 0.98
PSMD13-202ENST00000382671 ERVV-2B6SEH9 535 aa21.16■□□□□ 0.98
PSMD13-202ENST00000382671 LRRC4BQ9NT99 713 aa21.16■□□□□ 0.98
PSMD13-202ENST00000382671 TMOD3Q9NYL9 352 aa21.16■□□□□ 0.98
PSMD13-202ENST00000382671 AKAP4Q5JQC9 854 aa21.15■□□□□ 0.98
PSMD13-202ENST00000382671 ADAMTS7Q9UKP4 1686 aa21.15■□□□□ 0.98
PSMD13-202ENST00000382671 SMARCC1Q92922 1105 aaPredicted RBP21.14■□□□□ 0.98
PSMD13-202ENST00000382671 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
PSMD13-202ENST00000382671 PALLDQ8WX93 1383 aa21.14■□□□□ 0.97
PSMD13-202ENST00000382671 MTHFSDQ2M296 383 aaKnown RBP21.13■□□□□ 0.97
PSMD13-202ENST00000382671 RSPH6AQ9H0K4 717 aa21.13■□□□□ 0.97
PSMD13-202ENST00000382671 STK32BQ9NY57 414 aa21.13■□□□□ 0.97
PSMD13-202ENST00000382671 C5P01031 1676 aa21.13■□□□□ 0.97
PSMD13-202ENST00000382671 CASZ1Q86V15 1759 aa21.13■□□□□ 0.97
PSMD13-202ENST00000382671 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
PSMD13-202ENST00000382671 LRP5O75197 1615 aa21.13■□□□□ 0.97
PSMD13-202ENST00000382671 U2AF1L5P0DN76 240 aaPredicted RBP21.13■□□□□ 0.97
PSMD13-202ENST00000382671 U2AF1Q01081 240 aaKnown RBP eCLIP21.13■□□□□ 0.97
PSMD13-202ENST00000382671 TUBGCP6Q96RT7 1819 aa21.12■□□□□ 0.97
PSMD13-202ENST00000382671 SLC15A2Q16348 729 aa21.12■□□□□ 0.97
PSMD13-202ENST00000382671 CCNL1Q9UK58 526 aaPredicted RBP21.12■□□□□ 0.97
PSMD13-202ENST00000382671 FCHSD2O94868 740 aa21.11■□□□□ 0.97
PSMD13-202ENST00000382671 PRKAR2BP31323 418 aa21.11■□□□□ 0.97
PSMD13-202ENST00000382671 KCNQ4P56696 695 aa21.09■□□□□ 0.97
PSMD13-202ENST00000382671 CABP4P57796 275 aa21.09■□□□□ 0.97
PSMD13-202ENST00000382671 GAS2L2Q8NHY3 880 aa21.09■□□□□ 0.97
PSMD13-202ENST00000382671 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
PSMD13-202ENST00000382671 ASAP1Q9ULH1 1129 aa21.09■□□□□ 0.97
PSMD13-202ENST00000382671 ZNF831Q5JPB2 1677 aa21.09■□□□□ 0.97
PSMD13-202ENST00000382671 SRCAPQ6ZRS2 3230 aa21.08■□□□□ 0.96
PSMD13-202ENST00000382671 MRC1P22897 1456 aa21.08■□□□□ 0.96
PSMD13-202ENST00000382671 HMGB2P26583 209 aaKnown RBP21.07■□□□□ 0.96
PSMD13-202ENST00000382671 AKT1S1Q96B36 256 aa21.07■□□□□ 0.96
PSMD13-202ENST00000382671 PHACTR3Q96KR7 559 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms