RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 TPM3P06753 285 aa25.22■■□□□ 1.63
NKX3-2-201ENST00000382438 ZNF397Q8NF99 534 aaPredicted RBP25.22■■□□□ 1.63
NKX3-2-201ENST00000382438 FBXO38Q6PIJ6 1188 aa25.22■■□□□ 1.63
NKX3-2-201ENST00000382438 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
NKX3-2-201ENST00000382438 KDM5AP29375 1690 aaKnown RBP25.21■■□□□ 1.63
NKX3-2-201ENST00000382438 ZNF215Q9UL58 517 aaPredicted RBP25.21■■□□□ 1.63
NKX3-2-201ENST00000382438 CEP152O94986 1710 aa25.21■■□□□ 1.63
NKX3-2-201ENST00000382438 NOL10Q9BSC4 688 aaKnown RBP25.21■■□□□ 1.63
NKX3-2-201ENST00000382438 PLEKHD1A6NEE1 506 aa25.2■■□□□ 1.62
NKX3-2-201ENST00000382438 TPD52L1Q16890 204 aaPredicted RBP25.2■■□□□ 1.62
NKX3-2-201ENST00000382438 CASC1Q6TDU7 716 aa25.2■■□□□ 1.62
NKX3-2-201ENST00000382438 DRC7Q8IY82 874 aa25.2■■□□□ 1.62
NKX3-2-201ENST00000382438 ERVK-7P63135 1459 aa25.2■■□□□ 1.62
NKX3-2-201ENST00000382438 GTF3C6Q969F1 213 aa25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 ABCC11Q96J66 1382 aa25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 ELL2O00472 640 aaPredicted RBP25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 CHRM1P11229 460 aaPredicted RBP25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 CYP2C19P33261 490 aa25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 MLECQ14165 292 aa25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 CFAP70Q5T0N1 1121 aa25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 SRCIN1Q9C0H9 1055 aa25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 CD109Q6YHK3 1445 aa25.19■■□□□ 1.62
NKX3-2-201ENST00000382438 REC8O95072 547 aa25.18■■□□□ 1.62
NKX3-2-201ENST00000382438 ELF2Q15723 593 aa25.18■■□□□ 1.62
NKX3-2-201ENST00000382438 FUCA2Q9BTY2 467 aa25.18■■□□□ 1.62
NKX3-2-201ENST00000382438 RSPH14Q9UHP6 348 aa25.18■■□□□ 1.62
NKX3-2-201ENST00000382438 ZNF518AQ6AHZ1 1483 aa25.18■■□□□ 1.62
NKX3-2-201ENST00000382438 TSPYL1Q9H0U9 437 aa25.18■■□□□ 1.62
NKX3-2-201ENST00000382438 PAXBP1Q9Y5B6 917 aa25.18■■□□□ 1.62
NKX3-2-201ENST00000382438 FIBPO43427 364 aa25.17■■□□□ 1.62
NKX3-2-201ENST00000382438 CUL4AQ13619 759 aa25.17■■□□□ 1.62
NKX3-2-201ENST00000382438 FAM53CQ9NYF3 392 aa25.17■■□□□ 1.62
NKX3-2-201ENST00000382438 KIAA0556O60303 1618 aa25.16■■□□□ 1.62
NKX3-2-201ENST00000382438 CFAP44Q96MT7 982 aa25.16■■□□□ 1.62
NKX3-2-201ENST00000382438 PALD1Q9ULE6 856 aa25.16■■□□□ 1.62
NKX3-2-201ENST00000382438 ERC2O15083 957 aa25.15■■□□□ 1.62
NKX3-2-201ENST00000382438 MADDQ8WXG6 1647 aa25.15■■□□□ 1.62
NKX3-2-201ENST00000382438 DTNBO60941 627 aa25.15■■□□□ 1.62
NKX3-2-201ENST00000382438 UPF3BQ9BZI7 483 aaKnown RBP25.15■■□□□ 1.62
NKX3-2-201ENST00000382438 ZNF446Q9NWS9 450 aa25.15■■□□□ 1.62
NKX3-2-201ENST00000382438 CEP135Q66GS9 1140 aa25.14■■□□□ 1.62
NKX3-2-201ENST00000382438 TARBP1Q13395 1621 aaKnown RBP25.14■■□□□ 1.62
NKX3-2-201ENST00000382438 ALDH1L2Q3SY69 923 aa25.13■■□□□ 1.61
NKX3-2-201ENST00000382438 NEK11Q8NG66 645 aa25.13■■□□□ 1.61
NKX3-2-201ENST00000382438 LUZP1Q86V48 1076 aa25.13■■□□□ 1.61
NKX3-2-201ENST00000382438 WDR33Q9C0J8 1336 aaKnown RBP25.13■■□□□ 1.61
NKX3-2-201ENST00000382438 PLEKHF1Q96S99 279 aa25.12■■□□□ 1.61
NKX3-2-201ENST00000382438 UBE2HP62256 183 aa25.12■■□□□ 1.61
NKX3-2-201ENST00000382438 ZSCAN25Q6NSZ9 544 aa25.11■■□□□ 1.61
NKX3-2-201ENST00000382438 KIF1BPQ96EK5 621 aa25.11■■□□□ 1.61
NKX3-2-201ENST00000382438 DCTPP1Q9H773 170 aa25.11■■□□□ 1.61
NKX3-2-201ENST00000382438 CHMP3Q9Y3E7 222 aa25.11■■□□□ 1.61
NKX3-2-201ENST00000382438 MED14O60244 1454 aa25.1■■□□□ 1.61
NKX3-2-201ENST00000382438 USP27XA6NNY8 438 aa25.1■■□□□ 1.61
NKX3-2-201ENST00000382438 GYS2P54840 703 aa25.1■■□□□ 1.61
NKX3-2-201ENST00000382438 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.1■■□□□ 1.61
NKX3-2-201ENST00000382438 INTS4Q96HW7 963 aaKnown RBP25.09■■□□□ 1.61
NKX3-2-201ENST00000382438 TRIM66O15016 1216 aa25.09■■□□□ 1.61
NKX3-2-201ENST00000382438 TSPYL6Q8N831 410 aa25.09■■□□□ 1.61
NKX3-2-201ENST00000382438 NFATC2IPQ8NCF5 419 aa25.09■■□□□ 1.61
NKX3-2-201ENST00000382438 C10orf67Q8IYJ2 551 aa25.08■■□□□ 1.61
NKX3-2-201ENST00000382438 CLTCL1P53675 1640 aa25.08■■□□□ 1.61
NKX3-2-201ENST00000382438 SOX12O15370 315 aa25.08■■□□□ 1.61
NKX3-2-201ENST00000382438 MRPL50Q8N5N7 158 aaKnown RBP25.08■■□□□ 1.61
NKX3-2-201ENST00000382438 CACTINQ8WUQ7 758 aaKnown RBP25.08■■□□□ 1.61
NKX3-2-201ENST00000382438 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.08■■□□□ 1.61
NKX3-2-201ENST00000382438 LOC102724159A0A0B4J2E5 919 aa25.08■■□□□ 1.6
NKX3-2-201ENST00000382438 POLR3GO15318 223 aaPredicted RBP25.08■■□□□ 1.6
NKX3-2-201ENST00000382438 MCM2P49736 904 aa25.08■■□□□ 1.6
NKX3-2-201ENST00000382438 PWP2Q15269 919 aaKnown RBP25.08■■□□□ 1.6
NKX3-2-201ENST00000382438 LARP6Q9BRS8 491 aaKnown RBP25.08■■□□□ 1.6
NKX3-2-201ENST00000382438 NCBP3Q53F19 620 aaKnown RBP25.07■■□□□ 1.6
NKX3-2-201ENST00000382438 TMEM87AQ8NBN3 555 aa25.07■■□□□ 1.6
NKX3-2-201ENST00000382438 SYT10Q6XYQ8 523 aa25.07■■□□□ 1.6
NKX3-2-201ENST00000382438 TRIM5Q9C035 493 aa25.07■■□□□ 1.6
NKX3-2-201ENST00000382438 CAMK4Q16566 473 aa25.06■■□□□ 1.6
NKX3-2-201ENST00000382438 RASSF4Q9H2L5 321 aa25.06■■□□□ 1.6
NKX3-2-201ENST00000382438 EFCC1Q9HA90 598 aa25.06■■□□□ 1.6
NKX3-2-201ENST00000382438 CCDC192P0DO97 292 aa25.05■■□□□ 1.6
NKX3-2-201ENST00000382438 LCMT1Q9UIC8 334 aa25.05■■□□□ 1.6
NKX3-2-201ENST00000382438 RPAP1Q9BWH6 1393 aaPredicted RBP25.05■■□□□ 1.6
NKX3-2-201ENST00000382438 TSHZ3Q63HK5 1081 aa25.04■■□□□ 1.6
NKX3-2-201ENST00000382438 TRMT1Q9NXH9 659 aaKnown RBP25.04■■□□□ 1.6
NKX3-2-201ENST00000382438 DHX16O60231 1041 aaKnown RBP25.04■■□□□ 1.6
NKX3-2-201ENST00000382438 NOP2P46087 812 aaKnown RBP25.04■■□□□ 1.6
NKX3-2-201ENST00000382438 KRBA2Q6ZNG9 492 aa25.04■■□□□ 1.6
NKX3-2-201ENST00000382438 THUMPD2Q9BTF0 503 aaKnown RBP25.04■■□□□ 1.6
NKX3-2-201ENST00000382438 BMS1Q14692 1282 aaKnown RBP25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 ARID5BQ14865 1188 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 KLHL34Q8N239 644 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 FAM200AQ8TCP9 573 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 PTPRTO14522 1441 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 IL16Q14005 1332 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 VAMP4O75379 141 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 CCDC144BQ3MJ40 725 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 CCDC144CPQ8IYA2 1237 aa25.03■■□□□ 1.6
NKX3-2-201ENST00000382438 TTC37Q6PGP7 1564 aa25.02■■□□□ 1.6
NKX3-2-201ENST00000382438 ERBB3P21860 1342 aa25.02■■□□□ 1.6
NKX3-2-201ENST00000382438 ZSCAN22P10073 491 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms