RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 USP48Q86UV5 1035 aa18.17■□□□□ 0.5
CTNS-202ENST00000381870 PYCARDQ9ULZ3 195 aa18.17■□□□□ 0.5
CTNS-202ENST00000381870 SPAG9O60271 1321 aaKnown RBP18.17■□□□□ 0.5
CTNS-202ENST00000381870 REC8O95072 547 aa18.16■□□□□ 0.5
CTNS-202ENST00000381870 AFAP1Q8N556 730 aa18.16■□□□□ 0.5
CTNS-202ENST00000381870 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
CTNS-202ENST00000381870 NRXN1Q9ULB1 1477 aa18.16■□□□□ 0.5
CTNS-202ENST00000381870 KNDC1Q76NI1 1749 aa18.16■□□□□ 0.5
CTNS-202ENST00000381870 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
CTNS-202ENST00000381870 TRHP20396 242 aaPredicted RBP18.15■□□□□ 0.5
CTNS-202ENST00000381870 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 CABP2Q9NPB3 220 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 ERC2O15083 957 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 ZBTB22O15209 634 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 ZNF771Q7L3S4 317 aaPredicted RBP18.15■□□□□ 0.5
CTNS-202ENST00000381870 KIAA1524Q8TCG1 905 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
CTNS-202ENST00000381870 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.5
CTNS-202ENST00000381870 IFT172Q9UG01 1749 aa18.14■□□□□ 0.5
CTNS-202ENST00000381870 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
CTNS-202ENST00000381870 DIAPH3Q9NSV4 1193 aa18.14■□□□□ 0.49
CTNS-202ENST00000381870 CTIFO43310 598 aaKnown RBP18.13■□□□□ 0.49
CTNS-202ENST00000381870 KDM4AO75164 1064 aa18.13■□□□□ 0.49
CTNS-202ENST00000381870 CUL4AQ13619 759 aa18.13■□□□□ 0.49
CTNS-202ENST00000381870 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
CTNS-202ENST00000381870 PLCH2O75038 1416 aa18.13■□□□□ 0.49
CTNS-202ENST00000381870 CHAF1AQ13111 956 aaPredicted RBP18.13■□□□□ 0.49
CTNS-202ENST00000381870 AP5Z1O43299 807 aa18.12■□□□□ 0.49
CTNS-202ENST00000381870 DEPDC5O75140 1603 aa18.12■□□□□ 0.49
CTNS-202ENST00000381870 SETBP1Q9Y6X0 1596 aa18.12■□□□□ 0.49
CTNS-202ENST00000381870 KIF3BO15066 747 aa18.12■□□□□ 0.49
CTNS-202ENST00000381870 CCDC183Q5T5S1 534 aa18.12■□□□□ 0.49
CTNS-202ENST00000381870 KIF1BO60333 1816 aa18.11■□□□□ 0.49
CTNS-202ENST00000381870 C14orf93Q9H972 538 aaKnown RBP18.11■□□□□ 0.49
CTNS-202ENST00000381870 ABCC1P33527 1531 aa18.11■□□□□ 0.49
CTNS-202ENST00000381870 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
CTNS-202ENST00000381870 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
CTNS-202ENST00000381870 PALD1Q9ULE6 856 aa18.11■□□□□ 0.49
CTNS-202ENST00000381870 SPC24Q8NBT2 197 aa18.1■□□□□ 0.49
CTNS-202ENST00000381870 FEZ1Q99689 392 aa18.1■□□□□ 0.49
CTNS-202ENST00000381870 OGFRQ9NZT2 677 aa18.1■□□□□ 0.49
CTNS-202ENST00000381870 A0A1W2PP64 1363 aa18.1■□□□□ 0.49
CTNS-202ENST00000381870 VGLL3A8MV65 326 aa18.1■□□□□ 0.49
CTNS-202ENST00000381870 NCBP1Q09161 790 aaKnown RBP18.1■□□□□ 0.49
CTNS-202ENST00000381870 MBIPQ9NS73 344 aa18.1■□□□□ 0.49
CTNS-202ENST00000381870 TULP4Q9NRJ4 1543 aa18.09■□□□□ 0.49
CTNS-202ENST00000381870 TAF3Q5VWG9 929 aa18.09■□□□□ 0.49
CTNS-202ENST00000381870 ANKRD44Q8N8A2 993 aa18.09■□□□□ 0.49
CTNS-202ENST00000381870 NAP1L2Q9ULW6 460 aaPredicted RBP18.09■□□□□ 0.49
CTNS-202ENST00000381870 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
CTNS-202ENST00000381870 MX1P20591 662 aa18.09■□□□□ 0.49
CTNS-202ENST00000381870 MCM2P49736 904 aa18.09■□□□□ 0.49
CTNS-202ENST00000381870 SAFB2Q14151 953 aaKnown RBP eCLIP18.09■□□□□ 0.49
CTNS-202ENST00000381870 TWISTNBQ3B726 338 aaPredicted RBP18.09■□□□□ 0.49
CTNS-202ENST00000381870 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
CTNS-202ENST00000381870 API5Q9BZZ5 524 aaKnown RBP18.09■□□□□ 0.49
CTNS-202ENST00000381870 C8orf58Q8NAV2 365 aa18.08■□□□□ 0.49
CTNS-202ENST00000381870 INTS4Q96HW7 963 aaKnown RBP18.08■□□□□ 0.49
CTNS-202ENST00000381870 CNPY2Q9Y2B0 182 aa18.08■□□□□ 0.49
CTNS-202ENST00000381870 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.48
CTNS-202ENST00000381870 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.48
CTNS-202ENST00000381870 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
CTNS-202ENST00000381870 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 FYB1O15117 783 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 RAPGEF3O95398 923 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 CEP85Q6P2H3 762 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 SRCIN1Q9C0H9 1055 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 FCHSD2O94868 740 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 CTNNA3Q9UI47 895 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 FANCAO15360 1455 aa18.07■□□□□ 0.48
CTNS-202ENST00000381870 TCHHQ07283 1943 aa18.06■□□□□ 0.48
CTNS-202ENST00000381870 GIMAP6Q6P9H5 292 aa18.06■□□□□ 0.48
CTNS-202ENST00000381870 UPF3BQ9BZI7 483 aaKnown RBP18.06■□□□□ 0.48
CTNS-202ENST00000381870 BCL11BQ9C0K0 894 aaPredicted RBP18.06■□□□□ 0.48
CTNS-202ENST00000381870 WDR33Q9C0J8 1336 aaKnown RBP18.05■□□□□ 0.48
CTNS-202ENST00000381870 NAA30Q147X3 362 aaPredicted RBP18.05■□□□□ 0.48
CTNS-202ENST00000381870 HMOX1P09601 288 aa18.05■□□□□ 0.48
CTNS-202ENST00000381870 SLFN14P0C7P3 912 aa18.05■□□□□ 0.48
CTNS-202ENST00000381870 GNAI1P63096 354 aa18.05■□□□□ 0.48
CTNS-202ENST00000381870 TSHZ3Q63HK5 1081 aa18.05■□□□□ 0.48
CTNS-202ENST00000381870 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
CTNS-202ENST00000381870 FBLN1P23142 703 aa18.04■□□□□ 0.48
CTNS-202ENST00000381870 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
CTNS-202ENST00000381870 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
CTNS-202ENST00000381870 TMEM87AQ8NBN3 555 aa18.04■□□□□ 0.48
CTNS-202ENST00000381870 FUCA2Q9BTY2 467 aa18.04■□□□□ 0.48
CTNS-202ENST00000381870 IFT57Q9NWB7 429 aa18.04■□□□□ 0.48
CTNS-202ENST00000381870 FAM135BQ49AJ0 1406 aa18.04■□□□□ 0.48
CTNS-202ENST00000381870 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
CTNS-202ENST00000381870 RPAP1Q9BWH6 1393 aaPredicted RBP18.03■□□□□ 0.48
CTNS-202ENST00000381870 GABPB1Q06547 395 aaPredicted RBP18.03■□□□□ 0.48
CTNS-202ENST00000381870 RPAP2Q8IXW5 612 aaPredicted RBP18.03■□□□□ 0.48
CTNS-202ENST00000381870 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
CTNS-202ENST00000381870 ABCA9Q8IUA7 1624 aa18.03■□□□□ 0.48
CTNS-202ENST00000381870 ZNF853P0CG23 659 aa18.03■□□□□ 0.48
CTNS-202ENST00000381870 ESYT1Q9BSJ8 1104 aa18.03■□□□□ 0.48
CTNS-202ENST00000381870 PNPLA6Q8IY17 1366 aa18.02■□□□□ 0.48
CTNS-202ENST00000381870 ARHGEF40Q8TER5 1519 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms