RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
RPAIN-202ENST00000381208 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
RPAIN-202ENST00000381208 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
RPAIN-202ENST00000381208 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.47
RPAIN-202ENST00000381208 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.47
RPAIN-202ENST00000381208 NHSQ6T4R5 1651 aa18.01■□□□□ 0.47
RPAIN-202ENST00000381208 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
RPAIN-202ENST00000381208 SLC15A2Q16348 729 aa18■□□□□ 0.47
RPAIN-202ENST00000381208 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
RPAIN-202ENST00000381208 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
RPAIN-202ENST00000381208 FBLN1P23142 703 aa17.99■□□□□ 0.47
RPAIN-202ENST00000381208 INSRP06213 1382 aa17.99■□□□□ 0.47
RPAIN-202ENST00000381208 FLT4P35916 1363 aa17.99■□□□□ 0.47
RPAIN-202ENST00000381208 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-202ENST00000381208 RAPGEF4Q8WZA2 1011 aa17.98■□□□□ 0.47
RPAIN-202ENST00000381208 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
RPAIN-202ENST00000381208 CARD14Q9BXL6 1004 aa17.97■□□□□ 0.47
RPAIN-202ENST00000381208 NSD3Q9BZ95 1437 aa17.97■□□□□ 0.47
RPAIN-202ENST00000381208 KAT6BQ8WYB5 2073 aa17.96■□□□□ 0.47
RPAIN-202ENST00000381208 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
RPAIN-202ENST00000381208 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
RPAIN-202ENST00000381208 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
RPAIN-202ENST00000381208 NBPF6Q5VWK0 638 aa17.95■□□□□ 0.46
RPAIN-202ENST00000381208 NBPF4Q96M43 638 aa17.95■□□□□ 0.46
RPAIN-202ENST00000381208 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
RPAIN-202ENST00000381208 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-202ENST00000381208 MTFR1LQ9H019 292 aa17.93■□□□□ 0.46
RPAIN-202ENST00000381208 KIF20BQ96Q89 1820 aa17.93■□□□□ 0.46
RPAIN-202ENST00000381208 SYTL4Q96C24 671 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-202ENST00000381208 MEGF6O75095 1541 aa17.92■□□□□ 0.46
RPAIN-202ENST00000381208 CASZ1Q86V15 1759 aa17.92■□□□□ 0.46
RPAIN-202ENST00000381208 ZBTB7AO95365 584 aa17.91■□□□□ 0.46
RPAIN-202ENST00000381208 PRIM1P49642 420 aaKnown RBP17.91■□□□□ 0.46
RPAIN-202ENST00000381208 BTAF1O14981 1849 aa17.91■□□□□ 0.46
RPAIN-202ENST00000381208 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
RPAIN-202ENST00000381208 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
RPAIN-202ENST00000381208 MYOM1P52179 1685 aa17.9■□□□□ 0.46
RPAIN-202ENST00000381208 SLC16A10Q8TF71 515 aa17.9■□□□□ 0.46
RPAIN-202ENST00000381208 WASHC2AQ641Q2 1341 aa17.89■□□□□ 0.45
RPAIN-202ENST00000381208 PTGER2P43116 358 aa17.89■□□□□ 0.45
RPAIN-202ENST00000381208 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
RPAIN-202ENST00000381208 POLR3GLQ9BT43 218 aa17.89■□□□□ 0.45
RPAIN-202ENST00000381208 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
RPAIN-202ENST00000381208 LRRC4BQ9NT99 713 aa17.89■□□□□ 0.45
RPAIN-202ENST00000381208 EMILIN1Q9Y6C2 1016 aa17.89■□□□□ 0.45
RPAIN-202ENST00000381208 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-202ENST00000381208 NSD2O96028 1365 aa17.88■□□□□ 0.45
RPAIN-202ENST00000381208 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
RPAIN-202ENST00000381208 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-202ENST00000381208 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
RPAIN-202ENST00000381208 AKT1S1Q96B36 256 aa17.87■□□□□ 0.45
RPAIN-202ENST00000381208 RGPD2P0DJD1 1756 aa17.85■□□□□ 0.45
RPAIN-202ENST00000381208 PLEKHG2Q9H7P9 1386 aa17.85■□□□□ 0.45
RPAIN-202ENST00000381208 ZNF827Q17R98 1081 aa17.85■□□□□ 0.45
RPAIN-202ENST00000381208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.85■□□□□ 0.452e-8■□□□□ 9.4
RPAIN-202ENST00000381208 SPG7Q9UQ90 795 aa17.85■□□□□ 0.45
RPAIN-202ENST00000381208 NCAPD2Q15021 1401 aa17.85■□□□□ 0.45
RPAIN-202ENST00000381208 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
RPAIN-202ENST00000381208 POLKQ9UBT6 870 aa17.84■□□□□ 0.45
RPAIN-202ENST00000381208 CCNL1Q9UK58 526 aaPredicted RBP17.84■□□□□ 0.45
RPAIN-202ENST00000381208 TFCP2L1Q9NZI6 479 aa17.83■□□□□ 0.45
RPAIN-202ENST00000381208 DOT1LQ8TEK3 1739 aa17.83■□□□□ 0.44
RPAIN-202ENST00000381208 SHANK3Q9BYB0 1731 aa17.83■□□□□ 0.44
RPAIN-202ENST00000381208 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-202ENST00000381208 ARXQ96QS3 562 aa17.82■□□□□ 0.44
RPAIN-202ENST00000381208 PANK3Q9H999 370 aa17.82■□□□□ 0.44
RPAIN-202ENST00000381208 CYP27B1O15528 508 aa17.81■□□□□ 0.44
RPAIN-202ENST00000381208 POLD1P28340 1107 aa17.81■□□□□ 0.44
RPAIN-202ENST00000381208 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
RPAIN-202ENST00000381208 EYA1Q99502 592 aa17.81■□□□□ 0.44
RPAIN-202ENST00000381208 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
RPAIN-202ENST00000381208 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
RPAIN-202ENST00000381208 ANKRD26Q9UPS8 1709 aa17.81■□□□□ 0.44
RPAIN-202ENST00000381208 YY1P25490 414 aa17.79■□□□□ 0.44
RPAIN-202ENST00000381208 FHDC1Q9C0D6 1143 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-202ENST00000381208 PNPLA7Q6ZV29 1317 aa17.79■□□□□ 0.44
RPAIN-202ENST00000381208 LY75O60449 1722 aa17.79■□□□□ 0.44
RPAIN-202ENST00000381208 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
RPAIN-202ENST00000381208 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
RPAIN-202ENST00000381208 FLAD1Q8NFF5 587 aa17.79■□□□□ 0.44
RPAIN-202ENST00000381208 MAP2P11137 1827 aaKnown RBP17.78■□□□□ 0.44
RPAIN-202ENST00000381208 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
RPAIN-202ENST00000381208 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
RPAIN-202ENST00000381208 PALLDQ8WX93 1383 aa17.77■□□□□ 0.44
RPAIN-202ENST00000381208 TNNT2P45379 298 aaPredicted RBP17.77■□□□□ 0.43
RPAIN-202ENST00000381208 EIF4A2Q14240 407 aaKnown RBP17.77■□□□□ 0.43
RPAIN-202ENST00000381208 PKD1L3Q7Z443 1732 aa17.76■□□□□ 0.43
RPAIN-202ENST00000381208 KCNQ4P56696 695 aa17.76■□□□□ 0.43
RPAIN-202ENST00000381208 MORC1Q86VD1 984 aa17.76■□□□□ 0.43
RPAIN-202ENST00000381208 HSP90AB1P08238 724 aaKnown RBP17.74■□□□□ 0.43
RPAIN-202ENST00000381208 PIGBQ92521 554 aa17.74■□□□□ 0.43
RPAIN-202ENST00000381208 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
RPAIN-202ENST00000381208 PHKG2P15735 406 aa17.73■□□□□ 0.43
RPAIN-202ENST00000381208 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
RPAIN-202ENST00000381208 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
RPAIN-202ENST00000381208 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
RPAIN-202ENST00000381208 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
RPAIN-202ENST00000381208 AK7Q96M32 723 aa17.7■□□□□ 0.42
RPAIN-202ENST00000381208 LOC102724428A0A0B4J2F2 783 aa17.69■□□□□ 0.42
RPAIN-202ENST00000381208 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms