RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ANKRD18AQ8IVF6 992 aa12.63□□□□□ -0.39
CLCN4-202ENST00000380833 FANCD2Q9BXW9 1451 aa12.63□□□□□ -0.39
CLCN4-202ENST00000380833 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.63□□□□□ -0.39
CLCN4-202ENST00000380833 PTPRGP23470 1445 aa12.63□□□□□ -0.39
CLCN4-202ENST00000380833 SMARCE1Q969G3 411 aa12.62□□□□□ -0.39
CLCN4-202ENST00000380833 OGFRQ9NZT2 677 aa12.62□□□□□ -0.39
CLCN4-202ENST00000380833 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
CLCN4-202ENST00000380833 XBP1P17861 261 aa12.62□□□□□ -0.39
CLCN4-202ENST00000380833 MCM3P25205 808 aa12.62□□□□□ -0.39
CLCN4-202ENST00000380833 MAP2K1Q02750 393 aaPredicted RBP12.62□□□□□ -0.39
CLCN4-202ENST00000380833 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
CLCN4-202ENST00000380833 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
CLCN4-202ENST00000380833 REC8O95072 547 aa12.62□□□□□ -0.39
CLCN4-202ENST00000380833 ERC2O15083 957 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 HSPA4P34932 840 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 CFAP57Q96MR6 1250 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 KIF3CO14782 793 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 ZNF76P36508 570 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-202ENST00000380833 FEZ1Q99689 392 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 KIF18AQ8NI77 898 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 FAM184BQ9ULE4 1060 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 PTPN14Q15678 1187 aa12.61□□□□□ -0.39
CLCN4-202ENST00000380833 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
CLCN4-202ENST00000380833 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
CLCN4-202ENST00000380833 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-202ENST00000380833 ZC3H6P61129 1189 aaKnown RBP12.6□□□□□ -0.39
CLCN4-202ENST00000380833 MYBBP1AQ9BQG0 1328 aaKnown RBP12.6□□□□□ -0.39
CLCN4-202ENST00000380833 DBN1Q16643 649 aa12.6□□□□□ -0.39
CLCN4-202ENST00000380833 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-202ENST00000380833 CLNS1AP54105 237 aaKnown RBP12.6□□□□□ -0.39
CLCN4-202ENST00000380833 CCDC192P0DO97 292 aa12.6□□□□□ -0.39
CLCN4-202ENST00000380833 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
CLCN4-202ENST00000380833 MPHOSPH8Q99549 860 aa12.6□□□□□ -0.39
CLCN4-202ENST00000380833 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
CLCN4-202ENST00000380833 KIF5BP33176 963 aa12.59□□□□□ -0.39
CLCN4-202ENST00000380833 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
CLCN4-202ENST00000380833 KIF15Q9NS87 1388 aa12.59□□□□□ -0.39
CLCN4-202ENST00000380833 HMGB1P1B2RPK0 211 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-202ENST00000380833 TAX1BP1Q86VP1 789 aa12.59□□□□□ -0.39
CLCN4-202ENST00000380833 RBBP5Q15291 538 aaKnown RBP12.58□□□□□ -0.39
CLCN4-202ENST00000380833 CERS3Q8IU89 383 aa12.58□□□□□ -0.39
CLCN4-202ENST00000380833 ZMAT2Q96NC0 199 aaKnown RBP12.58□□□□□ -0.39
CLCN4-202ENST00000380833 RAI14Q9P0K7 980 aa12.58□□□□□ -0.39
CLCN4-202ENST00000380833 PHLDB1Q86UU1 1377 aa12.58□□□□□ -0.4
CLCN4-202ENST00000380833 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
CLCN4-202ENST00000380833 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
CLCN4-202ENST00000380833 GPRASP1Q5JY77 1395 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
CLCN4-202ENST00000380833 SEPT7Q16181 437 aaKnown RBP12.57□□□□□ -0.4
CLCN4-202ENST00000380833 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 JAKMIP3Q5VZ66 844 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 INTS3Q68E01 1043 aaKnown RBP12.57□□□□□ -0.4
CLCN4-202ENST00000380833 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
CLCN4-202ENST00000380833 DDX19BQ9UMR2 479 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 BACH2Q9BYV9 841 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 WASHC2AQ641Q2 1341 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 CNTROBQ8N137 903 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 PPM1EQ8WY54 764 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 API5Q9BZZ5 524 aaKnown RBP12.57□□□□□ -0.4
CLCN4-202ENST00000380833 ABCF2Q9UG63 623 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 PAXBP1Q9Y5B6 917 aa12.57□□□□□ -0.4
CLCN4-202ENST00000380833 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
CLCN4-202ENST00000380833 CCDC181Q5TID7 509 aa12.56□□□□□ -0.4
CLCN4-202ENST00000380833 PIK3R5Q8WYR1 880 aa12.56□□□□□ -0.4
CLCN4-202ENST00000380833 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
CLCN4-202ENST00000380833 HSP90AB4PQ58FF6 505 aa12.56□□□□□ -0.4
CLCN4-202ENST00000380833 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
CLCN4-202ENST00000380833 GNL3LQ9NVN8 582 aaKnown RBP12.56□□□□□ -0.4
CLCN4-202ENST00000380833 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
CLCN4-202ENST00000380833 MSL1Q68DK7 614 aa12.55□□□□□ -0.4
CLCN4-202ENST00000380833 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
CLCN4-202ENST00000380833 SPATS2LQ9NUQ6 558 aaKnown RBP12.55□□□□□ -0.4
CLCN4-202ENST00000380833 RPUSD2Q8IZ73 545 aaKnown RBP12.55□□□□□ -0.4
CLCN4-202ENST00000380833 FIBPO43427 364 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 GCKP35557 465 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-202ENST00000380833 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 CCDC175P0C221 793 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 SH3BGRP55822 239 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-202ENST00000380833 TXLNAP40222 546 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 MTHFSP49914 203 aa12.54□□□□□ -0.4
CLCN4-202ENST00000380833 UTP14CQ5TAP6 766 aaKnown RBP12.54□□□□□ -0.4
CLCN4-202ENST00000380833 IGSF3O75054 1194 aa12.53□□□□□ -0.4
CLCN4-202ENST00000380833 SPECC1LQ69YQ0 1117 aa12.53□□□□□ -0.4
CLCN4-202ENST00000380833 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
CLCN4-202ENST00000380833 POGZQ7Z3K3 1410 aa12.53□□□□□ -0.4
CLCN4-202ENST00000380833 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-202ENST00000380833 ANKIB1Q9P2G1 1089 aa12.53□□□□□ -0.4
CLCN4-202ENST00000380833 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
CLCN4-202ENST00000380833 FMN1Q68DA7 1419 aa12.53□□□□□ -0.4
CLCN4-202ENST00000380833 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms