RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 PCDH11XQ9BZA7 1347 aa8.23□□□□□ -1.09
FOCAD-202ENST00000380249 PCDH11YQ9BZA8 1340 aa8.23□□□□□ -1.09
FOCAD-202ENST00000380249 PRKAR2BP31323 418 aa8.23□□□□□ -1.09
FOCAD-202ENST00000380249 FAM208AQ9UK61 1670 aaKnown RBP8.23□□□□□ -1.09
FOCAD-202ENST00000380249 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.23□□□□□ -1.09
FOCAD-202ENST00000380249 CHMP4AQ9BY43 222 aa8.23□□□□□ -1.09
FOCAD-202ENST00000380249 BCL9O00512 1426 aa8.23□□□□□ -1.09
FOCAD-202ENST00000380249 DISP2A7MBM2 1401 aa8.22□□□□□ -1.09
FOCAD-202ENST00000380249 MARF1Q9Y4F3 1742 aaKnown RBP8.22□□□□□ -1.09
FOCAD-202ENST00000380249 MIER1Q8N108 512 aa8.22□□□□□ -1.09
FOCAD-202ENST00000380249 NEFLP07196 543 aa8.22□□□□□ -1.09
FOCAD-202ENST00000380249 NKX1-1Q15270 411 aaPredicted RBP8.22□□□□□ -1.09
FOCAD-202ENST00000380249 C1orf141Q5JVX7 400 aa8.22□□□□□ -1.09
FOCAD-202ENST00000380249 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
FOCAD-202ENST00000380249 ZNF530Q6P9A1 599 aaPredicted RBP8.22□□□□□ -1.09
FOCAD-202ENST00000380249 SEPT12Q8IYM1 358 aa8.22□□□□□ -1.09
FOCAD-202ENST00000380249 USP35Q9P2H5 1018 aa8.22□□□□□ -1.09
FOCAD-202ENST00000380249 DCAF5Q96JK2 942 aa8.21□□□□□ -1.09
FOCAD-202ENST00000380249 BABAM1Q9NWV8 329 aa8.21□□□□□ -1.09
FOCAD-202ENST00000380249 NFE2L2Q16236 605 aa8.21□□□□□ -1.1
FOCAD-202ENST00000380249 AKAP4Q5JQC9 854 aa8.21□□□□□ -1.1
FOCAD-202ENST00000380249 FAM196AQ6ZSG2 479 aa8.21□□□□□ -1.1
FOCAD-202ENST00000380249 ADAMTS8Q9UP79 889 aa8.21□□□□□ -1.1
FOCAD-202ENST00000380249 CCDC27Q2M243 656 aa8.21□□□□□ -1.1
FOCAD-202ENST00000380249 MAP2P11137 1827 aaKnown RBP8.21□□□□□ -1.1
FOCAD-202ENST00000380249 A0A0G2JS52 829 aa8.21□□□□□ -1.1
FOCAD-202ENST00000380249 TNS2Q63HR2 1409 aa8.2□□□□□ -1.1
FOCAD-202ENST00000380249 FAM98CQ17RN3 349 aaKnown RBP8.2□□□□□ -1.1
FOCAD-202ENST00000380249 RTF1Q92541 710 aaKnown RBP8.2□□□□□ -1.1
FOCAD-202ENST00000380249 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
FOCAD-202ENST00000380249 AEBP1Q8IUX7 1158 aa8.2□□□□□ -1.1
FOCAD-202ENST00000380249 KRT27Q7Z3Y8 459 aa8.2□□□□□ -1.1
FOCAD-202ENST00000380249 CCDC125Q86Z20 511 aa8.2□□□□□ -1.1
FOCAD-202ENST00000380249 HMOX1P09601 288 aa8.19□□□□□ -1.1
FOCAD-202ENST00000380249 RGS17Q9UGC6 210 aaPredicted RBP8.19□□□□□ -1.1
FOCAD-202ENST00000380249 POTEAQ6S8J7 498 aa8.19□□□□□ -1.1
FOCAD-202ENST00000380249 ERVV-2B6SEH9 535 aa8.19□□□□□ -1.1
FOCAD-202ENST00000380249 LTN1O94822 1766 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 PHKG2P15735 406 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 PEAK1Q9H792 1746 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 GNAT3A8MTJ3 354 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 TEFQ10587 303 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 TMPOP42166 694 aaKnown RBP8.18□□□□□ -1.1
FOCAD-202ENST00000380249 FAM9BQ8IZU0 186 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 SMARCC1Q92922 1105 aaPredicted RBP8.18□□□□□ -1.1
FOCAD-202ENST00000380249 PLEKHF1Q96S99 279 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 PLCH1Q4KWH8 1693 aa8.18□□□□□ -1.1
FOCAD-202ENST00000380249 CYP27B1O15528 508 aa8.17□□□□□ -1.1
FOCAD-202ENST00000380249 USHBP1Q8N6Y0 703 aa8.17□□□□□ -1.1
FOCAD-202ENST00000380249 MAP3K5Q99683 1374 aa8.17□□□□□ -1.1
FOCAD-202ENST00000380249 IL16Q14005 1332 aa8.17□□□□□ -1.1
FOCAD-202ENST00000380249 MEGF6O75095 1541 aa8.17□□□□□ -1.1
FOCAD-202ENST00000380249 NRAPQ86VF7 1730 aa8.17□□□□□ -1.1
FOCAD-202ENST00000380249 MTHFSDQ2M296 383 aaKnown RBP8.17□□□□□ -1.1
FOCAD-202ENST00000380249 APAF1O14727 1248 aa8.16□□□□□ -1.1
FOCAD-202ENST00000380249 PHACTR3Q96KR7 559 aa8.16□□□□□ -1.1
FOCAD-202ENST00000380249 RIPK4P57078 832 aa8.16□□□□□ -1.1
FOCAD-202ENST00000380249 WDR63Q8IWG1 891 aa8.16□□□□□ -1.1
FOCAD-202ENST00000380249 MARCH10Q8NA82 808 aaPredicted RBP8.16□□□□□ -1.1
FOCAD-202ENST00000380249 SOS1Q07889 1333 aaPredicted RBP8.16□□□□□ -1.1
FOCAD-202ENST00000380249 GLI3P10071 1580 aa8.16□□□□□ -1.1
FOCAD-202ENST00000380249 CCDC184Q52MB2 194 aa8.16□□□□□ -1.1
FOCAD-202ENST00000380249 GNAI1P63096 354 aa8.15□□□□□ -1.1
FOCAD-202ENST00000380249 DDX54Q8TDD1 881 aaKnown RBP8.15□□□□□ -1.1
FOCAD-202ENST00000380249 CEMIPQ8WUJ3 1361 aa8.15□□□□□ -1.1
FOCAD-202ENST00000380249 RGPD1P0DJD0 1748 aa8.15□□□□□ -1.1
FOCAD-202ENST00000380249 RNMTO43148 476 aaKnown RBP8.14□□□□□ -1.11
FOCAD-202ENST00000380249 SF3B2Q13435 895 aaKnown RBP8.13□□□□□ -1.11
FOCAD-202ENST00000380249 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
FOCAD-202ENST00000380249 TMOD3Q9NYL9 352 aa8.13□□□□□ -1.11
FOCAD-202ENST00000380249 TAF7Q15545 349 aaPredicted RBP8.13□□□□□ -1.11
FOCAD-202ENST00000380249 TEX13AQ9BXU3 409 aaPredicted RBP8.13□□□□□ -1.11
FOCAD-202ENST00000380249 MYH16Q9H6N6 1097 aa8.13□□□□□ -1.11
FOCAD-202ENST00000380249 HOXB7P09629 217 aa8.13□□□□□ -1.11
FOCAD-202ENST00000380249 BCL11BQ9C0K0 894 aaPredicted RBP8.13□□□□□ -1.11
FOCAD-202ENST00000380249 CABP4P57796 275 aa8.13□□□□□ -1.11
FOCAD-202ENST00000380249 VSIG10Q8N0Z9 540 aa8.13□□□□□ -1.11
FOCAD-202ENST00000380249 PLSCR1O15162 318 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 THSD7AQ9UPZ6 1657 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 RGS12O14924 1447 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 CFAP44Q96MT7 982 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 SLC52A2Q9HAB3 445 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 BAG6P46379 1132 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 IFT57Q9NWB7 429 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 ZBED9Q6R2W3 1325 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 GOLGA2Q08379 1002 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 TTC5Q8N0Z6 440 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 IL17REQ8NFR9 667 aa8.12□□□□□ -1.11
FOCAD-202ENST00000380249 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
FOCAD-202ENST00000380249 CT47B1P0C2W7 299 aaPredicted RBP8.12□□□□□ -1.11
FOCAD-202ENST00000380249 E9PSI1 815 aa8.11□□□□□ -1.11
FOCAD-202ENST00000380249 CHL1O00533 1208 aa8.11□□□□□ -1.11
FOCAD-202ENST00000380249 HNRNPUQ00839 825 aaKnown RBP eCLIP8.11□□□□□ -1.11
FOCAD-202ENST00000380249 WWC1Q8IX03 1113 aa8.11□□□□□ -1.11
FOCAD-202ENST00000380249 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
FOCAD-202ENST00000380249 ERBB4Q15303 1308 aa8.11□□□□□ -1.11
FOCAD-202ENST00000380249 MPRIPQ6WCQ1 1025 aa8.11□□□□□ -1.11
FOCAD-202ENST00000380249 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
FOCAD-202ENST00000380249 ZNF521Q96K83 1311 aa8.1□□□□□ -1.11
FOCAD-202ENST00000380249 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms