RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 CRB1P82279 1406 aa19.2■□□□□ 0.66
SNX2-201ENST00000379516 PDE4AP27815 886 aa19.19■□□□□ 0.66
SNX2-201ENST00000379516 CADPS2Q86UW7 1296 aa19.19■□□□□ 0.66
SNX2-201ENST00000379516 ARHGEF25Q86VW2 580 aa19.19■□□□□ 0.66
SNX2-201ENST00000379516 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
SNX2-201ENST00000379516 NBPF6Q5VWK0 638 aa19.18■□□□□ 0.66
SNX2-201ENST00000379516 ARHGAP45Q92619 1136 aa19.18■□□□□ 0.66
SNX2-201ENST00000379516 NBPF4Q96M43 638 aa19.18■□□□□ 0.66
SNX2-201ENST00000379516 USP19O94966 1318 aa19.17■□□□□ 0.66
SNX2-201ENST00000379516 SLIT3O75094 1523 aa19.17■□□□□ 0.66
SNX2-201ENST00000379516 TRPM3Q9HCF6 1732 aaPredicted RBP19.17■□□□□ 0.66
SNX2-201ENST00000379516 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
SNX2-201ENST00000379516 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
SNX2-201ENST00000379516 DDX17Q92841 729 aaKnown RBP19.17■□□□□ 0.66
SNX2-201ENST00000379516 MIS18AQ9NYP9 233 aa19.17■□□□□ 0.66
SNX2-201ENST00000379516 LMTK3Q96Q04 1460 aa19.17■□□□□ 0.66
SNX2-201ENST00000379516 RGS3P49796 1198 aa19.16■□□□□ 0.66
SNX2-201ENST00000379516 HAP1P54257 671 aaPredicted RBP19.16■□□□□ 0.66
SNX2-201ENST00000379516 RWDD1Q9H446 243 aaPredicted RBP19.16■□□□□ 0.66
SNX2-201ENST00000379516 MSH6P52701 1360 aa19.16■□□□□ 0.66
SNX2-201ENST00000379516 BACH2Q9BYV9 841 aa19.16■□□□□ 0.66
SNX2-201ENST00000379516 TSPYL4Q9UJ04 414 aa19.16■□□□□ 0.66
SNX2-201ENST00000379516 KIAA0232Q92628 1395 aa19.15■□□□□ 0.66
SNX2-201ENST00000379516 LRRC59Q96AG4 307 aaKnown RBP19.14■□□□□ 0.65
SNX2-201ENST00000379516 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
SNX2-201ENST00000379516 PHRF1Q9P1Y6 1649 aaKnown RBP19.13■□□□□ 0.65
SNX2-201ENST00000379516 NPHP3Q7Z494 1330 aa19.12■□□□□ 0.65
SNX2-201ENST00000379516 ANKRD24Q8TF21 1146 aa19.12■□□□□ 0.65
SNX2-201ENST00000379516 ZBTB40Q9NUA8 1239 aa19.12■□□□□ 0.65
SNX2-201ENST00000379516 ZC3H6P61129 1189 aaKnown RBP19.11■□□□□ 0.65
SNX2-201ENST00000379516 IL17REQ8NFR9 667 aa19.11■□□□□ 0.65
SNX2-201ENST00000379516 API5Q9BZZ5 524 aaKnown RBP19.11■□□□□ 0.65
SNX2-201ENST00000379516 AXIN2Q9Y2T1 843 aa19.1■□□□□ 0.65
SNX2-201ENST00000379516 ABCC4O15439 1325 aa19.09■□□□□ 0.65
SNX2-201ENST00000379516 ALS2Q96Q42 1657 aa19.09■□□□□ 0.65
SNX2-201ENST00000379516 STRCQ7RTU9 1775 aa19.09■□□□□ 0.65
SNX2-201ENST00000379516 CHMP4BQ9H444 224 aaKnown RBP19.08■□□□□ 0.64
SNX2-201ENST00000379516 ZNF335Q9H4Z2 1342 aaPredicted RBP19.08■□□□□ 0.64
SNX2-201ENST00000379516 ZBTB7BO15156 539 aaPredicted RBP19.07■□□□□ 0.64
SNX2-201ENST00000379516 HDAC1Q13547 482 aaPredicted RBP19.07■□□□□ 0.64
SNX2-201ENST00000379516 TAF7Q15545 349 aaPredicted RBP19.07■□□□□ 0.64
SNX2-201ENST00000379516 MED1Q15648 1581 aaPredicted RBP19.07■□□□□ 0.64
SNX2-201ENST00000379516 ANP32AP39687 249 aaKnown RBP19.07■□□□□ 0.64
SNX2-201ENST00000379516 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
SNX2-201ENST00000379516 FAM161AQ3B820 660 aa19.06■□□□□ 0.64
SNX2-201ENST00000379516 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
SNX2-201ENST00000379516 LRRC37A3O60309 1634 aa19.06■□□□□ 0.64
SNX2-201ENST00000379516 MSH5O43196 834 aa19.06■□□□□ 0.64
SNX2-201ENST00000379516 TNS3Q68CZ2 1445 aa19.05■□□□□ 0.64
SNX2-201ENST00000379516 SLC4A2P04920 1241 aa19.05■□□□□ 0.64
SNX2-201ENST00000379516 CABLES1Q8TDN4 633 aa19.05■□□□□ 0.64
SNX2-201ENST00000379516 RGPD2P0DJD1 1756 aa19.05■□□□□ 0.64
SNX2-201ENST00000379516 ZNF530Q6P9A1 599 aaPredicted RBP19.04■□□□□ 0.64
SNX2-201ENST00000379516 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
SNX2-201ENST00000379516 BABAM1Q9NWV8 329 aa19.04■□□□□ 0.64
SNX2-201ENST00000379516 AMOTQ4VCS5 1084 aa19.04■□□□□ 0.64
SNX2-201ENST00000379516 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
SNX2-201ENST00000379516 SPATA31A3Q5VYP0 1347 aa19.04■□□□□ 0.64
SNX2-201ENST00000379516 XIRP1Q702N8 1843 aaKnown RBP19.03■□□□□ 0.64
SNX2-201ENST00000379516 AKAP4Q5JQC9 854 aa19.03■□□□□ 0.64
SNX2-201ENST00000379516 LGR6Q9HBX8 967 aa19.03■□□□□ 0.64
SNX2-201ENST00000379516 NCAPD2Q15021 1401 aa19.03■□□□□ 0.64
SNX2-201ENST00000379516 ERBB3P21860 1342 aa19.03■□□□□ 0.64
SNX2-201ENST00000379516 PXDNQ92626 1479 aa19.03■□□□□ 0.64
SNX2-201ENST00000379516 C8orf34Q49A92 452 aa19.03■□□□□ 0.64
SNX2-201ENST00000379516 PTPRCP08575 1304 aa19.02■□□□□ 0.64
SNX2-201ENST00000379516 CEMIPQ8WUJ3 1361 aa19.02■□□□□ 0.64
SNX2-201ENST00000379516 C1orf115Q9H7X2 142 aa19.01■□□□□ 0.63
SNX2-201ENST00000379516 SLAIN2Q9P270 581 aa19.01■□□□□ 0.63
SNX2-201ENST00000379516 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
SNX2-201ENST00000379516 INTS3Q68E01 1043 aaKnown RBP19■□□□□ 0.63
SNX2-201ENST00000379516 STK31Q9BXU1 1019 aa19■□□□□ 0.63
SNX2-201ENST00000379516 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
SNX2-201ENST00000379516 SMC5Q8IY18 1101 aa19■□□□□ 0.63
SNX2-201ENST00000379516 RGS12O14924 1447 aa18.99■□□□□ 0.63
SNX2-201ENST00000379516 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
SNX2-201ENST00000379516 NLRP2Q9NX02 1062 aa18.99■□□□□ 0.63
SNX2-201ENST00000379516 TEFQ10587 303 aa18.98■□□□□ 0.63
SNX2-201ENST00000379516 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
SNX2-201ENST00000379516 G2E3Q7L622 706 aa18.98■□□□□ 0.63
SNX2-201ENST00000379516 NECTIN2Q92692 538 aa18.98■□□□□ 0.63
SNX2-201ENST00000379516 CSB-PGBD3P0DP91 1061 aa18.97■□□□□ 0.63
SNX2-201ENST00000379516 SOS1Q07889 1333 aaPredicted RBP18.97■□□□□ 0.63
SNX2-201ENST00000379516 RGPD5Q99666 1765 aa18.97■□□□□ 0.63
SNX2-201ENST00000379516 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
SNX2-201ENST00000379516 IPO9Q96P70 1041 aaKnown RBP18.97■□□□□ 0.63
SNX2-201ENST00000379516 RNMTO43148 476 aaKnown RBP18.96■□□□□ 0.63
SNX2-201ENST00000379516 RAPGEF4Q8WZA2 1011 aa18.95■□□□□ 0.62
SNX2-201ENST00000379516 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
SNX2-201ENST00000379516 BTBD11A6QL63 1104 aa18.95■□□□□ 0.62
SNX2-201ENST00000379516 SOS2Q07890 1332 aaPredicted RBP18.94■□□□□ 0.62
SNX2-201ENST00000379516 F6X3S4 739 aa18.94■□□□□ 0.62
SNX2-201ENST00000379516 EIF4A1P60842 406 aaKnown RBP18.94■□□□□ 0.62
SNX2-201ENST00000379516 SLC4A10Q6U841 1118 aa18.94■□□□□ 0.62
SNX2-201ENST00000379516 SIRT2Q8IXJ6 389 aa18.94■□□□□ 0.62
SNX2-201ENST00000379516 FLIIQ13045 1269 aa18.93■□□□□ 0.62
SNX2-201ENST00000379516 HDGFL1Q5TGJ6 251 aa18.93■□□□□ 0.62
SNX2-201ENST00000379516 CPDO75976 1380 aa18.93■□□□□ 0.62
SNX2-201ENST00000379516 KCNQ3O43525 872 aa18.92■□□□□ 0.62
SNX2-201ENST00000379516 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms