RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 NUP188Q5SRE5 1749 aa32.37■■■□□ 2.77
SDHAF1-201ENST00000378887 EN1Q05925 392 aaPredicted RBP32.36■■■□□ 2.77
SDHAF1-201ENST00000378887 DOT1LQ8TEK3 1739 aa32.34■■■□□ 2.77
SDHAF1-201ENST00000378887 TOGARAM1Q9Y4F4 1720 aa32.34■■■□□ 2.77
SDHAF1-201ENST00000378887 KCNQ2O43526 872 aa32.32■■■□□ 2.76
SDHAF1-201ENST00000378887 BCL11BQ9C0K0 894 aaPredicted RBP32.32■■■□□ 2.76
SDHAF1-201ENST00000378887 BTAF1O14981 1849 aa32.32■■■□□ 2.76
SDHAF1-201ENST00000378887 IL13P35225 146 aa32.31■■■□□ 2.76
SDHAF1-201ENST00000378887 BAG6P46379 1132 aa32.31■■■□□ 2.76
SDHAF1-201ENST00000378887 MTHFSP49914 203 aa32.3■■■□□ 2.76
SDHAF1-201ENST00000378887 EZH2Q15910 746 aaKnown RBP32.3■■■□□ 2.76
SDHAF1-201ENST00000378887 ZCRB1Q8TBF4 217 aaKnown RBP32.3■■■□□ 2.76
SDHAF1-201ENST00000378887 KDRP35968 1356 aa32.3■■■□□ 2.76
SDHAF1-201ENST00000378887 PARD3Q8TEW0 1356 aa32.29■■■□□ 2.76
SDHAF1-201ENST00000378887 PLEKHG2Q9H7P9 1386 aa32.29■■■□□ 2.76
SDHAF1-201ENST00000378887 APBA3O96018 575 aa32.28■■■□□ 2.76
SDHAF1-201ENST00000378887 SF3B2Q13435 895 aaKnown RBP32.28■■■□□ 2.76
SDHAF1-201ENST00000378887 CYP27B1O15528 508 aa32.27■■■□□ 2.76
SDHAF1-201ENST00000378887 PROM2Q8N271 834 aa32.25■■■□□ 2.75
SDHAF1-201ENST00000378887 RAPGEF4Q8WZA2 1011 aa32.25■■■□□ 2.75
SDHAF1-201ENST00000378887 AEBP1Q8IUX7 1158 aa32.24■■■□□ 2.75
SDHAF1-201ENST00000378887 DDX54Q8TDD1 881 aaKnown RBP32.24■■■□□ 2.75
SDHAF1-201ENST00000378887 PLSCR1O15162 318 aa32.23■■■□□ 2.75
SDHAF1-201ENST00000378887 TATP17735 454 aaPredicted RBP32.23■■■□□ 2.75
SDHAF1-201ENST00000378887 ACSBG1Q96GR2 724 aa32.22■■■□□ 2.75
SDHAF1-201ENST00000378887 PAPPAQ13219 1627 aa32.21■■■□□ 2.75
SDHAF1-201ENST00000378887 ZEB1P37275 1124 aaPredicted RBP32.2■■■□□ 2.75
SDHAF1-201ENST00000378887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.2■■■□□ 2.75
SDHAF1-201ENST00000378887 ITGB4P16144 1822 aa32.19■■■□□ 2.74
SDHAF1-201ENST00000378887 NKX1-1Q15270 411 aaPredicted RBP32.18■■■□□ 2.74
SDHAF1-201ENST00000378887 PCDH11XQ9BZA7 1347 aa32.18■■■□□ 2.74
SDHAF1-201ENST00000378887 PCDH11YQ9BZA8 1340 aa32.18■■■□□ 2.74
SDHAF1-201ENST00000378887 LY75O60449 1722 aa32.17■■■□□ 2.74
SDHAF1-201ENST00000378887 PPP2R1AP30153 589 aa32.15■■■□□ 2.74
SDHAF1-201ENST00000378887 KAT6BQ8WYB5 2073 aa32.12■■■□□ 2.73
SDHAF1-201ENST00000378887 CNGB1Q14028 1251 aaPredicted RBP32.12■■■□□ 2.73
SDHAF1-201ENST00000378887 PRIM1P49642 420 aaKnown RBP32.11■■■□□ 2.73
SDHAF1-201ENST00000378887 PHKG2P15735 406 aa32.1■■■□□ 2.73
SDHAF1-201ENST00000378887 SULT6B1Q6IMI4 303 aa32.09■■■□□ 2.73
SDHAF1-201ENST00000378887 ANO8Q9HCE9 1232 aaPredicted RBP32.09■■■□□ 2.73
SDHAF1-201ENST00000378887 KDM6AO15550 1401 aaPredicted RBP32.09■■■□□ 2.73
SDHAF1-201ENST00000378887 ADAMTS7Q9UKP4 1686 aa32.08■■■□□ 2.73
SDHAF1-201ENST00000378887 DDX10Q13206 875 aaKnown RBP32.07■■■□□ 2.72
SDHAF1-201ENST00000378887 DIAPH1O60610 1272 aaKnown RBP32.06■■■□□ 2.72
SDHAF1-201ENST00000378887 TXNRD1Q16881 649 aa32.06■■■□□ 2.72
SDHAF1-201ENST00000378887 SPG7Q9UQ90 795 aa32.06■■■□□ 2.72
SDHAF1-201ENST00000378887 LRRC4BQ9NT99 713 aa32.05■■■□□ 2.72
SDHAF1-201ENST00000378887 CASZ1Q86V15 1759 aa32.04■■■□□ 2.72
SDHAF1-201ENST00000378887 PSDA5PKW4 1024 aaPredicted RBP32.01■■■□□ 2.71
SDHAF1-201ENST00000378887 SCN11AQ9UI33 1791 aa32.01■■■□□ 2.71
SDHAF1-201ENST00000378887 HMOX1P09601 288 aa32■■■□□ 2.71
SDHAF1-201ENST00000378887 IFNL2Q8IZJ0 200 aa32■■■□□ 2.71
SDHAF1-201ENST00000378887 VIRMAQ69YN4 1812 aaKnown RBP31.98■■■□□ 2.71
SDHAF1-201ENST00000378887 LRP5O75197 1615 aa31.98■■■□□ 2.71
SDHAF1-201ENST00000378887 R3HDM1Q15032 1099 aaKnown RBP31.98■■■□□ 2.71
SDHAF1-201ENST00000378887 PIGBQ92521 554 aa31.97■■■□□ 2.71
SDHAF1-201ENST00000378887 TUBGCP6Q96RT7 1819 aa31.97■■■□□ 2.71
SDHAF1-201ENST00000378887 AMOTQ4VCS5 1084 aa31.96■■■□□ 2.71
SDHAF1-201ENST00000378887 PLEKHO1Q53GL0 409 aaPredicted RBP31.96■■■□□ 2.71
SDHAF1-201ENST00000378887 TAF1LQ8IZX4 1826 aa31.96■■■□□ 2.71
SDHAF1-201ENST00000378887 SYTL4Q96C24 671 aaPredicted RBP31.95■■■□□ 2.71
SDHAF1-201ENST00000378887 MRC1P22897 1456 aa31.95■■■□□ 2.7
SDHAF1-201ENST00000378887 ZNF530Q6P9A1 599 aaPredicted RBP31.94■■■□□ 2.7
SDHAF1-201ENST00000378887 QSER1Q2KHR3 1735 aa31.93■■■□□ 2.7
SDHAF1-201ENST00000378887 RSPH6AQ9H0K4 717 aa31.93■■■□□ 2.7
SDHAF1-201ENST00000378887 ZNF827Q17R98 1081 aa31.91■■■□□ 2.7
SDHAF1-201ENST00000378887 C5P01031 1676 aa31.9■■■□□ 2.7
SDHAF1-201ENST00000378887 KCNQ4P56696 695 aa31.9■■■□□ 2.7
SDHAF1-201ENST00000378887 MTHFSDQ2M296 383 aaKnown RBP31.9■■■□□ 2.7
SDHAF1-201ENST00000378887 PDGFDQ9GZP0 370 aaPredicted RBP31.9■■■□□ 2.7
SDHAF1-201ENST00000378887 MPRIPQ6WCQ1 1025 aa31.89■■■□□ 2.7
SDHAF1-201ENST00000378887 DCAF5Q96JK2 942 aa31.89■■■□□ 2.7
SDHAF1-201ENST00000378887 PALLDQ8WX93 1383 aa31.89■■■□□ 2.7
SDHAF1-201ENST00000378887 SLC27A3Q5K4L6 730 aa31.88■■■□□ 2.69
SDHAF1-201ENST00000378887 AKT1S1Q96B36 256 aa31.88■■■□□ 2.69
SDHAF1-201ENST00000378887 ZNF831Q5JPB2 1677 aa31.88■■■□□ 2.69
SDHAF1-201ENST00000378887 RALBP1Q15311 655 aa31.87■■■□□ 2.69
SDHAF1-201ENST00000378887 ERVV-2B6SEH9 535 aa31.86■■■□□ 2.69
SDHAF1-201ENST00000378887 PHACTR3Q96KR7 559 aa31.86■■■□□ 2.69
SDHAF1-201ENST00000378887 U2SURPO15042 1029 aaKnown RBP31.85■■■□□ 2.69
SDHAF1-201ENST00000378887 CFAP53Q96M91 514 aa31.85■■■□□ 2.69
SDHAF1-201ENST00000378887 SIPA1L3O60292 1781 aaPredicted RBP31.85■■■□□ 2.69
SDHAF1-201ENST00000378887 SLC15A2Q16348 729 aa31.84■■■□□ 2.69
SDHAF1-201ENST00000378887 AKAP4Q5JQC9 854 aa31.84■■■□□ 2.69
SDHAF1-201ENST00000378887 ASAP1Q9ULH1 1129 aa31.84■■■□□ 2.69
SDHAF1-201ENST00000378887 CICQ96RK0 1608 aaPredicted RBP31.84■■■□□ 2.69
SDHAF1-201ENST00000378887 NBPF14Q5TI25 921 aa31.83■■■□□ 2.69
SDHAF1-201ENST00000378887 ATG3Q9NT62 314 aa31.83■■■□□ 2.69
SDHAF1-201ENST00000378887 HSP90AB1P08238 724 aaKnown RBP31.82■■■□□ 2.68
SDHAF1-201ENST00000378887 SLC4A9Q96Q91 983 aa31.82■■■□□ 2.68
SDHAF1-201ENST00000378887 LGR6Q9HBX8 967 aa31.82■■■□□ 2.68
SDHAF1-201ENST00000378887 COL24A1Q17RW2 1714 aa31.81■■■□□ 2.68
SDHAF1-201ENST00000378887 PRKRIP1Q9H875 184 aaPredicted RBP31.81■■■□□ 2.68
SDHAF1-201ENST00000378887 ZNF316A6NFI3 1004 aaPredicted RBP31.8■■■□□ 2.68
SDHAF1-201ENST00000378887 PRKAR2BP31323 418 aa31.8■■■□□ 2.68
SDHAF1-201ENST00000378887 TMOD3Q9NYL9 352 aa31.8■■■□□ 2.68
SDHAF1-201ENST00000378887 C4BP0C0L5 1744 aa31.8■■■□□ 2.68
SDHAF1-201ENST00000378887 COL5A3P25940 1745 aaPredicted RBP31.79■■■□□ 2.68
SDHAF1-201ENST00000378887 MYBBP1AQ9BQG0 1328 aaKnown RBP31.78■■■□□ 2.68
SDHAF1-201ENST00000378887 CCNL1Q9UK58 526 aaPredicted RBP31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms