RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 CRB1P82279 1406 aa18.78■□□□□ 0.6
RAB3IP-203ENST00000378809 HAP1P54257 671 aaPredicted RBP18.78■□□□□ 0.6
RAB3IP-203ENST00000378809 TSPYL4Q9UJ04 414 aa18.78■□□□□ 0.6
RAB3IP-203ENST00000378809 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
RAB3IP-203ENST00000378809 ANP32AP39687 249 aaKnown RBP18.78■□□□□ 0.6
RAB3IP-203ENST00000378809 KIF1AQ12756 1690 aa18.77■□□□□ 0.6
RAB3IP-203ENST00000378809 MST1RQ04912 1400 aa18.77■□□□□ 0.59
RAB3IP-203ENST00000378809 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
RAB3IP-203ENST00000378809 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
RAB3IP-203ENST00000378809 CADPS2Q86UW7 1296 aa18.76■□□□□ 0.59
RAB3IP-203ENST00000378809 ARHGAP45Q92619 1136 aa18.76■□□□□ 0.59
RAB3IP-203ENST00000378809 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
RAB3IP-203ENST00000378809 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
RAB3IP-203ENST00000378809 KDM4FA0A1W2PPD8 638 aa18.75■□□□□ 0.59
RAB3IP-203ENST00000378809 HTATSF1O43719 755 aaKnown RBP18.75■□□□□ 0.59
RAB3IP-203ENST00000378809 ARHGEF25Q86VW2 580 aa18.75■□□□□ 0.59
RAB3IP-203ENST00000378809 STRCP1A6NGW2 1772 aa18.75■□□□□ 0.59
RAB3IP-203ENST00000378809 LRRC59Q96AG4 307 aaKnown RBP18.74■□□□□ 0.59
RAB3IP-203ENST00000378809 DCCP43146 1447 aa18.74■□□□□ 0.59
RAB3IP-203ENST00000378809 MSH6P52701 1360 aa18.74■□□□□ 0.59
RAB3IP-203ENST00000378809 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
RAB3IP-203ENST00000378809 MAP3K5Q99683 1374 aa18.74■□□□□ 0.59
RAB3IP-203ENST00000378809 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
RAB3IP-203ENST00000378809 USP19O94966 1318 aa18.73■□□□□ 0.59
RAB3IP-203ENST00000378809 MSH5O43196 834 aa18.73■□□□□ 0.59
RAB3IP-203ENST00000378809 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
RAB3IP-203ENST00000378809 ZBTB40Q9NUA8 1239 aa18.73■□□□□ 0.59
RAB3IP-203ENST00000378809 SLIT3O75094 1523 aa18.73■□□□□ 0.59
RAB3IP-203ENST00000378809 FAM161AQ3B820 660 aa18.72■□□□□ 0.59
RAB3IP-203ENST00000378809 TRPM3Q9HCF6 1732 aaPredicted RBP18.72■□□□□ 0.59
RAB3IP-203ENST00000378809 ZC3H6P61129 1189 aaKnown RBP18.71■□□□□ 0.59
RAB3IP-203ENST00000378809 ANKRD24Q8TF21 1146 aa18.71■□□□□ 0.59
RAB3IP-203ENST00000378809 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
RAB3IP-203ENST00000378809 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
RAB3IP-203ENST00000378809 ABCC4O15439 1325 aa18.7■□□□□ 0.58
RAB3IP-203ENST00000378809 NPHP3Q7Z494 1330 aa18.7■□□□□ 0.58
RAB3IP-203ENST00000378809 LMTK3Q96Q04 1460 aa18.7■□□□□ 0.58
RAB3IP-203ENST00000378809 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
RAB3IP-203ENST00000378809 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
RAB3IP-203ENST00000378809 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
RAB3IP-203ENST00000378809 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
RAB3IP-203ENST00000378809 ZBTB7BO15156 539 aaPredicted RBP18.67■□□□□ 0.58
RAB3IP-203ENST00000378809 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
RAB3IP-203ENST00000378809 PHRF1Q9P1Y6 1649 aaKnown RBP18.67■□□□□ 0.58
RAB3IP-203ENST00000378809 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
RAB3IP-203ENST00000378809 C8orf34Q49A92 452 aa18.67■□□□□ 0.58
RAB3IP-203ENST00000378809 C1orf115Q9H7X2 142 aa18.67■□□□□ 0.58
RAB3IP-203ENST00000378809 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
RAB3IP-203ENST00000378809 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
RAB3IP-203ENST00000378809 CABLES1Q8TDN4 633 aa18.65■□□□□ 0.58
RAB3IP-203ENST00000378809 LRRC37A3O60309 1634 aa18.64■□□□□ 0.58
RAB3IP-203ENST00000378809 IPO9Q96P70 1041 aaKnown RBP18.64■□□□□ 0.58
RAB3IP-203ENST00000378809 ZNF335Q9H4Z2 1342 aaPredicted RBP18.64■□□□□ 0.57
RAB3IP-203ENST00000378809 ALS2Q96Q42 1657 aa18.64■□□□□ 0.57
RAB3IP-203ENST00000378809 STK31Q9BXU1 1019 aa18.64■□□□□ 0.57
RAB3IP-203ENST00000378809 PTPRCP08575 1304 aa18.64■□□□□ 0.57
RAB3IP-203ENST00000378809 MED1Q15648 1581 aaPredicted RBP18.63■□□□□ 0.57
RAB3IP-203ENST00000378809 AMOTQ4VCS5 1084 aa18.63■□□□□ 0.57
RAB3IP-203ENST00000378809 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
RAB3IP-203ENST00000378809 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
RAB3IP-203ENST00000378809 TNS3Q68CZ2 1445 aa18.63■□□□□ 0.57
RAB3IP-203ENST00000378809 RGPD2P0DJD1 1756 aa18.63■□□□□ 0.57
RAB3IP-203ENST00000378809 ERBB3P21860 1342 aa18.62■□□□□ 0.57
RAB3IP-203ENST00000378809 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
RAB3IP-203ENST00000378809 LGR6Q9HBX8 967 aa18.62■□□□□ 0.57
RAB3IP-203ENST00000378809 TEFQ10587 303 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 SMC5Q8IY18 1101 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 NLRP2Q9NX02 1062 aa18.61■□□□□ 0.57
RAB3IP-203ENST00000378809 CEMIPQ8WUJ3 1361 aa18.6■□□□□ 0.57
RAB3IP-203ENST00000378809 SPATA31A3Q5VYP0 1347 aa18.6■□□□□ 0.57
RAB3IP-203ENST00000378809 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
RAB3IP-203ENST00000378809 INTS3Q68E01 1043 aaKnown RBP18.6■□□□□ 0.57
RAB3IP-203ENST00000378809 G2E3Q7L622 706 aa18.6■□□□□ 0.57
RAB3IP-203ENST00000378809 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
RAB3IP-203ENST00000378809 RGS12O14924 1447 aa18.6■□□□□ 0.57
RAB3IP-203ENST00000378809 SLC4A10Q6U841 1118 aa18.59■□□□□ 0.57
RAB3IP-203ENST00000378809 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
RAB3IP-203ENST00000378809 PXDNQ92626 1479 aa18.59■□□□□ 0.57
RAB3IP-203ENST00000378809 ZBTB47Q9UFB7 747 aaPredicted RBP18.58■□□□□ 0.56
RAB3IP-203ENST00000378809 NCAPD2Q15021 1401 aa18.58■□□□□ 0.56
RAB3IP-203ENST00000378809 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
RAB3IP-203ENST00000378809 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
RAB3IP-203ENST00000378809 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
RAB3IP-203ENST00000378809 F6X3S4 739 aa18.57■□□□□ 0.56
RAB3IP-203ENST00000378809 HDGFL1Q5TGJ6 251 aa18.56■□□□□ 0.56
RAB3IP-203ENST00000378809 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
RAB3IP-203ENST00000378809 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
RAB3IP-203ENST00000378809 FLIIQ13045 1269 aa18.56■□□□□ 0.56
RAB3IP-203ENST00000378809 FKBP5Q13451 457 aaPredicted RBP18.56■□□□□ 0.56
RAB3IP-203ENST00000378809 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
RAB3IP-203ENST00000378809 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
RAB3IP-203ENST00000378809 NUCB1Q02818 461 aa18.55■□□□□ 0.56
RAB3IP-203ENST00000378809 GCC1Q96CN9 775 aa18.55■□□□□ 0.56
RAB3IP-203ENST00000378809 EIF2S2P20042 333 aaKnown RBP18.54■□□□□ 0.56
RAB3IP-203ENST00000378809 ANKRD45Q5TZF3 282 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms