RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 NSFL1CQ9UNZ2 370 aaKnown RBP16.67■□□□□ 0.26
KIF3A-201ENST00000378735 ANKRD26Q9UPS8 1709 aa16.67■□□□□ 0.26
KIF3A-201ENST00000378735 REC8O95072 547 aa16.66■□□□□ 0.26
KIF3A-201ENST00000378735 BRD1O95696 1058 aa16.66■□□□□ 0.26
KIF3A-201ENST00000378735 MRPL50Q8N5N7 158 aaKnown RBP16.66■□□□□ 0.26
KIF3A-201ENST00000378735 RNF214Q8ND24 703 aa16.66■□□□□ 0.26
KIF3A-201ENST00000378735 CBX1P83916 185 aa16.65■□□□□ 0.26
KIF3A-201ENST00000378735 DCTPP1Q9H773 170 aa16.65■□□□□ 0.26
KIF3A-201ENST00000378735 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
KIF3A-201ENST00000378735 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
KIF3A-201ENST00000378735 DIAPH3Q9NSV4 1193 aa16.65■□□□□ 0.26
KIF3A-201ENST00000378735 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
KIF3A-201ENST00000378735 ZFYVE9O95405 1425 aa16.64■□□□□ 0.25
KIF3A-201ENST00000378735 ATP2B3Q16720 1220 aa16.64■□□□□ 0.25
KIF3A-201ENST00000378735 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
KIF3A-201ENST00000378735 INTS4Q96HW7 963 aaKnown RBP16.63■□□□□ 0.25
KIF3A-201ENST00000378735 FEZ1Q99689 392 aa16.63■□□□□ 0.25
KIF3A-201ENST00000378735 PDCL2Q8N4E4 241 aa16.63■□□□□ 0.25
KIF3A-201ENST00000378735 ANKRD7Q92527 254 aa16.63■□□□□ 0.25
KIF3A-201ENST00000378735 C1orf115Q9H7X2 142 aa16.63■□□□□ 0.25
KIF3A-201ENST00000378735 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
KIF3A-201ENST00000378735 EVC2Q86UK5 1308 aa16.63■□□□□ 0.25
KIF3A-201ENST00000378735 TPM3P06753 285 aa16.62■□□□□ 0.25
KIF3A-201ENST00000378735 CUL4AQ13619 759 aa16.62■□□□□ 0.25
KIF3A-201ENST00000378735 VAMP4O75379 141 aa16.62■□□□□ 0.25
KIF3A-201ENST00000378735 NEXMIFQ5QGS0 1516 aa16.62■□□□□ 0.25
KIF3A-201ENST00000378735 API5Q9BZZ5 524 aaKnown RBP16.61■□□□□ 0.25
KIF3A-201ENST00000378735 TRAK1Q9UPV9 953 aa16.61■□□□□ 0.25
KIF3A-201ENST00000378735 TULP4Q9NRJ4 1543 aa16.61■□□□□ 0.25
KIF3A-201ENST00000378735 KNDC1Q76NI1 1749 aa16.61■□□□□ 0.25
KIF3A-201ENST00000378735 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
KIF3A-201ENST00000378735 SPATA31D1Q6ZQQ2 1576 aa16.61■□□□□ 0.25
KIF3A-201ENST00000378735 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
KIF3A-201ENST00000378735 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
KIF3A-201ENST00000378735 CHAF1AQ13111 956 aaPredicted RBP16.6■□□□□ 0.25
KIF3A-201ENST00000378735 CTIFO43310 598 aaKnown RBP16.6■□□□□ 0.25
KIF3A-201ENST00000378735 FCHSD2O94868 740 aa16.6■□□□□ 0.25
KIF3A-201ENST00000378735 ERC2O15083 957 aa16.59■□□□□ 0.25
KIF3A-201ENST00000378735 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
KIF3A-201ENST00000378735 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
KIF3A-201ENST00000378735 SDSP20132 328 aa16.59■□□□□ 0.25
KIF3A-201ENST00000378735 SYCP1Q15431 976 aa16.59■□□□□ 0.25
KIF3A-201ENST00000378735 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
KIF3A-201ENST00000378735 TSC1Q92574 1164 aa16.58■□□□□ 0.25
KIF3A-201ENST00000378735 ADCY5O95622 1261 aa16.58■□□□□ 0.24
KIF3A-201ENST00000378735 ARHGEF28Q8N1W1 1705 aaKnown RBP16.58■□□□□ 0.24
KIF3A-201ENST00000378735 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
KIF3A-201ENST00000378735 CCDC183Q5T5S1 534 aa16.57■□□□□ 0.24
KIF3A-201ENST00000378735 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
KIF3A-201ENST00000378735 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
KIF3A-201ENST00000378735 KIAA1524Q8TCG1 905 aa16.57■□□□□ 0.24
KIF3A-201ENST00000378735 OGFRQ9NZT2 677 aa16.57■□□□□ 0.24
KIF3A-201ENST00000378735 RPAP2Q8IXW5 612 aaPredicted RBP16.56■□□□□ 0.24
KIF3A-201ENST00000378735 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
KIF3A-201ENST00000378735 IL17RAQ96F46 866 aa16.56■□□□□ 0.24
KIF3A-201ENST00000378735 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
KIF3A-201ENST00000378735 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
KIF3A-201ENST00000378735 LRRC7Q96NW7 1537 aa16.56■□□□□ 0.24
KIF3A-201ENST00000378735 GNAI1P63096 354 aa16.56■□□□□ 0.24
KIF3A-201ENST00000378735 GABPB1Q06547 395 aaPredicted RBP16.56■□□□□ 0.24
KIF3A-201ENST00000378735 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
KIF3A-201ENST00000378735 ANAPC15P60006 121 aa16.55■□□□□ 0.24
KIF3A-201ENST00000378735 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
KIF3A-201ENST00000378735 KDM4AO75164 1064 aa16.55■□□□□ 0.24
KIF3A-201ENST00000378735 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
KIF3A-201ENST00000378735 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
KIF3A-201ENST00000378735 BBXQ8WY36 941 aaPredicted RBP16.55■□□□□ 0.24
KIF3A-201ENST00000378735 RTL1A6NKG5 1358 aa16.54■□□□□ 0.24
KIF3A-201ENST00000378735 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
KIF3A-201ENST00000378735 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
KIF3A-201ENST00000378735 NEK4P51957 841 aa16.54■□□□□ 0.24
KIF3A-201ENST00000378735 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
KIF3A-201ENST00000378735 ATP10DQ9P241 1426 aa16.54■□□□□ 0.24
KIF3A-201ENST00000378735 MX1P20591 662 aa16.53■□□□□ 0.24
KIF3A-201ENST00000378735 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
KIF3A-201ENST00000378735 OSBPL3Q9H4L5 887 aa16.53■□□□□ 0.24
KIF3A-201ENST00000378735 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
KIF3A-201ENST00000378735 ZNF853P0CG23 659 aa16.53■□□□□ 0.24
KIF3A-201ENST00000378735 IDI1Q13907 227 aa16.53■□□□□ 0.24
KIF3A-201ENST00000378735 USP48Q86UV5 1035 aa16.52■□□□□ 0.24
KIF3A-201ENST00000378735 MCCP23508 829 aa16.52■□□□□ 0.23
KIF3A-201ENST00000378735 C16orf71Q8IYS4 520 aaPredicted RBP16.52■□□□□ 0.23
KIF3A-201ENST00000378735 MYO5BQ9ULV0 1848 aa16.52■□□□□ 0.23
KIF3A-201ENST00000378735 GOLGA6L6A8MZA4 724 aa16.51■□□□□ 0.23
KIF3A-201ENST00000378735 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
KIF3A-201ENST00000378735 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
KIF3A-201ENST00000378735 FOXD4L5Q5VV16 416 aaPredicted RBP16.51■□□□□ 0.23
KIF3A-201ENST00000378735 FOXD4L4Q8WXT5 416 aaPredicted RBP16.51■□□□□ 0.23
KIF3A-201ENST00000378735 RGS12O14924 1447 aa16.51■□□□□ 0.23
KIF3A-201ENST00000378735 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
KIF3A-201ENST00000378735 SSH2Q76I76 1423 aa16.5■□□□□ 0.23
KIF3A-201ENST00000378735 GADD45BO75293 160 aaPredicted RBP16.5■□□□□ 0.23
KIF3A-201ENST00000378735 U2AF2P26368 475 aaKnown RBP eCLIP16.5■□□□□ 0.233e-8■□□□□ 10.2
KIF3A-201ENST00000378735 C17orf53Q8N3J3 647 aaPredicted RBP16.5■□□□□ 0.23
KIF3A-201ENST00000378735 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
KIF3A-201ENST00000378735 EPB41L2O43491 1005 aaKnown RBP16.49■□□□□ 0.23
KIF3A-201ENST00000378735 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
KIF3A-201ENST00000378735 RPAP1Q9BWH6 1393 aaPredicted RBP16.49■□□□□ 0.23
KIF3A-201ENST00000378735 FYB1O15117 783 aa16.49■□□□□ 0.23
KIF3A-201ENST00000378735 UBE2HP62256 183 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms